RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 MAGI1Q96QZ7 1491 aaPredicted RBP10.1□□□□□ -0.79
SMG1-210ENST00000565224 DAPK1P53355 1430 aa10.1□□□□□ -0.79
SMG1-210ENST00000565224 L3MBTL2Q969R5 705 aa10.09□□□□□ -0.79
SMG1-210ENST00000565224 ARID3CA6NKF2 412 aa10.09□□□□□ -0.79
SMG1-210ENST00000565224 HNRNPUQ00839 825 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMG1-210ENST00000565224 CNTLNQ9NXG0 1405 aa10.09□□□□□ -0.79
SMG1-210ENST00000565224 SYNJ2O15056 1496 aa10.08□□□□□ -0.8
SMG1-210ENST00000565224 CHMP7Q8WUX9 453 aaPredicted RBP10.08□□□□□ -0.8
SMG1-210ENST00000565224 KIAA0586Q9BVV6 1533 aa10.08□□□□□ -0.8
SMG1-210ENST00000565224 ANKRD30BQ9BXX2 1392 aa10.08□□□□□ -0.8
SMG1-210ENST00000565224 ABCC5O15440 1437 aa10.07□□□□□ -0.8
SMG1-210ENST00000565224 KIAA0556O60303 1618 aa10.07□□□□□ -0.8
SMG1-210ENST00000565224 DNMT1P26358 1616 aaKnown RBP10.07□□□□□ -0.8
SMG1-210ENST00000565224 RPRD2Q5VT52 1461 aaKnown RBP10.07□□□□□ -0.8
SMG1-210ENST00000565224 NCOA1Q15788 1441 aa10.07□□□□□ -0.8
SMG1-210ENST00000565224 DISP1Q96F81 1524 aa10.07□□□□□ -0.8
SMG1-210ENST00000565224 FOXD1Q16676 465 aa10.07□□□□□ -0.8
SMG1-210ENST00000565224 NUP153P49790 1475 aaKnown RBP10.06□□□□□ -0.8
SMG1-210ENST00000565224 ANP32EQ9BTT0 268 aa10.06□□□□□ -0.8
SMG1-210ENST00000565224 CCDC7Q96M83 1385 aa10.06□□□□□ -0.8
SMG1-210ENST00000565224 TEX14Q8IWB6 1497 aa10.05□□□□□ -0.8
SMG1-210ENST00000565224 CDK11AQ9UQ88 783 aaPredicted RBP10.04□□□□□ -0.8
SMG1-210ENST00000565224 GRIN2AQ12879 1464 aa10.04□□□□□ -0.8
SMG1-210ENST00000565224 RAPGEF6Q8TEU7 1601 aa10.04□□□□□ -0.8
SMG1-210ENST00000565224 ZNF644Q9H582 1327 aaPredicted RBP10.03□□□□□ -0.8
SMG1-210ENST00000565224 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
SMG1-210ENST00000565224 NBPF8Q3BBV2 869 aa10.03□□□□□ -0.8
SMG1-210ENST00000565224 SLC4A1APQ9BWU0 796 aaKnown RBP10.03□□□□□ -0.8
SMG1-210ENST00000565224 RBM19Q9Y4C8 960 aaKnown RBP10.03□□□□□ -0.8
SMG1-210ENST00000565224 PRKRIP1Q9H875 184 aaPredicted RBP10.02□□□□□ -0.8
SMG1-210ENST00000565224 CEP170Q5SW79 1584 aa10.02□□□□□ -0.81
SMG1-210ENST00000565224 SPATA31E1Q6ZUB1 1445 aa10.01□□□□□ -0.81
SMG1-210ENST00000565224 TROQ12816 1431 aaPredicted RBP10.01□□□□□ -0.81
SMG1-210ENST00000565224 CLASP1Q7Z460 1538 aa10.01□□□□□ -0.81
SMG1-210ENST00000565224 NUP160Q12769 1436 aa10.01□□□□□ -0.81
SMG1-210ENST00000565224 CCDC184Q52MB2 194 aa10□□□□□ -0.81
SMG1-210ENST00000565224 ERICH6BQ5W0A0 696 aa10□□□□□ -0.81
SMG1-210ENST00000565224 PZPP20742 1482 aa10□□□□□ -0.81
SMG1-210ENST00000565224 CAMSAP2Q08AD1 1489 aa10□□□□□ -0.81
SMG1-210ENST00000565224 KIF7Q2M1P5 1343 aa10□□□□□ -0.81
SMG1-210ENST00000565224 PRG4Q92954 1404 aaPredicted RBP9.99□□□□□ -0.81
SMG1-210ENST00000565224 MRS2Q9HD23 443 aa9.99□□□□□ -0.81
SMG1-210ENST00000565224 CFDP1Q9UEE9 299 aaPredicted RBP9.99□□□□□ -0.81
SMG1-210ENST00000565224 ITSN2Q9NZM3 1697 aa9.98□□□□□ -0.81
SMG1-210ENST00000565224 ADGRL2O95490 1459 aa9.98□□□□□ -0.81
SMG1-210ENST00000565224 IRX6P78412 446 aaPredicted RBP9.97□□□□□ -0.81
SMG1-210ENST00000565224 GPATCH8Q9UKJ3 1502 aaKnown RBP9.97□□□□□ -0.81
SMG1-210ENST00000565224 MBD5Q9P267 1494 aa9.97□□□□□ -0.81
SMG1-210ENST00000565224 ZBED9Q6R2W3 1325 aa9.97□□□□□ -0.81
SMG1-210ENST00000565224 ERCC6L2Q5T890 1561 aa9.97□□□□□ -0.81
SMG1-210ENST00000565224 FAM9BQ8IZU0 186 aa9.97□□□□□ -0.81
SMG1-210ENST00000565224 KIAA1107Q9UPP5 1409 aa9.97□□□□□ -0.81
SMG1-210ENST00000565224 ADGBQ8N7X0 1667 aa9.97□□□□□ -0.81
SMG1-210ENST00000565224 POLR1AO95602 1720 aaPredicted RBP9.96□□□□□ -0.81
SMG1-210ENST00000565224 ADCY10Q96PN6 1610 aa9.96□□□□□ -0.82
SMG1-210ENST00000565224 PLB1Q6P1J6 1458 aa9.95□□□□□ -0.82
SMG1-210ENST00000565224 ANKRD30AQ9BXX3 1397 aa9.95□□□□□ -0.82
SMG1-210ENST00000565224 PPP4R2Q9NY27 417 aa9.95□□□□□ -0.82
SMG1-210ENST00000565224 RIMBP3CA6NJZ7 1639 aa9.94□□□□□ -0.82
SMG1-210ENST00000565224 RIMBP3BA6NNM3 1639 aa9.94□□□□□ -0.82
SMG1-210ENST00000565224 RIMBP3Q9UFD9 1639 aa9.94□□□□□ -0.82
SMG1-210ENST00000565224 CROCC2H7BZ55 1655 aa9.94□□□□□ -0.82
SMG1-210ENST00000565224 KIF14Q15058 1648 aa9.94□□□□□ -0.82
SMG1-210ENST00000565224 CARMIL2Q6F5E8 1435 aa9.93□□□□□ -0.82
SMG1-210ENST00000565224 ZNF777Q9ULD5 760 aaPredicted RBP9.93□□□□□ -0.82
SMG1-210ENST00000565224 USP47Q96K76 1375 aa9.93□□□□□ -0.82
SMG1-210ENST00000565224 PKD2Q13563 968 aa9.93□□□□□ -0.82
SMG1-210ENST00000565224 ANKRD50Q9ULJ7 1429 aa9.92□□□□□ -0.82
SMG1-210ENST00000565224 DHX29Q7Z478 1369 aaKnown RBP9.92□□□□□ -0.82
SMG1-210ENST00000565224 ARID4BQ4LE39 1312 aaPredicted RBP9.92□□□□□ -0.82
SMG1-210ENST00000565224 FANCIQ9NVI1 1328 aa9.91□□□□□ -0.82
SMG1-210ENST00000565224 SHANK2Q9UPX8 1470 aa9.91□□□□□ -0.82
SMG1-210ENST00000565224 JPH4Q96JJ6 628 aa9.91□□□□□ -0.82
SMG1-210ENST00000565224 UHRF1BP1Q6BDS2 1440 aa9.9□□□□□ -0.82
SMG1-210ENST00000565224 SHROOM2Q13796 1616 aa9.9□□□□□ -0.82
SMG1-210ENST00000565224 ZNF326Q5BKZ1 582 aaKnown RBP9.9□□□□□ -0.82
SMG1-210ENST00000565224 CYB5RLQ6IPT4 315 aa9.9□□□□□ -0.82
SMG1-210ENST00000565224 KDM5CP41229 1560 aa9.9□□□□□ -0.83
SMG1-210ENST00000565224 RALGAPBQ86X10 1494 aa9.89□□□□□ -0.83
SMG1-210ENST00000565224 C9orf84Q5VXU9 1444 aa9.89□□□□□ -0.83
SMG1-210ENST00000565224 BCORL1Q5H9F3 1711 aa9.89□□□□□ -0.83
SMG1-210ENST00000565224 ROCK2O75116 1388 aaKnown RBP9.89□□□□□ -0.83
SMG1-210ENST00000565224 ABCC10Q5T3U5 1492 aa9.88□□□□□ -0.83
SMG1-210ENST00000565224 ARHGEF12Q9NZN5 1544 aa9.88□□□□□ -0.83
SMG1-210ENST00000565224 PLEKHD1A6NEE1 506 aa9.88□□□□□ -0.83
SMG1-210ENST00000565224 NUP155O75694 1391 aa9.88□□□□□ -0.83
SMG1-210ENST00000565224 SMG6Q86US8 1419 aaKnown RBP9.88□□□□□ -0.83
SMG1-210ENST00000565224 KDM5DQ9BY66 1539 aa9.88□□□□□ -0.83
SMG1-210ENST00000565224 ABCA8O94911 1581 aa9.88□□□□□ -0.83
SMG1-210ENST00000565224 MSH5O43196 834 aa9.87□□□□□ -0.83
SMG1-210ENST00000565224 POLR3GLQ9BT43 218 aa9.87□□□□□ -0.83
SMG1-210ENST00000565224 CDC42BPAQ5VT25 1732 aa9.86□□□□□ -0.83
SMG1-210ENST00000565224 ATP10BO94823 1461 aa9.86□□□□□ -0.83
SMG1-210ENST00000565224 B4GALNT3Q6L9W6 998 aa9.86□□□□□ -0.83
SMG1-210ENST00000565224 TSPY4P0CV99 314 aa9.85□□□□□ -0.83
SMG1-210ENST00000565224 TSPY10P0CW01 314 aa9.85□□□□□ -0.83
SMG1-210ENST00000565224 CARD11Q9BXL7 1154 aa9.85□□□□□ -0.83
SMG1-210ENST00000565224 NUDCQ9Y266 331 aa9.85□□□□□ -0.83
SMG1-210ENST00000565224 PTPRGP23470 1445 aa9.85□□□□□ -0.83
SMG1-210ENST00000565224 KIF15Q9NS87 1388 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms