RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 ANP32CO43423 234 aa28.24■■■□□ 2.11
MSLN-205ENST00000563941 CCER2I3L3R5 266 aa28.23■■■□□ 2.11
MSLN-205ENST00000563941 TROQ12816 1431 aaPredicted RBP28.22■■■□□ 2.11
MSLN-205ENST00000563941 ZNF644Q9H582 1327 aaPredicted RBP28.22■■■□□ 2.11
MSLN-205ENST00000563941 PLB1Q6P1J6 1458 aa28.2■■■□□ 2.1
MSLN-205ENST00000563941 PRG4Q92954 1404 aaPredicted RBP28.19■■■□□ 2.1
MSLN-205ENST00000563941 ITSN2Q9NZM3 1697 aa28.18■■■□□ 2.1
MSLN-205ENST00000563941 NUP160Q12769 1436 aa28.16■■■□□ 2.1
MSLN-205ENST00000563941 ADCY10Q96PN6 1610 aa28.16■■■□□ 2.1
MSLN-205ENST00000563941 CARMIL2Q6F5E8 1435 aa28.15■■■□□ 2.1
MSLN-205ENST00000563941 FBLN2P98095 1184 aa28.15■■■□□ 2.1
MSLN-205ENST00000563941 CAMSAP2Q08AD1 1489 aa28.14■■■□□ 2.1
MSLN-205ENST00000563941 FOXD1Q16676 465 aa28.13■■■□□ 2.09
MSLN-205ENST00000563941 KIF14Q15058 1648 aa28.12■■■□□ 2.09
MSLN-205ENST00000563941 ANKRD30BQ9BXX2 1392 aa28.1■■■□□ 2.09
MSLN-205ENST00000563941 HSPA5P11021 654 aaKnown RBP28.1■■■□□ 2.09
MSLN-205ENST00000563941 ADGBQ8N7X0 1667 aa28.1■■■□□ 2.09
MSLN-205ENST00000563941 GPATCH8Q9UKJ3 1502 aaKnown RBP28.1■■■□□ 2.09
MSLN-205ENST00000563941 JPH4Q96JJ6 628 aa28.09■■■□□ 2.09
MSLN-205ENST00000563941 L3MBTL2Q969R5 705 aa28.09■■■□□ 2.09
MSLN-205ENST00000563941 CFDP1Q9UEE9 299 aaPredicted RBP28.09■■■□□ 2.09
MSLN-205ENST00000563941 RPRD2Q5VT52 1461 aaKnown RBP28.08■■■□□ 2.09
MSLN-205ENST00000563941 CROCC2H7BZ55 1655 aa28.06■■■□□ 2.08
MSLN-205ENST00000563941 EIF4G2P78344 907 aaKnown RBP eCLIP28.04■■■□□ 2.08
MSLN-205ENST00000563941 WASHC2AQ641Q2 1341 aa28.03■■■□□ 2.08
MSLN-205ENST00000563941 TEX14Q8IWB6 1497 aa28.03■■■□□ 2.08
MSLN-205ENST00000563941 SLC4A1APQ9BWU0 796 aaKnown RBP28.03■■■□□ 2.08
MSLN-205ENST00000563941 ABCA8O94911 1581 aa28.02■■■□□ 2.08
MSLN-205ENST00000563941 NCOA1Q15788 1441 aa28.01■■■□□ 2.07
MSLN-205ENST00000563941 ADGRL2O95490 1459 aa28■■■□□ 2.07
MSLN-205ENST00000563941 PZPP20742 1482 aa27.99■■■□□ 2.07
MSLN-205ENST00000563941 ZNF777Q9ULD5 760 aaPredicted RBP27.98■■■□□ 2.07
MSLN-205ENST00000563941 CDC42BPAQ5VT25 1732 aa27.96■■■□□ 2.07
MSLN-205ENST00000563941 NBPF8Q3BBV2 869 aa27.92■■■□□ 2.06
MSLN-205ENST00000563941 ATP10BO94823 1461 aa27.92■■■□□ 2.06
MSLN-205ENST00000563941 ANKRD30AQ9BXX3 1397 aa27.91■■■□□ 2.06
MSLN-205ENST00000563941 PLEKHD1A6NEE1 506 aa27.91■■■□□ 2.06
MSLN-205ENST00000563941 ABCC10Q5T3U5 1492 aa27.91■■■□□ 2.06
MSLN-205ENST00000563941 CNTLNQ9NXG0 1405 aa27.9■■■□□ 2.06
MSLN-205ENST00000563941 KIAA1107Q9UPP5 1409 aa27.87■■■□□ 2.05
MSLN-205ENST00000563941 CCDC7Q96M83 1385 aa27.86■■■□□ 2.05
MSLN-205ENST00000563941 SHANK2Q9UPX8 1470 aa27.85■■■□□ 2.05
MSLN-205ENST00000563941 FKBP8Q14318 412 aa27.84■■■□□ 2.05
MSLN-205ENST00000563941 ANKRD50Q9ULJ7 1429 aa27.84■■■□□ 2.05
MSLN-205ENST00000563941 C11orf95C9JLR9 678 aaPredicted RBP27.83■■■□□ 2.05
MSLN-205ENST00000563941 POLR1AO95602 1720 aaPredicted RBP27.82■■■□□ 2.04
MSLN-205ENST00000563941 SPATA31E1Q6ZUB1 1445 aa27.81■■■□□ 2.04
MSLN-205ENST00000563941 C9orf84Q5VXU9 1444 aa27.8■■■□□ 2.04
MSLN-205ENST00000563941 MBD5Q9P267 1494 aa27.8■■■□□ 2.04
MSLN-205ENST00000563941 PKD2Q13563 968 aa27.77■■■□□ 2.04
MSLN-205ENST00000563941 NEFLP07196 543 aa27.77■■■□□ 2.04
MSLN-205ENST00000563941 BCANQ96GW7 911 aa27.77■■■□□ 2.04
MSLN-205ENST00000563941 PTPRGP23470 1445 aa27.75■■■□□ 2.03
MSLN-205ENST00000563941 ARHGEF5Q12774 1597 aa27.73■■■□□ 2.03
MSLN-205ENST00000563941 HNRNPUQ00839 825 aaKnown RBP eCLIP27.73■■■□□ 2.03
MSLN-205ENST00000563941 CHD1O14646 1710 aa27.72■■■□□ 2.03
MSLN-205ENST00000563941 KIF7Q2M1P5 1343 aa27.72■■■□□ 2.03
MSLN-205ENST00000563941 KDM5DQ9BY66 1539 aa27.71■■■□□ 2.03
MSLN-205ENST00000563941 TSPY4P0CV99 314 aa27.7■■■□□ 2.02
MSLN-205ENST00000563941 TSPY10P0CW01 314 aa27.7■■■□□ 2.02
MSLN-205ENST00000563941 NUP155O75694 1391 aa27.7■■■□□ 2.02
MSLN-205ENST00000563941 PRKRIP1Q9H875 184 aaPredicted RBP27.68■■■□□ 2.02
MSLN-205ENST00000563941 TSHZ2Q9NRE2 1034 aa27.68■■■□□ 2.02
MSLN-205ENST00000563941 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
MSLN-205ENST00000563941 CDC42BPBQ9Y5S2 1711 aa27.67■■■□□ 2.02
MSLN-205ENST00000563941 SAMD9LQ8IVG5 1584 aa27.66■■■□□ 2.02
MSLN-205ENST00000563941 HNRNPMP52272 730 aaKnown RBP eCLIP27.66■■■□□ 2.02
MSLN-205ENST00000563941 KIF15Q9NS87 1388 aa27.66■■■□□ 2.02
MSLN-205ENST00000563941 CCDC184Q52MB2 194 aa27.64■■■□□ 2.02
MSLN-205ENST00000563941 ZNF326Q5BKZ1 582 aaKnown RBP27.62■■■□□ 2.01
MSLN-205ENST00000563941 USP47Q96K76 1375 aa27.62■■■□□ 2.01
MSLN-205ENST00000563941 CCDC141Q6ZP82 1450 aa27.62■■■□□ 2.01
MSLN-205ENST00000563941 SHROOM2Q13796 1616 aa27.61■■■□□ 2.01
MSLN-205ENST00000563941 KDM5CP41229 1560 aa27.61■■■□□ 2.01
MSLN-205ENST00000563941 BCORL1Q5H9F3 1711 aa27.6■■■□□ 2.01
MSLN-205ENST00000563941 UHRF1BP1Q6BDS2 1440 aa27.6■■■□□ 2.01
MSLN-205ENST00000563941 ARHGEF12Q9NZN5 1544 aa27.59■■■□□ 2.01
MSLN-205ENST00000563941 RALGAPBQ86X10 1494 aa27.57■■■□□ 2
MSLN-205ENST00000563941 MRS2Q9HD23 443 aa27.55■■■□□ 2
MSLN-205ENST00000563941 TTC37Q6PGP7 1564 aa27.54■■■□□ 2
MSLN-205ENST00000563941 RSPH4AQ5TD94 716 aa27.53■■■□□ 2
MSLN-205ENST00000563941 SYCP2Q9BX26 1530 aa27.51■■■□□ 2
MSLN-205ENST00000563941 FAM135AQ9P2D6 1515 aa27.5■■□□□ 1.99
MSLN-205ENST00000563941 FAM9BQ8IZU0 186 aa27.5■■□□□ 1.99
MSLN-205ENST00000563941 ARHGAP5Q13017 1502 aa27.5■■□□□ 1.99
MSLN-205ENST00000563941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.5■■□□□ 1.99
MSLN-205ENST00000563941 MAST1Q9Y2H9 1570 aa27.49■■□□□ 1.99
MSLN-205ENST00000563941 DHX29Q7Z478 1369 aaKnown RBP27.49■■□□□ 1.99
MSLN-205ENST00000563941 ARID4BQ4LE39 1312 aaPredicted RBP27.49■■□□□ 1.99
MSLN-205ENST00000563941 ABCC2Q92887 1545 aa27.48■■□□□ 1.99
MSLN-205ENST00000563941 ERCC6L2Q5T890 1561 aa27.47■■□□□ 1.99
MSLN-205ENST00000563941 MYO5CQ9NQX4 1742 aa27.46■■□□□ 1.99
MSLN-205ENST00000563941 CARD11Q9BXL7 1154 aa27.44■■□□□ 1.98
MSLN-205ENST00000563941 UNC13BO14795 1591 aa27.43■■□□□ 1.98
MSLN-205ENST00000563941 POLR3GLQ9BT43 218 aa27.43■■□□□ 1.98
MSLN-205ENST00000563941 ZBED9Q6R2W3 1325 aa27.42■■□□□ 1.98
MSLN-205ENST00000563941 KDM2AQ9Y2K7 1162 aa27.41■■□□□ 1.98
MSLN-205ENST00000563941 DCAF11Q8TEB1 546 aa27.4■■□□□ 1.98
MSLN-205ENST00000563941 PLXNC1O60486 1568 aa27.4■■□□□ 1.98
MSLN-205ENST00000563941 ROCK2O75116 1388 aaKnown RBP27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms