RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 ATP1B4Q9UN42 357 aaPredicted RBP19.22■□□□□ 0.67
NSMCE1-209ENST00000565384 SCAPERQ9BY12 1400 aa19.22■□□□□ 0.67
NSMCE1-209ENST00000565384 MYO5CQ9NQX4 1742 aa19.19■□□□□ 0.66
NSMCE1-209ENST00000565384 KIF14Q15058 1648 aa19.18■□□□□ 0.66
NSMCE1-209ENST00000565384 FBXO41Q8TF61 875 aa19.17■□□□□ 0.66
NSMCE1-209ENST00000565384 CDK11AQ9UQ88 783 aaPredicted RBP19.17■□□□□ 0.66
NSMCE1-209ENST00000565384 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
NSMCE1-209ENST00000565384 MLECQ14165 292 aa19.15■□□□□ 0.66
NSMCE1-209ENST00000565384 EFCAB2Q5VUJ9 269 aa19.15■□□□□ 0.66
NSMCE1-209ENST00000565384 CHIC1Q5VXU3 224 aa19.15■□□□□ 0.66
NSMCE1-209ENST00000565384 TROQ12816 1431 aaPredicted RBP19.15■□□□□ 0.66
NSMCE1-209ENST00000565384 FER1L4A9Z1Z3 1794 aa19.14■□□□□ 0.65
NSMCE1-209ENST00000565384 C9orf84Q5VXU9 1444 aa19.13■□□□□ 0.65
NSMCE1-209ENST00000565384 ATP10AO60312 1499 aa19.13■□□□□ 0.65
NSMCE1-209ENST00000565384 LRRIQ1Q96JM4 1722 aa19.11■□□□□ 0.65
NSMCE1-209ENST00000565384 ARHGAP5Q13017 1502 aa19.11■□□□□ 0.65
NSMCE1-209ENST00000565384 CLIP1P30622 1438 aa19.11■□□□□ 0.65
NSMCE1-209ENST00000565384 HSPA2P54652 639 aa19.11■□□□□ 0.65
NSMCE1-209ENST00000565384 ZNF518AQ6AHZ1 1483 aa19.1■□□□□ 0.65
NSMCE1-209ENST00000565384 ARHGEF12Q9NZN5 1544 aa19.1■□□□□ 0.65
NSMCE1-209ENST00000565384 KDM5CP41229 1560 aa19.08■□□□□ 0.65
NSMCE1-209ENST00000565384 AFAP1Q8N556 730 aa19.05■□□□□ 0.64
NSMCE1-209ENST00000565384 CCDC18Q5T9S5 1454 aa19.03■□□□□ 0.64
NSMCE1-209ENST00000565384 CDC42BPBQ9Y5S2 1711 aa19.03■□□□□ 0.64
NSMCE1-209ENST00000565384 DIP2CQ9Y2E4 1556 aa19.03■□□□□ 0.64
NSMCE1-209ENST00000565384 CASKIN1Q8WXD9 1431 aa19.03■□□□□ 0.64
NSMCE1-209ENST00000565384 PREX2Q70Z35 1606 aa19.02■□□□□ 0.64
NSMCE1-209ENST00000565384 MYT1LQ9UL68 1186 aa19.01■□□□□ 0.63
NSMCE1-209ENST00000565384 ABCC1P33527 1531 aa19■□□□□ 0.63
NSMCE1-209ENST00000565384 REREQ9P2R6 1566 aa19■□□□□ 0.63
NSMCE1-209ENST00000565384 PREX1Q8TCU6 1659 aa19■□□□□ 0.63
NSMCE1-209ENST00000565384 ABCA6Q8N139 1617 aa19■□□□□ 0.63
NSMCE1-209ENST00000565384 MLH3Q9UHC1 1453 aa18.99■□□□□ 0.63
NSMCE1-209ENST00000565384 CEBPAP49715 358 aaPredicted RBP18.99■□□□□ 0.63
NSMCE1-209ENST00000565384 ITSN2Q9NZM3 1697 aa18.97■□□□□ 0.63
NSMCE1-209ENST00000565384 TRAPPC8Q9Y2L5 1435 aa18.97■□□□□ 0.63
NSMCE1-209ENST00000565384 FYCO1Q9BQS8 1478 aa18.95■□□□□ 0.62
NSMCE1-209ENST00000565384 AGLP35573 1532 aa18.94■□□□□ 0.62
NSMCE1-209ENST00000565384 CDC42BPAQ5VT25 1732 aa18.94■□□□□ 0.62
NSMCE1-209ENST00000565384 UHRF1BP1Q6BDS2 1440 aa18.92■□□□□ 0.62
NSMCE1-209ENST00000565384 CERKQ8TCT0 537 aa18.92■□□□□ 0.62
NSMCE1-209ENST00000565384 KIDINS220Q9ULH0 1771 aa18.91■□□□□ 0.62
NSMCE1-209ENST00000565384 C3P01024 1663 aa18.9■□□□□ 0.62
NSMCE1-209ENST00000565384 SAMD9LQ8IVG5 1584 aa18.89■□□□□ 0.61
NSMCE1-209ENST00000565384 STRCQ7RTU9 1775 aa18.88■□□□□ 0.61
NSMCE1-209ENST00000565384 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
NSMCE1-209ENST00000565384 SYCP2Q9BX26 1530 aa18.86■□□□□ 0.61
NSMCE1-209ENST00000565384 GPATCH8Q9UKJ3 1502 aaKnown RBP18.86■□□□□ 0.61
NSMCE1-209ENST00000565384 ZNF777Q9ULD5 760 aaPredicted RBP18.86■□□□□ 0.61
NSMCE1-209ENST00000565384 SETD1BQ9UPS6 1966 aaKnown RBP18.85■□□□□ 0.61
NSMCE1-209ENST00000565384 CNTLNQ9NXG0 1405 aa18.84■□□□□ 0.61
NSMCE1-209ENST00000565384 DMRT2Q9Y5R5 561 aa18.84■□□□□ 0.61
NSMCE1-209ENST00000565384 SPAG9O60271 1321 aaKnown RBP18.81■□□□□ 0.6
NSMCE1-209ENST00000565384 HNRNPMP52272 730 aaKnown RBP eCLIP18.8■□□□□ 0.6
NSMCE1-209ENST00000565384 KIAA1107Q9UPP5 1409 aa18.8■□□□□ 0.6
NSMCE1-209ENST00000565384 ATP7AQ04656 1500 aa18.79■□□□□ 0.6
NSMCE1-209ENST00000565384 PLEKHH2Q8IVE3 1493 aa18.79■□□□□ 0.6
NSMCE1-209ENST00000565384 CFDP1Q9UEE9 299 aaPredicted RBP18.79■□□□□ 0.6
NSMCE1-209ENST00000565384 PTPRTO14522 1441 aa18.79■□□□□ 0.6
NSMCE1-209ENST00000565384 CCNB3Q8WWL7 1395 aa18.79■□□□□ 0.6
NSMCE1-209ENST00000565384 INO80Q9ULG1 1556 aaPredicted RBP18.78■□□□□ 0.6
NSMCE1-209ENST00000565384 MROH2AA6NES4 1674 aa18.78■□□□□ 0.6
NSMCE1-209ENST00000565384 SUPT6HQ7KZ85 1726 aaKnown RBP18.77■□□□□ 0.6
NSMCE1-209ENST00000565384 MTUS2Q5JR59 1369 aa18.77■□□□□ 0.6
NSMCE1-209ENST00000565384 PLXNC1O60486 1568 aa18.76■□□□□ 0.59
NSMCE1-209ENST00000565384 NPATQ14207 1427 aa18.75■□□□□ 0.59
NSMCE1-209ENST00000565384 A2MP01023 1474 aa18.75■□□□□ 0.59
NSMCE1-209ENST00000565384 NCOA1Q15788 1441 aa18.74■□□□□ 0.59
NSMCE1-209ENST00000565384 ZMYM3Q14202 1370 aa18.74■□□□□ 0.59
NSMCE1-209ENST00000565384 TIAM1Q13009 1591 aa18.72■□□□□ 0.59
NSMCE1-209ENST00000565384 EHBP1L1Q8N3D4 1523 aa18.72■□□□□ 0.59
NSMCE1-209ENST00000565384 CLTCQ00610 1675 aaKnown RBP18.72■□□□□ 0.59
NSMCE1-209ENST00000565384 CAMSAP1Q5T5Y3 1602 aa18.71■□□□□ 0.58
NSMCE1-209ENST00000565384 LTBP4Q8N2S1 1624 aa18.7■□□□□ 0.58
NSMCE1-209ENST00000565384 ADGBQ8N7X0 1667 aa18.68■□□□□ 0.58
NSMCE1-209ENST00000565384 ZNF644Q9H582 1327 aaPredicted RBP18.68■□□□□ 0.58
NSMCE1-209ENST00000565384 MYO3AQ8NEV4 1616 aa18.67■□□□□ 0.58
NSMCE1-209ENST00000565384 MBD5Q9P267 1494 aa18.67■□□□□ 0.58
NSMCE1-209ENST00000565384 GGT6Q6P531 493 aa18.67■□□□□ 0.58
NSMCE1-209ENST00000565384 CEP162Q5TB80 1403 aa18.66■□□□□ 0.58
NSMCE1-209ENST00000565384 ZNF142P52746 1687 aaPredicted RBP18.66■□□□□ 0.58
NSMCE1-209ENST00000565384 PTPRKQ15262 1439 aa18.66■□□□□ 0.58
NSMCE1-209ENST00000565384 CEP170BQ9Y4F5 1589 aaPredicted RBP18.64■□□□□ 0.58
NSMCE1-209ENST00000565384 IQSEC2Q5JU85 1478 aa18.64■□□□□ 0.57
NSMCE1-209ENST00000565384 RTEL1-TNFRSF6BF6WH68 1400 aa18.63■□□□□ 0.57
NSMCE1-209ENST00000565384 PLA2R1Q13018 1463 aa18.63■□□□□ 0.57
NSMCE1-209ENST00000565384 PPP6R1Q9UPN7 881 aa18.62■□□□□ 0.57
NSMCE1-209ENST00000565384 NCKAP5LQ9HCH0 1330 aa18.62■□□□□ 0.57
NSMCE1-209ENST00000565384 DHX29Q7Z478 1369 aaKnown RBP18.6■□□□□ 0.57
NSMCE1-209ENST00000565384 NCOA2Q15596 1464 aa18.59■□□□□ 0.57
NSMCE1-209ENST00000565384 CCDC141Q6ZP82 1450 aa18.59■□□□□ 0.57
NSMCE1-209ENST00000565384 PKD2Q13563 968 aa18.59■□□□□ 0.57
NSMCE1-209ENST00000565384 TCOF1Q13428 1488 aaKnown RBP18.58■□□□□ 0.57
NSMCE1-209ENST00000565384 DISP3Q9P2K9 1392 aa18.58■□□□□ 0.57
NSMCE1-209ENST00000565384 CAMSAP2Q08AD1 1489 aa18.58■□□□□ 0.56
NSMCE1-209ENST00000565384 ZNF335Q9H4Z2 1342 aaPredicted RBP18.57■□□□□ 0.56
NSMCE1-209ENST00000565384 A2ML1A8K2U0 1454 aa18.56■□□□□ 0.56
NSMCE1-209ENST00000565384 KIF3BO15066 747 aa18.54■□□□□ 0.56
NSMCE1-209ENST00000565384 KDM5DQ9BY66 1539 aa18.54■□□□□ 0.56
NSMCE1-209ENST00000565384 DNMT1P26358 1616 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms