RNA–Protein interactions for RNA: ENST00000568346.1

KLHDC4-221, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 343 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-221ENST00000568346 ADGBQ8N7X0 1667 aa12.53□□□□□ -0.4
KLHDC4-221ENST00000568346 PTPRKQ15262 1439 aa12.53□□□□□ -0.4
KLHDC4-221ENST00000568346 UACAQ9BZF9 1416 aa12.53□□□□□ -0.4
KLHDC4-221ENST00000568346 CROCC2H7BZ55 1655 aa12.52□□□□□ -0.4
KLHDC4-221ENST00000568346 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
KLHDC4-221ENST00000568346 NAIPQ13075 1403 aa12.52□□□□□ -0.41
KLHDC4-221ENST00000568346 ITGAEP38570 1179 aa12.51□□□□□ -0.41
KLHDC4-221ENST00000568346 COL17A1Q9UMD9 1497 aaPredicted RBP12.5□□□□□ -0.41
KLHDC4-221ENST00000568346 ABCA8O94911 1581 aa12.49□□□□□ -0.41
KLHDC4-221ENST00000568346 CDC42BPAQ5VT25 1732 aa12.46□□□□□ -0.41
KLHDC4-221ENST00000568346 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
KLHDC4-221ENST00000568346 CENPBP07199 599 aaPredicted RBP12.46□□□□□ -0.41
KLHDC4-221ENST00000568346 CARMIL2Q6F5E8 1435 aa12.45□□□□□ -0.42
KLHDC4-221ENST00000568346 PPRC1Q5VV67 1664 aaKnown RBP12.45□□□□□ -0.42
KLHDC4-221ENST00000568346 SHROOM2Q13796 1616 aa12.45□□□□□ -0.42
KLHDC4-221ENST00000568346 TROQ12816 1431 aaPredicted RBP12.45□□□□□ -0.42
KLHDC4-221ENST00000568346 ROCK1Q13464 1354 aa12.43□□□□□ -0.42
KLHDC4-221ENST00000568346 KIF14Q15058 1648 aa12.43□□□□□ -0.42
KLHDC4-221ENST00000568346 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
KLHDC4-221ENST00000568346 DAPK1P53355 1430 aa12.41□□□□□ -0.42
KLHDC4-221ENST00000568346 HSPA2P54652 639 aa12.41□□□□□ -0.42
KLHDC4-221ENST00000568346 KDM5BQ9UGL1 1544 aa12.41□□□□□ -0.42
KLHDC4-221ENST00000568346 SCAF1Q9H7N4 1312 aaKnown RBP12.4□□□□□ -0.42
KLHDC4-221ENST00000568346 MIER1Q8N108 512 aa12.39□□□□□ -0.43
KLHDC4-221ENST00000568346 DENND4BO75064 1496 aaPredicted RBP12.39□□□□□ -0.43
KLHDC4-221ENST00000568346 ADGRL2O95490 1459 aa12.39□□□□□ -0.43
KLHDC4-221ENST00000568346 PLB1Q6P1J6 1458 aa12.39□□□□□ -0.43
KLHDC4-221ENST00000568346 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
KLHDC4-221ENST00000568346 CAMSAP2Q08AD1 1489 aa12.38□□□□□ -0.43
KLHDC4-221ENST00000568346 CDK11AQ9UQ88 783 aaPredicted RBP12.37□□□□□ -0.43
KLHDC4-221ENST00000568346 POLR1AO95602 1720 aaPredicted RBP12.37□□□□□ -0.43
KLHDC4-221ENST00000568346 ABCC5O15440 1437 aa12.37□□□□□ -0.43
KLHDC4-221ENST00000568346 GPATCH8Q9UKJ3 1502 aaKnown RBP12.36□□□□□ -0.43
KLHDC4-221ENST00000568346 PTPRMP28827 1452 aa12.35□□□□□ -0.43
KLHDC4-221ENST00000568346 SHANK2Q9UPX8 1470 aa12.35□□□□□ -0.43
KLHDC4-221ENST00000568346 PREX2Q70Z35 1606 aa12.35□□□□□ -0.43
KLHDC4-221ENST00000568346 ARHGEF5Q12774 1597 aa12.35□□□□□ -0.43
KLHDC4-221ENST00000568346 TONSLQ96HA7 1378 aa12.33□□□□□ -0.44
KLHDC4-221ENST00000568346 PPP1R15AO75807 674 aaPredicted RBP12.33□□□□□ -0.44
KLHDC4-221ENST00000568346 SIN3AQ96ST3 1273 aa12.33□□□□□ -0.44
KLHDC4-221ENST00000568346 PRG4Q92954 1404 aaPredicted RBP12.33□□□□□ -0.44
KLHDC4-221ENST00000568346 CDC42BPBQ9Y5S2 1711 aa12.33□□□□□ -0.44
KLHDC4-221ENST00000568346 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
KLHDC4-221ENST00000568346 ATP10BO94823 1461 aa12.31□□□□□ -0.44
KLHDC4-221ENST00000568346 KDM5DQ9BY66 1539 aa12.3□□□□□ -0.44
KLHDC4-221ENST00000568346 MYO5CQ9NQX4 1742 aa12.28□□□□□ -0.44
KLHDC4-221ENST00000568346 RPRD2Q5VT52 1461 aaKnown RBP12.27□□□□□ -0.44
KLHDC4-221ENST00000568346 MAST1Q9Y2H9 1570 aa12.27□□□□□ -0.44
KLHDC4-221ENST00000568346 TEX14Q8IWB6 1497 aa12.27□□□□□ -0.45
KLHDC4-221ENST00000568346 RRP7BPQ9NSQ0 103 aa12.26□□□□□ -0.45
KLHDC4-221ENST00000568346 NCOA1Q15788 1441 aa12.26□□□□□ -0.45
KLHDC4-221ENST00000568346 PZPP20742 1482 aa12.26□□□□□ -0.45
KLHDC4-221ENST00000568346 ABCC2Q92887 1545 aa12.26□□□□□ -0.45
KLHDC4-221ENST00000568346 MED1Q15648 1581 aaPredicted RBP12.26□□□□□ -0.45
KLHDC4-221ENST00000568346 SAMD9LQ8IVG5 1584 aa12.25□□□□□ -0.45
KLHDC4-221ENST00000568346 ADAMTSL3P82987 1691 aa12.23□□□□□ -0.45
KLHDC4-221ENST00000568346 ANKRD30BQ9BXX2 1392 aa12.23□□□□□ -0.45
KLHDC4-221ENST00000568346 PTPRGP23470 1445 aa12.22□□□□□ -0.45
KLHDC4-221ENST00000568346 CHIC2Q9UKJ5 165 aa12.22□□□□□ -0.45
KLHDC4-221ENST00000568346 PLXNC1O60486 1568 aa12.22□□□□□ -0.45
KLHDC4-221ENST00000568346 ANKRD30AQ9BXX3 1397 aa12.21□□□□□ -0.45
KLHDC4-221ENST00000568346 MPHOSPH9Q99550 1183 aa12.21□□□□□ -0.45
KLHDC4-221ENST00000568346 UNC13BO14795 1591 aa12.21□□□□□ -0.46
KLHDC4-221ENST00000568346 TTC37Q6PGP7 1564 aa12.21□□□□□ -0.46
KLHDC4-221ENST00000568346 MBD5Q9P267 1494 aa12.21□□□□□ -0.46
KLHDC4-221ENST00000568346 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
KLHDC4-221ENST00000568346 ARID3CA6NKF2 412 aa12.2□□□□□ -0.46
KLHDC4-221ENST00000568346 CFDP1Q9UEE9 299 aaPredicted RBP12.2□□□□□ -0.46
KLHDC4-221ENST00000568346 GTF3C3Q9Y5Q9 886 aa12.2□□□□□ -0.46
KLHDC4-221ENST00000568346 UHRF1BP1LA0JNW5 1464 aa12.2□□□□□ -0.46
KLHDC4-221ENST00000568346 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
KLHDC4-221ENST00000568346 ZNF644Q9H582 1327 aaPredicted RBP12.19□□□□□ -0.46
KLHDC4-221ENST00000568346 PLEKHD1A6NEE1 506 aa12.19□□□□□ -0.46
KLHDC4-221ENST00000568346 CCDC141Q6ZP82 1450 aa12.19□□□□□ -0.46
KLHDC4-221ENST00000568346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.18□□□□□ -0.46
KLHDC4-221ENST00000568346 KIAA1107Q9UPP5 1409 aa12.18□□□□□ -0.46
KLHDC4-221ENST00000568346 GLI2P10070 1586 aa12.18□□□□□ -0.46
KLHDC4-221ENST00000568346 TRIM52Q96A61 297 aa12.17□□□□□ -0.46
KLHDC4-221ENST00000568346 YTHDC1Q96MU7 727 aaKnown RBP12.17□□□□□ -0.46
KLHDC4-221ENST00000568346 ANKRD50Q9ULJ7 1429 aa12.17□□□□□ -0.46
KLHDC4-221ENST00000568346 ARHGEF12Q9NZN5 1544 aa12.16□□□□□ -0.46
KLHDC4-221ENST00000568346 PLEKHH2Q8IVE3 1493 aa12.16□□□□□ -0.46
KLHDC4-221ENST00000568346 PLPPR3Q6T4P5 718 aa12.16□□□□□ -0.46
KLHDC4-221ENST00000568346 ARAP3Q8WWN8 1544 aa12.16□□□□□ -0.46
KLHDC4-221ENST00000568346 MADDQ8WXG6 1647 aa12.15□□□□□ -0.47
KLHDC4-221ENST00000568346 CCER2I3L3R5 266 aa12.14□□□□□ -0.47
KLHDC4-221ENST00000568346 IQGAP3Q86VI3 1631 aa12.14□□□□□ -0.47
KLHDC4-221ENST00000568346 SYCP2Q9BX26 1530 aa12.13□□□□□ -0.47
KLHDC4-221ENST00000568346 ARHGAP5Q13017 1502 aa12.11□□□□□ -0.47
KLHDC4-221ENST00000568346 MAP3K4Q9Y6R4 1608 aa12.11□□□□□ -0.47
KLHDC4-221ENST00000568346 KDM5CP41229 1560 aa12.11□□□□□ -0.47
KLHDC4-221ENST00000568346 MAGI2Q86UL8 1455 aa12.11□□□□□ -0.47
KLHDC4-221ENST00000568346 DDX10Q13206 875 aaKnown RBP12.11□□□□□ -0.47
KLHDC4-221ENST00000568346 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
KLHDC4-221ENST00000568346 PHF23Q9BUL5 403 aaPredicted RBP12.11□□□□□ -0.47
KLHDC4-221ENST00000568346 ABCC1P33527 1531 aa12.11□□□□□ -0.47
KLHDC4-221ENST00000568346 ASXL2Q76L83 1435 aa12.11□□□□□ -0.47
KLHDC4-221ENST00000568346 UHRF1BP1Q6BDS2 1440 aa12.1□□□□□ -0.47
KLHDC4-221ENST00000568346 KIF15Q9NS87 1388 aa12.09□□□□□ -0.47
KLHDC4-221ENST00000568346 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms