RNA–Protein interactions for RNA: ENST00000568190.1

SIN3A-209, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-209ENST00000568190 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
SIN3A-209ENST00000568190 ARHGAP5Q13017 1502 aa13.03□□□□□ -0.32
SIN3A-209ENST00000568190 RICTORQ6R327 1708 aa13.02□□□□□ -0.32
SIN3A-209ENST00000568190 APLP2Q06481 763 aa13.01□□□□□ -0.33
SIN3A-209ENST00000568190 FRMPD1Q5SYB0 1578 aa13□□□□□ -0.33
SIN3A-209ENST00000568190 ABCC1P33527 1531 aa13□□□□□ -0.33
SIN3A-209ENST00000568190 COL17A1Q9UMD9 1497 aaPredicted RBP13□□□□□ -0.33
SIN3A-209ENST00000568190 AKNAQ7Z591 1439 aa13□□□□□ -0.33
SIN3A-209ENST00000568190 CCNB3Q8WWL7 1395 aa13□□□□□ -0.33
SIN3A-209ENST00000568190 SAMD9LQ8IVG5 1584 aa12.99□□□□□ -0.33
SIN3A-209ENST00000568190 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
SIN3A-209ENST00000568190 ZMYM4Q5VZL5 1548 aa12.98□□□□□ -0.33
SIN3A-209ENST00000568190 ADGRL1O94910 1474 aa12.98□□□□□ -0.33
SIN3A-209ENST00000568190 EFCAB2Q5VUJ9 269 aa12.98□□□□□ -0.33
SIN3A-209ENST00000568190 PLEKHH2Q8IVE3 1493 aa12.97□□□□□ -0.33
SIN3A-209ENST00000568190 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.33
SIN3A-209ENST00000568190 KDM5CP41229 1560 aa12.96□□□□□ -0.33
SIN3A-209ENST00000568190 DENND4BO75064 1496 aaPredicted RBP12.96□□□□□ -0.34
SIN3A-209ENST00000568190 POGZQ7Z3K3 1410 aa12.96□□□□□ -0.34
SIN3A-209ENST00000568190 MIA2Q96PC5 1412 aa12.96□□□□□ -0.34
SIN3A-209ENST00000568190 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.34
SIN3A-209ENST00000568190 ZNF518AQ6AHZ1 1483 aa12.94□□□□□ -0.34
SIN3A-209ENST00000568190 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
SIN3A-209ENST00000568190 CFDP1Q9UEE9 299 aaPredicted RBP12.93□□□□□ -0.34
SIN3A-209ENST00000568190 SCAPERQ9BY12 1400 aa12.93□□□□□ -0.34
SIN3A-209ENST00000568190 ARHGEF12Q9NZN5 1544 aa12.93□□□□□ -0.34
SIN3A-209ENST00000568190 CAMSAP2Q08AD1 1489 aa12.92□□□□□ -0.34
SIN3A-209ENST00000568190 MAGI2Q86UL8 1455 aa12.92□□□□□ -0.34
SIN3A-209ENST00000568190 ARHGEF5Q12774 1597 aa12.92□□□□□ -0.34
SIN3A-209ENST00000568190 ARHGEF40Q8TER5 1519 aa12.92□□□□□ -0.34
SIN3A-209ENST00000568190 HECW2Q9P2P5 1572 aa12.91□□□□□ -0.34
SIN3A-209ENST00000568190 PTPN23Q9H3S7 1636 aa12.91□□□□□ -0.34
SIN3A-209ENST00000568190 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
SIN3A-209ENST00000568190 FGD6Q6ZV73 1430 aa12.89□□□□□ -0.35
SIN3A-209ENST00000568190 TCOF1Q13428 1488 aaKnown RBP12.89□□□□□ -0.35
SIN3A-209ENST00000568190 INO80Q9ULG1 1556 aaPredicted RBP12.89□□□□□ -0.35
SIN3A-209ENST00000568190 CROCC2H7BZ55 1655 aa12.89□□□□□ -0.35
SIN3A-209ENST00000568190 MLH3Q9UHC1 1453 aa12.88□□□□□ -0.35
SIN3A-209ENST00000568190 KIDINS220Q9ULH0 1771 aa12.88□□□□□ -0.35
SIN3A-209ENST00000568190 RAPGEF3O95398 923 aa12.87□□□□□ -0.35
SIN3A-209ENST00000568190 ZFYVE16Q7Z3T8 1539 aa12.87□□□□□ -0.35
SIN3A-209ENST00000568190 TRAPPC8Q9Y2L5 1435 aa12.87□□□□□ -0.35
SIN3A-209ENST00000568190 REREQ9P2R6 1566 aa12.86□□□□□ -0.35
SIN3A-209ENST00000568190 CCDC141Q6ZP82 1450 aa12.86□□□□□ -0.35
SIN3A-209ENST00000568190 MAST1Q9Y2H9 1570 aa12.86□□□□□ -0.35
SIN3A-209ENST00000568190 DNMT1P26358 1616 aaKnown RBP12.85□□□□□ -0.35
SIN3A-209ENST00000568190 ZNF644Q9H582 1327 aaPredicted RBP12.85□□□□□ -0.35
SIN3A-209ENST00000568190 ABCA6Q8N139 1617 aa12.84□□□□□ -0.35
SIN3A-209ENST00000568190 ATP7AQ04656 1500 aa12.84□□□□□ -0.35
SIN3A-209ENST00000568190 DIP2CQ9Y2E4 1556 aa12.84□□□□□ -0.35
SIN3A-209ENST00000568190 SHANK2Q9UPX8 1470 aa12.84□□□□□ -0.35
SIN3A-209ENST00000568190 ADGBQ8N7X0 1667 aa12.83□□□□□ -0.35
SIN3A-209ENST00000568190 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
SIN3A-209ENST00000568190 ZNF777Q9ULD5 760 aaPredicted RBP12.83□□□□□ -0.36
SIN3A-209ENST00000568190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.82□□□□□ -0.369e-8■■■□□ 15.5
SIN3A-209ENST00000568190 RTEL1-TNFRSF6BF6WH68 1400 aa12.82□□□□□ -0.36
SIN3A-209ENST00000568190 PLXNC1O60486 1568 aa12.81□□□□□ -0.36
SIN3A-209ENST00000568190 YEATS2Q9ULM3 1422 aa12.81□□□□□ -0.36
SIN3A-209ENST00000568190 AFAP1Q8N556 730 aa12.81□□□□□ -0.36
SIN3A-209ENST00000568190 RRBP1Q9P2E9 1410 aaKnown RBP12.8□□□□□ -0.36
SIN3A-209ENST00000568190 SIGLEC1Q9BZZ2 1709 aa12.8□□□□□ -0.36
SIN3A-209ENST00000568190 HNRNPMP52272 730 aaKnown RBP eCLIP12.8□□□□□ -0.36
SIN3A-209ENST00000568190 ATP10AO60312 1499 aa12.79□□□□□ -0.36
SIN3A-209ENST00000568190 BCORL1Q5H9F3 1711 aa12.79□□□□□ -0.36
SIN3A-209ENST00000568190 C9orf84Q5VXU9 1444 aa12.79□□□□□ -0.36
SIN3A-209ENST00000568190 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
SIN3A-209ENST00000568190 DAPK1P53355 1430 aa12.78□□□□□ -0.36
SIN3A-209ENST00000568190 AGLP35573 1532 aa12.78□□□□□ -0.36
SIN3A-209ENST00000568190 ABCC5O15440 1437 aa12.77□□□□□ -0.37
SIN3A-209ENST00000568190 ADGRL2O95490 1459 aa12.75□□□□□ -0.37
SIN3A-209ENST00000568190 EIF2AK4Q9P2K8 1649 aaKnown RBP12.74□□□□□ -0.37
SIN3A-209ENST00000568190 ADAMTSL3P82987 1691 aa12.73□□□□□ -0.37
SIN3A-209ENST00000568190 AEBP2Q6ZN18 517 aaPredicted RBP12.73□□□□□ -0.37
SIN3A-209ENST00000568190 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
SIN3A-209ENST00000568190 A2MP01023 1474 aa12.72□□□□□ -0.37
SIN3A-209ENST00000568190 TSPY4P0CV99 314 aa12.72□□□□□ -0.37
SIN3A-209ENST00000568190 TSPY10P0CW01 314 aa12.72□□□□□ -0.37
SIN3A-209ENST00000568190 DUOX2Q9NRD8 1548 aa12.71□□□□□ -0.38
SIN3A-209ENST00000568190 RNF17Q9BXT8 1623 aaKnown RBP12.7□□□□□ -0.38
SIN3A-209ENST00000568190 FER1L4A9Z1Z3 1794 aa12.7□□□□□ -0.38
SIN3A-209ENST00000568190 NCOA1Q15788 1441 aa12.7□□□□□ -0.38
SIN3A-209ENST00000568190 ROCK1Q13464 1354 aa12.69□□□□□ -0.38
SIN3A-209ENST00000568190 FAM135AQ9P2D6 1515 aa12.69□□□□□ -0.38
SIN3A-209ENST00000568190 FAM50AQ14320 339 aaKnown RBP12.69□□□□□ -0.38
SIN3A-209ENST00000568190 DHX29Q7Z478 1369 aaKnown RBP12.69□□□□□ -0.38
SIN3A-209ENST00000568190 DEPDC5O75140 1603 aa12.68□□□□□ -0.38
SIN3A-209ENST00000568190 PTPRKQ15262 1439 aa12.68□□□□□ -0.38
SIN3A-209ENST00000568190 ERBINQ96RT1 1412 aa12.68□□□□□ -0.38
SIN3A-209ENST00000568190 ANKRD30AQ9BXX3 1397 aa12.68□□□□□ -0.38
SIN3A-209ENST00000568190 MADDQ8WXG6 1647 aa12.67□□□□□ -0.38
SIN3A-209ENST00000568190 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
SIN3A-209ENST00000568190 KIF15Q9NS87 1388 aa12.67□□□□□ -0.38
SIN3A-209ENST00000568190 MROH2AA6NES4 1674 aa12.67□□□□□ -0.38
SIN3A-209ENST00000568190 GCC2Q8IWJ2 1684 aa12.67□□□□□ -0.38
SIN3A-209ENST00000568190 ZC3H13Q5T200 1668 aaKnown RBP12.65□□□□□ -0.38
SIN3A-209ENST00000568190 PRDM15P57071 1507 aaPredicted RBP12.64□□□□□ -0.39
SIN3A-209ENST00000568190 MROH1Q8NDA8 1641 aa12.64□□□□□ -0.39
SIN3A-209ENST00000568190 RIMS1Q86UR5 1692 aaKnown RBP12.64□□□□□ -0.39
SIN3A-209ENST00000568190 ARID4BQ4LE39 1312 aaPredicted RBP12.62□□□□□ -0.39
SIN3A-209ENST00000568190 KDM4FA0A1W2PPD8 638 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms