RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 SLAIN1Q8ND83 568 aa12.23□□□□□ -0.45
CDC27-215ENST00000573550 TSHZ2Q9NRE2 1034 aa12.23□□□□□ -0.45
CDC27-215ENST00000573550 NCKAP5LQ9HCH0 1330 aa12.22□□□□□ -0.45
CDC27-215ENST00000573550 KIF3CO14782 793 aa12.22□□□□□ -0.45
CDC27-215ENST00000573550 CRISPLD2Q9H0B8 497 aa12.21□□□□□ -0.45
CDC27-215ENST00000573550 C2orf72A6NCS6 295 aa12.19□□□□□ -0.46
CDC27-215ENST00000573550 GPHNQ9NQX3 736 aaPredicted RBP12.18□□□□□ -0.46
CDC27-215ENST00000573550 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
CDC27-215ENST00000573550 TMC2Q8TDI7 906 aa12.17□□□□□ -0.46
CDC27-215ENST00000573550 PDE4AP27815 886 aa12.14□□□□□ -0.47
CDC27-215ENST00000573550 FOXK1P85037 733 aa12.12□□□□□ -0.47
CDC27-215ENST00000573550 MFSD10Q14728 455 aa12.12□□□□□ -0.47
CDC27-215ENST00000573550 DSG2Q14126 1118 aa12.11□□□□□ -0.47
CDC27-215ENST00000573550 LARP6Q9BRS8 491 aaKnown RBP12.11□□□□□ -0.47
CDC27-215ENST00000573550 DDX27Q96GQ7 796 aaKnown RBP12.08□□□□□ -0.48
CDC27-215ENST00000573550 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
CDC27-215ENST00000573550 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
CDC27-215ENST00000573550 HOXB3P14651 431 aaPredicted RBP12.05□□□□□ -0.48
CDC27-215ENST00000573550 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
CDC27-215ENST00000573550 SNPHO15079 494 aa12□□□□□ -0.49
CDC27-215ENST00000573550 DOK7Q18PE1 504 aa11.99□□□□□ -0.49
CDC27-215ENST00000573550 VSIG10Q8N0Z9 540 aa11.99□□□□□ -0.49
CDC27-215ENST00000573550 SLC34A2O95436 690 aa11.98□□□□□ -0.49
CDC27-215ENST00000573550 CAMK2BQ13554 666 aa11.97□□□□□ -0.49
CDC27-215ENST00000573550 WDR70Q9NW82 654 aa11.97□□□□□ -0.49
CDC27-215ENST00000573550 EMILIN3Q9NT22 766 aa11.94□□□□□ -0.5
CDC27-215ENST00000573550 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
CDC27-215ENST00000573550 LCE2DQ5TA82 110 aaPredicted RBP11.93□□□□□ -0.5
CDC27-215ENST00000573550 PTCD2Q8WV60 388 aaKnown RBP11.93□□□□□ -0.5
CDC27-215ENST00000573550 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
CDC27-215ENST00000573550 E2F4Q16254 413 aa11.92□□□□□ -0.5
CDC27-215ENST00000573550 OXER1Q8TDS5 423 aa11.92□□□□□ -0.5
CDC27-215ENST00000573550 ZSWIM6Q9HCJ5 1215 aa11.92□□□□□ -0.5
CDC27-215ENST00000573550 ST18O60284 1047 aa11.91□□□□□ -0.5
CDC27-215ENST00000573550 ZNF710Q8N1W2 664 aa11.91□□□□□ -0.5
CDC27-215ENST00000573550 GPR153Q6NV75 609 aa11.9□□□□□ -0.5
CDC27-215ENST00000573550 FAM163AQ96GL9 167 aaPredicted RBP11.9□□□□□ -0.5
CDC27-215ENST00000573550 PCDHGA4Q9Y5G9 962 aa11.9□□□□□ -0.5
CDC27-215ENST00000573550 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDC27-215ENST00000573550 KCNV2Q8TDN2 545 aa11.88□□□□□ -0.51
CDC27-215ENST00000573550 HOXB1P14653 301 aaPredicted RBP11.87□□□□□ -0.51
CDC27-215ENST00000573550 ARSIQ5FYB1 569 aa11.86□□□□□ -0.51
CDC27-215ENST00000573550 KHSRPQ92945 711 aaKnown RBP eCLIP11.85□□□□□ -0.517e-8■□□□□ 11.3
CDC27-215ENST00000573550 KDM4FA0A1W2PPD8 638 aa11.84□□□□□ -0.51
CDC27-215ENST00000573550 ARIH1Q9Y4X5 557 aaPredicted RBP11.84□□□□□ -0.51
CDC27-215ENST00000573550 DPYSL4O14531 572 aa11.83□□□□□ -0.52
CDC27-215ENST00000573550 TBC1D12O60347 775 aa11.82□□□□□ -0.52
CDC27-215ENST00000573550 P3H3Q8IVL6 736 aa11.82□□□□□ -0.52
CDC27-215ENST00000573550 NUDT7P0C024 238 aa11.81□□□□□ -0.52
CDC27-215ENST00000573550 MAP3K9P80192 1104 aa11.8□□□□□ -0.52
CDC27-215ENST00000573550 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
CDC27-215ENST00000573550 MARVELD3Q96A59 401 aa11.79□□□□□ -0.52
CDC27-215ENST00000573550 EVI5O60447 810 aa11.77□□□□□ -0.53
CDC27-215ENST00000573550 PDIA6Q15084 440 aa11.77□□□□□ -0.53
CDC27-215ENST00000573550 EMP3P54852 163 aa11.74□□□□□ -0.53
CDC27-215ENST00000573550 ANO8Q9HCE9 1232 aaPredicted RBP11.74□□□□□ -0.53
CDC27-215ENST00000573550 LHX6Q9UPM6 363 aa11.72□□□□□ -0.53
CDC27-215ENST00000573550 ZNF316A6NFI3 1004 aaPredicted RBP11.71□□□□□ -0.53
CDC27-215ENST00000573550 SPDYE16A6NNV3 312 aaPredicted RBP11.71□□□□□ -0.53
CDC27-215ENST00000573550 ERBB3P21860 1342 aa11.68□□□□□ -0.54
CDC27-215ENST00000573550 POTEB3A0JP26 581 aa11.68□□□□□ -0.54
CDC27-215ENST00000573550 FAM205CA6NFA0 338 aa11.68□□□□□ -0.54
CDC27-215ENST00000573550 POTEBQ6S5H4 581 aa11.68□□□□□ -0.54
CDC27-215ENST00000573550 POTEMA6NI47 508 aa11.67□□□□□ -0.54
CDC27-215ENST00000573550 PTGER2P43116 358 aa11.67□□□□□ -0.54
CDC27-215ENST00000573550 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
CDC27-215ENST00000573550 HS3ST6Q96QI5 342 aa11.67□□□□□ -0.54
CDC27-215ENST00000573550 VARS2Q5ST30 1063 aaKnown RBP11.66□□□□□ -0.54
CDC27-215ENST00000573550 JPH4Q96JJ6 628 aa11.65□□□□□ -0.54
CDC27-215ENST00000573550 FOSBP53539 338 aa11.64□□□□□ -0.55
CDC27-215ENST00000573550 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
CDC27-215ENST00000573550 SEMA3EO15041 775 aa11.63□□□□□ -0.55
CDC27-215ENST00000573550 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
CDC27-215ENST00000573550 DDX12PQ92771 950 aa11.62□□□□□ -0.55
CDC27-215ENST00000573550 PCDHGA10Q9Y5H3 936 aa11.62□□□□□ -0.55
CDC27-215ENST00000573550 PHF14O94880 888 aa11.6□□□□□ -0.55
CDC27-215ENST00000573550 MLLT3P42568 568 aaPredicted RBP11.6□□□□□ -0.55
CDC27-215ENST00000573550 PPP4R3BQ5MIZ7 849 aa11.59□□□□□ -0.55
CDC27-215ENST00000573550 TESPA1A2RU30 521 aaPredicted RBP11.57□□□□□ -0.56
CDC27-215ENST00000573550 ZNF687Q8N1G0 1237 aa11.57□□□□□ -0.56
CDC27-215ENST00000573550 GRXCR2A6NFK2 248 aa11.56□□□□□ -0.56
CDC27-215ENST00000573550 ZDHHC16Q969W1 377 aa11.56□□□□□ -0.56
CDC27-215ENST00000573550 NBR1Q14596 966 aa11.55□□□□□ -0.56
CDC27-215ENST00000573550 TYW1BQ6NUM6 668 aa11.55□□□□□ -0.56
CDC27-215ENST00000573550 POTEEQ6S8J3 1075 aa11.55□□□□□ -0.56
CDC27-215ENST00000573550 EPAS1Q99814 870 aa11.55□□□□□ -0.56
CDC27-215ENST00000573550 OSBPP22059 807 aa11.54□□□□□ -0.56
CDC27-215ENST00000573550 PRIM1P49642 420 aaKnown RBP11.54□□□□□ -0.56
CDC27-215ENST00000573550 FBXW7Q969H0 707 aa11.54□□□□□ -0.56
CDC27-215ENST00000573550 ADAM33Q9BZ11 813 aa11.54□□□□□ -0.56
CDC27-215ENST00000573550 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
CDC27-215ENST00000573550 EN1Q05925 392 aaPredicted RBP11.51□□□□□ -0.57
CDC27-215ENST00000573550 CDAN1Q8IWY9 1227 aa11.5□□□□□ -0.57
CDC27-215ENST00000573550 PBX2P40425 430 aa11.48□□□□□ -0.57
CDC27-215ENST00000573550 RBM33Q96EV2 1170 aaKnown RBP11.48□□□□□ -0.57
CDC27-215ENST00000573550 KRTAP3-3Q9BYR6 98 aa11.48□□□□□ -0.57
CDC27-215ENST00000573550 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
CDC27-215ENST00000573550 AXIN2Q9Y2T1 843 aa11.48□□□□□ -0.57
CDC27-215ENST00000573550 ARHGAP33O14559 1287 aa11.46□□□□□ -0.57
CDC27-215ENST00000573550 MAP3K7O43318 606 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms