RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 AMER1Q5JTC6 1135 aaPredicted RBP13.68□□□□□ -0.22
NPLOC4-211ENST00000573212 SLC24A1O60721 1099 aa13.67□□□□□ -0.22
NPLOC4-211ENST00000573212 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
NPLOC4-211ENST00000573212 PCF11O94913 1555 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-211ENST00000573212 RANGAP1P46060 587 aaPredicted RBP13.65□□□□□ -0.22
NPLOC4-211ENST00000573212 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
NPLOC4-211ENST00000573212 FANCAO15360 1455 aa13.64□□□□□ -0.23
NPLOC4-211ENST00000573212 HSPA2P54652 639 aa13.64□□□□□ -0.23
NPLOC4-211ENST00000573212 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.63□□□□□ -0.23
NPLOC4-211ENST00000573212 EEA1Q15075 1411 aa13.63□□□□□ -0.23
NPLOC4-211ENST00000573212 YEATS2Q9ULM3 1422 aa13.62□□□□□ -0.23
NPLOC4-211ENST00000573212 MAGI2Q86UL8 1455 aa13.61□□□□□ -0.23
NPLOC4-211ENST00000573212 ARHGEF40Q8TER5 1519 aa13.61□□□□□ -0.23
NPLOC4-211ENST00000573212 POGZQ7Z3K3 1410 aa13.61□□□□□ -0.23
NPLOC4-211ENST00000573212 PLCH2O75038 1416 aa13.6□□□□□ -0.23
NPLOC4-211ENST00000573212 RICTORQ6R327 1708 aa13.6□□□□□ -0.23
NPLOC4-211ENST00000573212 ZMYM4Q5VZL5 1548 aa13.59□□□□□ -0.23
NPLOC4-211ENST00000573212 SCAPERQ9BY12 1400 aa13.58□□□□□ -0.24
NPLOC4-211ENST00000573212 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
NPLOC4-211ENST00000573212 MLECQ14165 292 aa13.58□□□□□ -0.24
NPLOC4-211ENST00000573212 CERKQ8TCT0 537 aa13.58□□□□□ -0.24
NPLOC4-211ENST00000573212 EFCAB2Q5VUJ9 269 aa13.57□□□□□ -0.24
NPLOC4-211ENST00000573212 ZFYVE16Q7Z3T8 1539 aa13.56□□□□□ -0.24
NPLOC4-211ENST00000573212 RIMS1Q86UR5 1692 aaKnown RBP13.56□□□□□ -0.24
NPLOC4-211ENST00000573212 EFCAB5A4FU69 1503 aa13.55□□□□□ -0.24
NPLOC4-211ENST00000573212 TTC37Q6PGP7 1564 aa13.55□□□□□ -0.24
NPLOC4-211ENST00000573212 HECW1Q76N89 1606 aa13.55□□□□□ -0.24
NPLOC4-211ENST00000573212 SIGLEC1Q9BZZ2 1709 aa13.55□□□□□ -0.24
NPLOC4-211ENST00000573212 ATP10AO60312 1499 aa13.55□□□□□ -0.24
NPLOC4-211ENST00000573212 CFAP74Q9C0B2 1584 aa13.54□□□□□ -0.24
NPLOC4-211ENST00000573212 CDK13Q14004 1512 aaKnown RBP13.53□□□□□ -0.24
NPLOC4-211ENST00000573212 CEBPAP49715 358 aaPredicted RBP13.52□□□□□ -0.25
NPLOC4-211ENST00000573212 ARHGEF12Q9NZN5 1544 aa13.51□□□□□ -0.25
NPLOC4-211ENST00000573212 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-211ENST00000573212 AFAP1Q8N556 730 aa13.51□□□□□ -0.25
NPLOC4-211ENST00000573212 CDK11AQ9UQ88 783 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-211ENST00000573212 C9orf84Q5VXU9 1444 aa13.49□□□□□ -0.25
NPLOC4-211ENST00000573212 ATP1B4Q9UN42 357 aaPredicted RBP13.49□□□□□ -0.25
NPLOC4-211ENST00000573212 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
NPLOC4-211ENST00000573212 UBTFP17480 764 aaKnown RBP13.47□□□□□ -0.25
NPLOC4-211ENST00000573212 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
NPLOC4-211ENST00000573212 TROQ12816 1431 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-211ENST00000573212 ZNF518AQ6AHZ1 1483 aa13.44□□□□□ -0.26
NPLOC4-211ENST00000573212 FER1L4A9Z1Z3 1794 aa13.43□□□□□ -0.26
NPLOC4-211ENST00000573212 FKBP8Q14318 412 aa13.42□□□□□ -0.26
NPLOC4-211ENST00000573212 MLH3Q9UHC1 1453 aa13.42□□□□□ -0.26
NPLOC4-211ENST00000573212 KDM5CP41229 1560 aa13.41□□□□□ -0.26
NPLOC4-211ENST00000573212 PTPRTO14522 1441 aa13.4□□□□□ -0.26
NPLOC4-211ENST00000573212 UHRF1BP1Q6BDS2 1440 aa13.4□□□□□ -0.26
NPLOC4-211ENST00000573212 KIF14Q15058 1648 aa13.39□□□□□ -0.27
NPLOC4-211ENST00000573212 ILDR2Q71H61 639 aa13.39□□□□□ -0.27
NPLOC4-211ENST00000573212 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
NPLOC4-211ENST00000573212 REREQ9P2R6 1566 aa13.39□□□□□ -0.27
NPLOC4-211ENST00000573212 TRAPPC8Q9Y2L5 1435 aa13.39□□□□□ -0.27
NPLOC4-211ENST00000573212 PREX1Q8TCU6 1659 aa13.38□□□□□ -0.27
NPLOC4-211ENST00000573212 AGLP35573 1532 aa13.38□□□□□ -0.27
NPLOC4-211ENST00000573212 ARHGAP5Q13017 1502 aa13.38□□□□□ -0.27
NPLOC4-211ENST00000573212 CLIP1P30622 1438 aa13.38□□□□□ -0.27
NPLOC4-211ENST00000573212 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
NPLOC4-211ENST00000573212 DIP2CQ9Y2E4 1556 aa13.37□□□□□ -0.27
NPLOC4-211ENST00000573212 MYO5CQ9NQX4 1742 aa13.37□□□□□ -0.27
NPLOC4-211ENST00000573212 SETD1BQ9UPS6 1966 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-211ENST00000573212 ESF1Q9H501 851 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-211ENST00000573212 DISP3Q9P2K9 1392 aa13.33□□□□□ -0.27
NPLOC4-211ENST00000573212 CASKIN1Q8WXD9 1431 aa13.33□□□□□ -0.28
NPLOC4-211ENST00000573212 SOCS7O14512 581 aa13.33□□□□□ -0.28
NPLOC4-211ENST00000573212 ABCA6Q8N139 1617 aa13.31□□□□□ -0.28
NPLOC4-211ENST00000573212 LTBP4Q8N2S1 1624 aa13.31□□□□□ -0.28
NPLOC4-211ENST00000573212 CNTLNQ9NXG0 1405 aa13.31□□□□□ -0.28
NPLOC4-211ENST00000573212 CDC42BPBQ9Y5S2 1711 aa13.31□□□□□ -0.28
NPLOC4-211ENST00000573212 ABCC1P33527 1531 aa13.31□□□□□ -0.28
NPLOC4-211ENST00000573212 ZMYM3Q14202 1370 aa13.31□□□□□ -0.28
NPLOC4-211ENST00000573212 NCOA1Q15788 1441 aa13.3□□□□□ -0.28
NPLOC4-211ENST00000573212 C3P01024 1663 aa13.3□□□□□ -0.28
NPLOC4-211ENST00000573212 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
NPLOC4-211ENST00000573212 HNRNPMP52272 730 aaKnown RBP eCLIP13.29□□□□□ -0.28
NPLOC4-211ENST00000573212 NPATQ14207 1427 aa13.29□□□□□ -0.28
NPLOC4-211ENST00000573212 CCDC18Q5T9S5 1454 aa13.29□□□□□ -0.28
NPLOC4-211ENST00000573212 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
NPLOC4-211ENST00000573212 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
NPLOC4-211ENST00000573212 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.28
NPLOC4-211ENST00000573212 ZNF777Q9ULD5 760 aaPredicted RBP13.27□□□□□ -0.29
NPLOC4-211ENST00000573212 SPAG9O60271 1321 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-211ENST00000573212 GPATCH8Q9UKJ3 1502 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-211ENST00000573212 NCKAP5LQ9HCH0 1330 aa13.26□□□□□ -0.29
NPLOC4-211ENST00000573212 SAMD9LQ8IVG5 1584 aa13.25□□□□□ -0.29
NPLOC4-211ENST00000573212 KIAA1107Q9UPP5 1409 aa13.25□□□□□ -0.29
NPLOC4-211ENST00000573212 PKD2Q13563 968 aa13.24□□□□□ -0.29
NPLOC4-211ENST00000573212 ITSN2Q9NZM3 1697 aa13.24□□□□□ -0.29
NPLOC4-211ENST00000573212 DCAF8L1A6NGE4 600 aa13.23□□□□□ -0.29
NPLOC4-211ENST00000573212 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
NPLOC4-211ENST00000573212 ZNF335Q9H4Z2 1342 aaPredicted RBP13.22□□□□□ -0.29
NPLOC4-211ENST00000573212 CAMSAP1Q5T5Y3 1602 aa13.22□□□□□ -0.29
NPLOC4-211ENST00000573212 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
NPLOC4-211ENST00000573212 GGT6Q6P531 493 aa13.21□□□□□ -0.29
NPLOC4-211ENST00000573212 FYCO1Q9BQS8 1478 aa13.21□□□□□ -0.3
NPLOC4-211ENST00000573212 CDC42BPAQ5VT25 1732 aa13.2□□□□□ -0.3
NPLOC4-211ENST00000573212 A2MP01023 1474 aa13.2□□□□□ -0.3
NPLOC4-211ENST00000573212 MROH2AA6NES4 1674 aa13.19□□□□□ -0.3
NPLOC4-211ENST00000573212 PLA2R1Q13018 1463 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms