RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 ARHGAP35Q9NRY4 1499 aa34.68■■■■□ 3.14
PKD1-240ENST00000570253 EFCAB2Q5VUJ9 269 aa34.67■■■■□ 3.14
PKD1-240ENST00000570253 YEATS2Q9ULM3 1422 aa34.65■■■■□ 3.14
PKD1-240ENST00000570253 KIF14Q15058 1648 aa34.64■■■■□ 3.14
PKD1-240ENST00000570253 CLIP1P30622 1438 aa34.64■■■■□ 3.14
PKD1-240ENST00000570253 CHIC1Q5VXU3 224 aa34.62■■■■□ 3.13
PKD1-240ENST00000570253 LMTK3Q96Q04 1460 aa34.61■■■■□ 3.13
PKD1-240ENST00000570253 PLPPR3Q6T4P5 718 aa34.61■■■■□ 3.13
PKD1-240ENST00000570253 MLECQ14165 292 aa34.58■■■■□ 3.13
PKD1-240ENST00000570253 FBXO41Q8TF61 875 aa34.58■■■■□ 3.13
PKD1-240ENST00000570253 TROQ12816 1431 aaPredicted RBP34.57■■■■□ 3.13
PKD1-240ENST00000570253 FER1L4A9Z1Z3 1794 aa34.55■■■■□ 3.12
PKD1-240ENST00000570253 ARHGAP5Q13017 1502 aa34.55■■■■□ 3.12
PKD1-240ENST00000570253 ATP10AO60312 1499 aa34.54■■■■□ 3.12
PKD1-240ENST00000570253 C9orf84Q5VXU9 1444 aa34.54■■■■□ 3.12
PKD1-240ENST00000570253 ZNF518AQ6AHZ1 1483 aa34.52■■■■□ 3.12
PKD1-240ENST00000570253 MYT1LQ9UL68 1186 aa34.51■■■■□ 3.12
PKD1-240ENST00000570253 SIGLEC1Q9BZZ2 1709 aa34.5■■■■□ 3.11
PKD1-240ENST00000570253 CCDC18Q5T9S5 1454 aa34.45■■■■□ 3.1
PKD1-240ENST00000570253 HSPA2P54652 639 aa34.43■■■■□ 3.1
PKD1-240ENST00000570253 ARHGEF12Q9NZN5 1544 aa34.41■■■■□ 3.1
PKD1-240ENST00000570253 LRRIQ1Q96JM4 1722 aa34.41■■■■□ 3.1
PKD1-240ENST00000570253 KDM5CP41229 1560 aa34.39■■■■□ 3.1
PKD1-240ENST00000570253 CASKIN1Q8WXD9 1431 aa34.38■■■■□ 3.09
PKD1-240ENST00000570253 AFAP1Q8N556 730 aa34.37■■■■□ 3.09
PKD1-240ENST00000570253 CDC42BPBQ9Y5S2 1711 aa34.34■■■■□ 3.09
PKD1-240ENST00000570253 PREX2Q70Z35 1606 aa34.33■■■■□ 3.09
PKD1-240ENST00000570253 PREX1Q8TCU6 1659 aa34.31■■■■□ 3.08
PKD1-240ENST00000570253 DIP2CQ9Y2E4 1556 aa34.28■■■■□ 3.08
PKD1-240ENST00000570253 ESF1Q9H501 851 aaKnown RBP34.28■■■■□ 3.08
PKD1-240ENST00000570253 REREQ9P2R6 1566 aa34.28■■■■□ 3.08
PKD1-240ENST00000570253 MLH3Q9UHC1 1453 aa34.27■■■■□ 3.08
PKD1-240ENST00000570253 FYCO1Q9BQS8 1478 aa34.27■■■■□ 3.08
PKD1-240ENST00000570253 ABCC1P33527 1531 aa34.26■■■■□ 3.08
PKD1-240ENST00000570253 ITSN2Q9NZM3 1697 aa34.23■■■■□ 3.07
PKD1-240ENST00000570253 CEBPAP49715 358 aaPredicted RBP34.22■■■■□ 3.07
PKD1-240ENST00000570253 ABCA6Q8N139 1617 aa34.22■■■■□ 3.07
PKD1-240ENST00000570253 UHRF1BP1Q6BDS2 1440 aa34.21■■■■□ 3.07
PKD1-240ENST00000570253 TRAPPC8Q9Y2L5 1435 aa34.19■■■■□ 3.06
PKD1-240ENST00000570253 CDC42BPAQ5VT25 1732 aa34.18■■■■□ 3.06
PKD1-240ENST00000570253 SETD1BQ9UPS6 1966 aaKnown RBP34.17■■■■□ 3.06
PKD1-240ENST00000570253 DMRT2Q9Y5R5 561 aa34.17■■■■□ 3.06
PKD1-240ENST00000570253 AGLP35573 1532 aa34.16■■■■□ 3.06
PKD1-240ENST00000570253 CERKQ8TCT0 537 aa34.14■■■■□ 3.06
PKD1-240ENST00000570253 ZNF777Q9ULD5 760 aaPredicted RBP34.14■■■■□ 3.06
PKD1-240ENST00000570253 KIDINS220Q9ULH0 1771 aa34.09■■■■□ 3.05
PKD1-240ENST00000570253 CNTLNQ9NXG0 1405 aa34.07■■■■□ 3.04
PKD1-240ENST00000570253 C3P01024 1663 aa34.07■■■■□ 3.04
PKD1-240ENST00000570253 SAMD9LQ8IVG5 1584 aa34.04■■■■□ 3.04
PKD1-240ENST00000570253 SPAG9O60271 1321 aaKnown RBP34.04■■■■□ 3.04
PKD1-240ENST00000570253 SYCP2Q9BX26 1530 aa34.03■■■■□ 3.04
PKD1-240ENST00000570253 PLEKHH2Q8IVE3 1493 aa34.02■■■■□ 3.04
PKD1-240ENST00000570253 GPATCH8Q9UKJ3 1502 aaKnown RBP34.02■■■■□ 3.04
PKD1-240ENST00000570253 CCNB3Q8WWL7 1395 aa34■■■■□ 3.03
PKD1-240ENST00000570253 CFDP1Q9UEE9 299 aaPredicted RBP34■■■■□ 3.03
PKD1-240ENST00000570253 MTUS2Q5JR59 1369 aa33.99■■■■□ 3.03
PKD1-240ENST00000570253 STRCQ7RTU9 1775 aa33.98■■■■□ 3.03
PKD1-240ENST00000570253 HNRNPMP52272 730 aaKnown RBP eCLIP33.96■■■■□ 3.03
PKD1-240ENST00000570253 KIAA1107Q9UPP5 1409 aa33.96■■■■□ 3.03
PKD1-240ENST00000570253 ATP7AQ04656 1500 aa33.93■■■■□ 3.02
PKD1-240ENST00000570253 MROH2AA6NES4 1674 aa33.92■■■■□ 3.02
PKD1-240ENST00000570253 SUPT6HQ7KZ85 1726 aaKnown RBP33.91■■■■□ 3.02
PKD1-240ENST00000570253 PTPRTO14522 1441 aa33.9■■■■□ 3.02
PKD1-240ENST00000570253 NPATQ14207 1427 aa33.87■■■■□ 3.01
PKD1-240ENST00000570253 INO80Q9ULG1 1556 aaPredicted RBP33.85■■■■□ 3.01
PKD1-240ENST00000570253 A2MP01023 1474 aa33.85■■■■□ 3.01
PKD1-240ENST00000570253 ZMYM3Q14202 1370 aa33.84■■■■□ 3.01
PKD1-240ENST00000570253 EHBP1L1Q8N3D4 1523 aa33.84■■■■□ 3.01
PKD1-240ENST00000570253 PLXNC1O60486 1568 aa33.8■■■■□ 3
PKD1-240ENST00000570253 NCOA1Q15788 1441 aa33.79■■■■□ 3
PKD1-240ENST00000570253 CLTCQ00610 1675 aaKnown RBP33.78■■■■□ 3
PKD1-240ENST00000570253 ADGBQ8N7X0 1667 aa33.78■■■■□ 3
PKD1-240ENST00000570253 GGT6Q6P531 493 aa33.77■■■■□ 3
PKD1-240ENST00000570253 TIAM1Q13009 1591 aa33.77■■■■□ 3
PKD1-240ENST00000570253 PPP6R1Q9UPN7 881 aa33.74■■■□□ 2.99
PKD1-240ENST00000570253 CAMSAP1Q5T5Y3 1602 aa33.74■■■□□ 2.99
PKD1-240ENST00000570253 CEP162Q5TB80 1403 aa33.72■■■□□ 2.99
PKD1-240ENST00000570253 RTEL1-TNFRSF6BF6WH68 1400 aa33.68■■■□□ 2.98
PKD1-240ENST00000570253 ZNF644Q9H582 1327 aaPredicted RBP33.67■■■□□ 2.98
PKD1-240ENST00000570253 MYO3AQ8NEV4 1616 aa33.67■■■□□ 2.98
PKD1-240ENST00000570253 ZNF142P52746 1687 aaPredicted RBP33.66■■■□□ 2.98
PKD1-240ENST00000570253 IQSEC2Q5JU85 1478 aa33.65■■■□□ 2.98
PKD1-240ENST00000570253 MBD5Q9P267 1494 aa33.64■■■□□ 2.98
PKD1-240ENST00000570253 PTPRKQ15262 1439 aa33.63■■■□□ 2.97
PKD1-240ENST00000570253 LTBP4Q8N2S1 1624 aa33.62■■■□□ 2.97
PKD1-240ENST00000570253 PKD2Q13563 968 aa33.62■■■□□ 2.97
PKD1-240ENST00000570253 CEP170BQ9Y4F5 1589 aaPredicted RBP33.62■■■□□ 2.97
PKD1-240ENST00000570253 PLA2R1Q13018 1463 aa33.61■■■□□ 2.97
PKD1-240ENST00000570253 RSPH4AQ5TD94 716 aa33.6■■■□□ 2.97
PKD1-240ENST00000570253 CCDC141Q6ZP82 1450 aa33.6■■■□□ 2.97
PKD1-240ENST00000570253 DHX29Q7Z478 1369 aaKnown RBP33.6■■■□□ 2.97
PKD1-240ENST00000570253 NCKAP5LQ9HCH0 1330 aa33.58■■■□□ 2.97
PKD1-240ENST00000570253 NCOA2Q15596 1464 aa33.56■■■□□ 2.96
PKD1-240ENST00000570253 CAMSAP2Q08AD1 1489 aa33.55■■■□□ 2.96
PKD1-240ENST00000570253 DISP3Q9P2K9 1392 aa33.54■■■□□ 2.96
PKD1-240ENST00000570253 KIF3BO15066 747 aa33.52■■■□□ 2.96
PKD1-240ENST00000570253 FAM135AQ9P2D6 1515 aa33.51■■■□□ 2.95
PKD1-240ENST00000570253 A2ML1A8K2U0 1454 aa33.5■■■□□ 2.95
PKD1-240ENST00000570253 TCOF1Q13428 1488 aaKnown RBP33.5■■■□□ 2.95
PKD1-240ENST00000570253 TSPY4P0CV99 314 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms