RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 TTLL13PA6NNM8 815 aa14.96□□□□□ -0.01
CDH13-207ENST00000565636 MAMSTRQ6ZN01 415 aa14.96□□□□□ -0.01
CDH13-207ENST00000565636 TRPC6Q9Y210 931 aa14.96□□□□□ -0.01
CDH13-207ENST00000565636 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
CDH13-207ENST00000565636 IFNL1Q8IU54 200 aa14.94□□□□□ -0.02
CDH13-207ENST00000565636 POTEB2H3BUK9 544 aa14.93□□□□□ -0.02
CDH13-207ENST00000565636 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
CDH13-207ENST00000565636 PYGBP11216 843 aa14.92□□□□□ -0.02
CDH13-207ENST00000565636 SEC24BO95487 1268 aa14.91□□□□□ -0.02
CDH13-207ENST00000565636 OTUD5Q96G74 571 aa14.91□□□□□ -0.02
CDH13-207ENST00000565636 IER5LQ5T953 404 aa14.89□□□□□ -0.03
CDH13-207ENST00000565636 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
CDH13-207ENST00000565636 TMEM106CQ9BVX2 250 aa14.88□□□□□ -0.03
CDH13-207ENST00000565636 TRIM35Q9UPQ4 493 aa14.88□□□□□ -0.03
CDH13-207ENST00000565636 TOP2BQ02880 1626 aa14.87□□□□□ -0.03
CDH13-207ENST00000565636 SPOCK2Q92563 424 aa14.86□□□□□ -0.03
CDH13-207ENST00000565636 SCUBE2Q9NQ36 999 aa14.86□□□□□ -0.03
CDH13-207ENST00000565636 GRIN2AQ12879 1464 aa14.86□□□□□ -0.03
CDH13-207ENST00000565636 NUP160Q12769 1436 aa14.85□□□□□ -0.03
CDH13-207ENST00000565636 ERICH3Q5RHP9 1530 aa14.85□□□□□ -0.03
CDH13-207ENST00000565636 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.03
CDH13-207ENST00000565636 SHROOM2Q13796 1616 aa14.83□□□□□ -0.04
CDH13-207ENST00000565636 ZNF467Q7Z7K2 595 aaPredicted RBP14.82□□□□□ -0.04
CDH13-207ENST00000565636 ADAMTS12P58397 1594 aa14.81□□□□□ -0.04
CDH13-207ENST00000565636 IFNLR1Q8IU57 520 aaPredicted RBP14.79□□□□□ -0.04
CDH13-207ENST00000565636 CEP170Q5SW79 1584 aa14.78□□□□□ -0.04
CDH13-207ENST00000565636 CHRM1P11229 460 aaPredicted RBP14.78□□□□□ -0.04
CDH13-207ENST00000565636 SUPT5HO00267 1087 aaKnown RBP14.77□□□□□ -0.05
CDH13-207ENST00000565636 PCDHB8Q9UN66 801 aa14.77□□□□□ -0.05
CDH13-207ENST00000565636 CIZ1Q9ULV3 898 aaPredicted RBP14.76□□□□□ -0.05
CDH13-207ENST00000565636 PLCG2P16885 1265 aa14.74□□□□□ -0.05
CDH13-207ENST00000565636 POTEFA5A3E0 1075 aa14.73□□□□□ -0.05
CDH13-207ENST00000565636 COLQQ9Y215 455 aaPredicted RBP14.73□□□□□ -0.05
CDH13-207ENST00000565636 POTEJP0CG39 1038 aa14.72□□□□□ -0.05
CDH13-207ENST00000565636 JPH4Q96JJ6 628 aa14.71□□□□□ -0.05
CDH13-207ENST00000565636 GOLGA2Q08379 1002 aa14.7□□□□□ -0.06
CDH13-207ENST00000565636 ERCC6L2Q5T890 1561 aa14.69□□□□□ -0.06
CDH13-207ENST00000565636 KIF13AQ9H1H9 1805 aa14.67□□□□□ -0.06
CDH13-207ENST00000565636 PRG4Q92954 1404 aaPredicted RBP14.66□□□□□ -0.06
CDH13-207ENST00000565636 OCEL1Q9H607 264 aa14.64□□□□□ -0.07
CDH13-207ENST00000565636 IRX5P78411 483 aaPredicted RBP14.62□□□□□ -0.07
CDH13-207ENST00000565636 MKRN3Q13064 507 aaKnown RBP14.62□□□□□ -0.07
CDH13-207ENST00000565636 KIAA0586Q9BVV6 1533 aa14.61□□□□□ -0.07
CDH13-207ENST00000565636 PSEN1P49768 467 aa14.61□□□□□ -0.07
CDH13-207ENST00000565636 CUL7Q14999 1698 aa14.61□□□□□ -0.07
CDH13-207ENST00000565636 MAPKBP1O60336 1514 aa14.61□□□□□ -0.07
CDH13-207ENST00000565636 PDAP1Q13442 181 aaKnown RBP14.6□□□□□ -0.07
CDH13-207ENST00000565636 RUSC2Q8N2Y8 1516 aa14.6□□□□□ -0.07
CDH13-207ENST00000565636 KIF27Q86VH2 1401 aa14.58□□□□□ -0.07
CDH13-207ENST00000565636 ABCC10Q5T3U5 1492 aa14.58□□□□□ -0.08
CDH13-207ENST00000565636 IGF1RP08069 1367 aa14.58□□□□□ -0.08
CDH13-207ENST00000565636 FAM69CQ0P6D2 419 aa14.52□□□□□ -0.09
CDH13-207ENST00000565636 POTEMA6NI47 508 aa14.51□□□□□ -0.09
CDH13-207ENST00000565636 SLAIN1Q8ND83 568 aa14.51□□□□□ -0.09
CDH13-207ENST00000565636 FAM163AQ96GL9 167 aaPredicted RBP14.51□□□□□ -0.09
CDH13-207ENST00000565636 ADCY10Q96PN6 1610 aa14.5□□□□□ -0.09
CDH13-207ENST00000565636 DIP2BQ9P265 1576 aa14.49□□□□□ -0.09
CDH13-207ENST00000565636 POTEGQ6S5H5 508 aa14.49□□□□□ -0.09
CDH13-207ENST00000565636 CARMIL2Q6F5E8 1435 aa14.49□□□□□ -0.09
CDH13-207ENST00000565636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.48□□□□□ -0.09
CDH13-207ENST00000565636 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
CDH13-207ENST00000565636 L3MBTL3Q96JM7 780 aaPredicted RBP14.47□□□□□ -0.09
CDH13-207ENST00000565636 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.47□□□□□ -0.09
CDH13-207ENST00000565636 PTPRGP23470 1445 aa14.46□□□□□ -0.09
CDH13-207ENST00000565636 TNIKQ9UKE5 1360 aa14.44□□□□□ -0.1
CDH13-207ENST00000565636 UHRF1BP1LA0JNW5 1464 aa14.44□□□□□ -0.1
CDH13-207ENST00000565636 CABP2Q9NPB3 220 aa14.43□□□□□ -0.1
CDH13-207ENST00000565636 C3orf67Q6ZVT6 689 aa14.42□□□□□ -0.1
CDH13-207ENST00000565636 PLB1Q6P1J6 1458 aa14.42□□□□□ -0.1
CDH13-207ENST00000565636 GLI2P10070 1586 aa14.42□□□□□ -0.1
CDH13-207ENST00000565636 PCDH10Q9P2E7 1040 aa14.41□□□□□ -0.1
CDH13-207ENST00000565636 KDM6BO15054 1643 aa14.41□□□□□ -0.1
CDH13-207ENST00000565636 ABCC2Q92887 1545 aa14.41□□□□□ -0.1
CDH13-207ENST00000565636 IQGAP2Q13576 1575 aa14.4□□□□□ -0.1
CDH13-207ENST00000565636 PDCD7Q8N8D1 485 aaKnown RBP14.4□□□□□ -0.1
CDH13-207ENST00000565636 G3V3G9 751 aa14.39□□□□□ -0.11
CDH13-207ENST00000565636 TSPOAP1O95153 1857 aa14.39□□□□□ -0.11
CDH13-207ENST00000565636 SNPHO15079 494 aa14.38□□□□□ -0.11
CDH13-207ENST00000565636 UACAQ9BZF9 1416 aa14.35□□□□□ -0.11
CDH13-207ENST00000565636 RIOK3O14730 519 aaKnown RBP14.35□□□□□ -0.11
CDH13-207ENST00000565636 TAOK2Q9UL54 1235 aa14.35□□□□□ -0.11
CDH13-207ENST00000565636 UGGT2Q9NYU1 1516 aa14.35□□□□□ -0.11
CDH13-207ENST00000565636 RAPGEF2Q9Y4G8 1499 aa14.34□□□□□ -0.11
CDH13-207ENST00000565636 KDM5BQ9UGL1 1544 aa14.34□□□□□ -0.11
CDH13-207ENST00000565636 PLSCR2Q9NRY7 297 aa14.33□□□□□ -0.12
CDH13-207ENST00000565636 ASXL2Q76L83 1435 aa14.32□□□□□ -0.12
CDH13-207ENST00000565636 DISP1Q96F81 1524 aa14.31□□□□□ -0.12
CDH13-207ENST00000565636 VGFO15240 615 aaPredicted RBP14.3□□□□□ -0.12
CDH13-207ENST00000565636 LCE2DQ5TA82 110 aaPredicted RBP14.3□□□□□ -0.12
CDH13-207ENST00000565636 ILDR1Q86SU0 546 aaPredicted RBP14.3□□□□□ -0.12
CDH13-207ENST00000565636 PPRC1Q5VV67 1664 aaKnown RBP14.3□□□□□ -0.12
CDH13-207ENST00000565636 TEX14Q8IWB6 1497 aa14.29□□□□□ -0.12
CDH13-207ENST00000565636 KDM4FA0A1W2PPD8 638 aa14.28□□□□□ -0.12
CDH13-207ENST00000565636 MAP3K4Q9Y6R4 1608 aa14.28□□□□□ -0.12
CDH13-207ENST00000565636 GOLGA3Q08378 1498 aa14.26□□□□□ -0.13
CDH13-207ENST00000565636 FAM9AQ8IZU1 332 aaPredicted RBP14.26□□□□□ -0.13
CDH13-207ENST00000565636 EPRSP07814 1512 aaKnown RBP14.25□□□□□ -0.13
CDH13-207ENST00000565636 CTTNBP2Q8WZ74 1663 aa14.25□□□□□ -0.13
CDH13-207ENST00000565636 KIAA0556O60303 1618 aa14.24□□□□□ -0.13
CDH13-207ENST00000565636 ST18O60284 1047 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms