RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 TAOK2Q9UL54 1235 aa16.95■□□□□ 0.3
UBFD1-207ENST00000567212 ZRSR1Q15695 479 aaKnown RBP16.93■□□□□ 0.3
UBFD1-207ENST00000567212 BAZ1AQ9NRL2 1556 aaPredicted RBP16.92■□□□□ 0.3
UBFD1-207ENST00000567212 FRAT2O75474 233 aaPredicted RBP16.92■□□□□ 0.3
UBFD1-207ENST00000567212 RAB3GAP2Q9H2M9 1393 aa16.91■□□□□ 0.3
UBFD1-207ENST00000567212 FAM43AQ8N2R8 423 aa16.89■□□□□ 0.29
UBFD1-207ENST00000567212 CASC1Q6TDU7 716 aa16.89■□□□□ 0.29
UBFD1-207ENST00000567212 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.29
UBFD1-207ENST00000567212 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
UBFD1-207ENST00000567212 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
UBFD1-207ENST00000567212 CALD1Q05682 793 aaKnown RBP16.88■□□□□ 0.29
UBFD1-207ENST00000567212 CLUAP1Q96AJ1 413 aa16.88■□□□□ 0.29
UBFD1-207ENST00000567212 FAM161AQ3B820 660 aa16.88■□□□□ 0.29
UBFD1-207ENST00000567212 RBM10P98175 930 aaKnown RBP16.87■□□□□ 0.29
UBFD1-207ENST00000567212 APBB1O00213 710 aa16.87■□□□□ 0.29
UBFD1-207ENST00000567212 FOXD4L5Q5VV16 416 aaPredicted RBP16.87■□□□□ 0.29
UBFD1-207ENST00000567212 FOXD4L4Q8WXT5 416 aaPredicted RBP16.87■□□□□ 0.29
UBFD1-207ENST00000567212 UBE2Q2Q8WVN8 375 aa16.86■□□□□ 0.29
UBFD1-207ENST00000567212 DHX57Q6P158 1386 aaKnown RBP16.85■□□□□ 0.29
UBFD1-207ENST00000567212 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
UBFD1-207ENST00000567212 SETD5Q9C0A6 1442 aa16.84■□□□□ 0.29
UBFD1-207ENST00000567212 DDX49Q9Y6V7 483 aaKnown RBP16.84■□□□□ 0.29
UBFD1-207ENST00000567212 GOLGA6L4A6NEF3 574 aa16.83■□□□□ 0.29
UBFD1-207ENST00000567212 PRKRIP1Q9H875 184 aaPredicted RBP16.83■□□□□ 0.28
UBFD1-207ENST00000567212 ZNF771Q7L3S4 317 aaPredicted RBP16.82■□□□□ 0.28
UBFD1-207ENST00000567212 RRP1P56182 461 aaKnown RBP16.82■□□□□ 0.28
UBFD1-207ENST00000567212 EEA1Q15075 1411 aa16.81■□□□□ 0.28
UBFD1-207ENST00000567212 DCAF11Q8TEB1 546 aa16.81■□□□□ 0.28
UBFD1-207ENST00000567212 R3HCC1Q9Y3T6 440 aaKnown RBP16.81■□□□□ 0.28
UBFD1-207ENST00000567212 ZBED9Q6R2W3 1325 aa16.81■□□□□ 0.28
UBFD1-207ENST00000567212 FOXD4L6Q3SYB3 417 aaPredicted RBP16.8■□□□□ 0.28
UBFD1-207ENST00000567212 FOXD4L3Q6VB84 417 aaPredicted RBP16.8■□□□□ 0.28
UBFD1-207ENST00000567212 CFAP53Q96M91 514 aa16.79■□□□□ 0.28
UBFD1-207ENST00000567212 ZMYND15Q9H091 742 aa16.78■□□□□ 0.28
UBFD1-207ENST00000567212 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
UBFD1-207ENST00000567212 NOL8Q76FK4 1167 aaKnown RBP16.77■□□□□ 0.28
UBFD1-207ENST00000567212 BCL11BQ9C0K0 894 aaPredicted RBP16.77■□□□□ 0.28
UBFD1-207ENST00000567212 MS4A1P11836 297 aa16.77■□□□□ 0.27
UBFD1-207ENST00000567212 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.27
UBFD1-207ENST00000567212 RWDD1Q9H446 243 aaPredicted RBP16.77■□□□□ 0.27
UBFD1-207ENST00000567212 DDX11L8A8MPP1 907 aa16.75■□□□□ 0.27
UBFD1-207ENST00000567212 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
UBFD1-207ENST00000567212 CEP164Q9UPV0 1460 aa16.75■□□□□ 0.27
UBFD1-207ENST00000567212 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
UBFD1-207ENST00000567212 NRDCO43847 1150 aa16.74■□□□□ 0.27
UBFD1-207ENST00000567212 CENPQQ7L2Z9 268 aaPredicted RBP16.74■□□□□ 0.27
UBFD1-207ENST00000567212 MAPK8IP3Q9UPT6 1336 aa16.73■□□□□ 0.27
UBFD1-207ENST00000567212 VPS8Q8N3P4 1428 aa16.73■□□□□ 0.27
UBFD1-207ENST00000567212 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
UBFD1-207ENST00000567212 GOLGA6L6A8MZA4 724 aa16.72■□□□□ 0.27
UBFD1-207ENST00000567212 PTMSP20962 102 aa16.71■□□□□ 0.27
UBFD1-207ENST00000567212 BCL2L13Q9BXK5 485 aa16.71■□□□□ 0.27
UBFD1-207ENST00000567212 GOLGA2Q08379 1002 aa16.71■□□□□ 0.27
UBFD1-207ENST00000567212 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.27
UBFD1-207ENST00000567212 KCNJ4P48050 445 aa16.71■□□□□ 0.26
UBFD1-207ENST00000567212 KTN1Q86UP2 1357 aaKnown RBP16.69■□□□□ 0.26
UBFD1-207ENST00000567212 PLEKHG5O94827 1062 aa16.69■□□□□ 0.26
UBFD1-207ENST00000567212 FGD1P98174 961 aa16.69■□□□□ 0.26
UBFD1-207ENST00000567212 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.68■□□□□ 0.26
UBFD1-207ENST00000567212 CDCA8Q53HL2 280 aa16.68■□□□□ 0.26
UBFD1-207ENST00000567212 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
UBFD1-207ENST00000567212 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
UBFD1-207ENST00000567212 RALBP1Q15311 655 aa16.67■□□□□ 0.26
UBFD1-207ENST00000567212 PMFBP1Q8TBY8 1022 aa16.67■□□□□ 0.26
UBFD1-207ENST00000567212 RRP9O43818 475 aaKnown RBP16.66■□□□□ 0.26
UBFD1-207ENST00000567212 MRE11P49959 708 aa16.66■□□□□ 0.26
UBFD1-207ENST00000567212 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
UBFD1-207ENST00000567212 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
UBFD1-207ENST00000567212 TMF1P82094 1093 aa16.65■□□□□ 0.26
UBFD1-207ENST00000567212 CHMP5Q9NZZ3 219 aa16.65■□□□□ 0.26
UBFD1-207ENST00000567212 NLRP13Q86W25 1043 aa16.65■□□□□ 0.26
UBFD1-207ENST00000567212 TRAK2O60296 914 aa16.65■□□□□ 0.26
UBFD1-207ENST00000567212 ZNF592Q92610 1267 aa16.65■□□□□ 0.26
UBFD1-207ENST00000567212 PLPPR3Q6T4P5 718 aa16.64■□□□□ 0.25
UBFD1-207ENST00000567212 SKAP1Q86WV1 359 aa16.63■□□□□ 0.25
UBFD1-207ENST00000567212 BACH2Q9BYV9 841 aa16.63■□□□□ 0.25
UBFD1-207ENST00000567212 POGKQ9P215 609 aa16.63■□□□□ 0.25
UBFD1-207ENST00000567212 MPNDQ8N594 471 aa16.63■□□□□ 0.25
UBFD1-207ENST00000567212 CFDP1Q9UEE9 299 aaPredicted RBP16.63■□□□□ 0.25
UBFD1-207ENST00000567212 MPHOSPH9Q99550 1183 aa16.62■□□□□ 0.25
UBFD1-207ENST00000567212 RNF214Q8ND24 703 aa16.62■□□□□ 0.25
UBFD1-207ENST00000567212 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
UBFD1-207ENST00000567212 SKOR2Q2VWA4 1001 aaPredicted RBP16.61■□□□□ 0.25
UBFD1-207ENST00000567212 PRDM10Q9NQV6 1147 aa16.61■□□□□ 0.25
UBFD1-207ENST00000567212 NASPP49321 788 aaPredicted RBP16.61■□□□□ 0.25
UBFD1-207ENST00000567212 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
UBFD1-207ENST00000567212 MCCP23508 829 aa16.6■□□□□ 0.25
UBFD1-207ENST00000567212 TPM2P07951 284 aa16.59■□□□□ 0.25
UBFD1-207ENST00000567212 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
UBFD1-207ENST00000567212 RRP7AQ9Y3A4 280 aaKnown RBP16.59■□□□□ 0.25
UBFD1-207ENST00000567212 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
UBFD1-207ENST00000567212 ESPNB1AK53 854 aa16.58■□□□□ 0.25
UBFD1-207ENST00000567212 AKNAQ7Z591 1439 aa16.58■□□□□ 0.25
UBFD1-207ENST00000567212 SMC4Q9NTJ3 1288 aa16.58■□□□□ 0.25
UBFD1-207ENST00000567212 PKD2Q13563 968 aa16.58■□□□□ 0.24
UBFD1-207ENST00000567212 OS9Q13438 667 aaPredicted RBP16.58■□□□□ 0.24
UBFD1-207ENST00000567212 RAPGEF2Q9Y4G8 1499 aa16.57■□□□□ 0.24
UBFD1-207ENST00000567212 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
UBFD1-207ENST00000567212 MORC1Q86VD1 984 aa16.57■□□□□ 0.24
UBFD1-207ENST00000567212 CHMP4BQ9H444 224 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms