RNA–Protein interactions for RNA: ENST00000561773.1

TIPIN-202, Transcript of TIMELESS interacting protein, humanhuman

TSL 3

Gene TIPIN, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIPIN-202ENST00000561773 ATP1B4Q9UN42 357 aaPredicted RBP17.35■□□□□ 0.37
TIPIN-202ENST00000561773 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
TIPIN-202ENST00000561773 ARHGEF40Q8TER5 1519 aa17.35■□□□□ 0.37
TIPIN-202ENST00000561773 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
TIPIN-202ENST00000561773 CEP162Q5TB80 1403 aa17.34■□□□□ 0.37
TIPIN-202ENST00000561773 ARHGEF12Q9NZN5 1544 aa17.33■□□□□ 0.37
TIPIN-202ENST00000561773 YEATS2Q9ULM3 1422 aa17.32■□□□□ 0.36
TIPIN-202ENST00000561773 POGZQ7Z3K3 1410 aa17.3■□□□□ 0.36
TIPIN-202ENST00000561773 SCAPERQ9BY12 1400 aa17.3■□□□□ 0.36
TIPIN-202ENST00000561773 KDM5CP41229 1560 aa17.3■□□□□ 0.36
TIPIN-202ENST00000561773 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
TIPIN-202ENST00000561773 ITSN2Q9NZM3 1697 aa17.29■□□□□ 0.36
TIPIN-202ENST00000561773 CDK11AQ9UQ88 783 aaPredicted RBP17.28■□□□□ 0.36
TIPIN-202ENST00000561773 ABCC1P33527 1531 aa17.26■□□□□ 0.35
TIPIN-202ENST00000561773 SAMD9LQ8IVG5 1584 aa17.26■□□□□ 0.35
TIPIN-202ENST00000561773 ARHGAP5Q13017 1502 aa17.26■□□□□ 0.35
TIPIN-202ENST00000561773 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
TIPIN-202ENST00000561773 GPATCH8Q9UKJ3 1502 aaKnown RBP17.26■□□□□ 0.35
TIPIN-202ENST00000561773 MADDQ8WXG6 1647 aa17.25■□□□□ 0.35
TIPIN-202ENST00000561773 MAGI2Q86UL8 1455 aa17.25■□□□□ 0.35
TIPIN-202ENST00000561773 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
TIPIN-202ENST00000561773 KIDINS220Q9ULH0 1771 aa17.24■□□□□ 0.35
TIPIN-202ENST00000561773 TRAPPC8Q9Y2L5 1435 aa17.23■□□□□ 0.35
TIPIN-202ENST00000561773 ABCA6Q8N139 1617 aa17.22■□□□□ 0.35
TIPIN-202ENST00000561773 TIAM1Q13009 1591 aa17.21■□□□□ 0.35
TIPIN-202ENST00000561773 DIP2CQ9Y2E4 1556 aa17.21■□□□□ 0.35
TIPIN-202ENST00000561773 AFAP1Q8N556 730 aa17.21■□□□□ 0.35
TIPIN-202ENST00000561773 PTPRMP28827 1452 aa17.19■□□□□ 0.34
TIPIN-202ENST00000561773 RIMS1Q86UR5 1692 aaKnown RBP17.19■□□□□ 0.34
TIPIN-202ENST00000561773 HECW2Q9P2P5 1572 aa17.19■□□□□ 0.34
TIPIN-202ENST00000561773 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
TIPIN-202ENST00000561773 ATP10AO60312 1499 aa17.18■□□□□ 0.34
TIPIN-202ENST00000561773 MLH3Q9UHC1 1453 aa17.18■□□□□ 0.34
TIPIN-202ENST00000561773 REREQ9P2R6 1566 aa17.17■□□□□ 0.34
TIPIN-202ENST00000561773 EHBP1L1Q8N3D4 1523 aa17.16■□□□□ 0.34
TIPIN-202ENST00000561773 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
TIPIN-202ENST00000561773 SYCP2Q9BX26 1530 aa17.15■□□□□ 0.34
TIPIN-202ENST00000561773 VPS8Q8N3P4 1428 aa17.14■□□□□ 0.33
TIPIN-202ENST00000561773 C9orf84Q5VXU9 1444 aa17.12■□□□□ 0.33
TIPIN-202ENST00000561773 MBD5Q9P267 1494 aa17.12■□□□□ 0.33
TIPIN-202ENST00000561773 INO80Q9ULG1 1556 aaPredicted RBP17.11■□□□□ 0.33
TIPIN-202ENST00000561773 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
TIPIN-202ENST00000561773 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
TIPIN-202ENST00000561773 MTUS2Q5JR59 1369 aa17.1■□□□□ 0.33
TIPIN-202ENST00000561773 KIAA1107Q9UPP5 1409 aa17.1■□□□□ 0.33
TIPIN-202ENST00000561773 NCOA2Q15596 1464 aa17.09■□□□□ 0.33
TIPIN-202ENST00000561773 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
TIPIN-202ENST00000561773 AGLP35573 1532 aa17.08■□□□□ 0.32
TIPIN-202ENST00000561773 HNRNPMP52272 730 aaKnown RBP eCLIP17.08■□□□□ 0.32
TIPIN-202ENST00000561773 LRRC9Q6ZRR7 1453 aa17.07■□□□□ 0.32
TIPIN-202ENST00000561773 KANK4Q5T7N3 995 aaPredicted RBP17.07■□□□□ 0.32
TIPIN-202ENST00000561773 CCNB3Q8WWL7 1395 aa17.06■□□□□ 0.32
TIPIN-202ENST00000561773 PLXNC1O60486 1568 aa17.06■□□□□ 0.32
TIPIN-202ENST00000561773 ARID4BQ4LE39 1312 aaPredicted RBP17.05■□□□□ 0.32
TIPIN-202ENST00000561773 ADGBQ8N7X0 1667 aa17.05■□□□□ 0.32
TIPIN-202ENST00000561773 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
TIPIN-202ENST00000561773 ATP7AQ04656 1500 aa17.04■□□□□ 0.32
TIPIN-202ENST00000561773 C3P01024 1663 aa17.04■□□□□ 0.32
TIPIN-202ENST00000561773 CFDP1Q9UEE9 299 aaPredicted RBP17.03■□□□□ 0.32
TIPIN-202ENST00000561773 ZNF777Q9ULD5 760 aaPredicted RBP17.03■□□□□ 0.32
TIPIN-202ENST00000561773 PLEKHH2Q8IVE3 1493 aa17.01■□□□□ 0.31
TIPIN-202ENST00000561773 MLECQ14165 292 aa17■□□□□ 0.31
TIPIN-202ENST00000561773 CAMSAP2Q08AD1 1489 aa16.99■□□□□ 0.31
TIPIN-202ENST00000561773 SETD1BQ9UPS6 1966 aaKnown RBP16.99■□□□□ 0.31
TIPIN-202ENST00000561773 ARHGEF5Q12774 1597 aa16.98■□□□□ 0.31
TIPIN-202ENST00000561773 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.3
TIPIN-202ENST00000561773 MROH2AA6NES4 1674 aa16.95■□□□□ 0.3
TIPIN-202ENST00000561773 PREX1Q8TCU6 1659 aa16.95■□□□□ 0.3
TIPIN-202ENST00000561773 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
TIPIN-202ENST00000561773 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
TIPIN-202ENST00000561773 RTEL1-TNFRSF6BF6WH68 1400 aa16.94■□□□□ 0.3
TIPIN-202ENST00000561773 A2MP01023 1474 aa16.93■□□□□ 0.3
TIPIN-202ENST00000561773 CLTCQ00610 1675 aaKnown RBP16.92■□□□□ 0.3
TIPIN-202ENST00000561773 MAST1Q9Y2H9 1570 aa16.91■□□□□ 0.3
TIPIN-202ENST00000561773 CCDC141Q6ZP82 1450 aa16.91■□□□□ 0.3
TIPIN-202ENST00000561773 MYOM3Q5VTT5 1437 aa16.9■□□□□ 0.3
TIPIN-202ENST00000561773 CROCC2H7BZ55 1655 aa16.88■□□□□ 0.29
TIPIN-202ENST00000561773 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
TIPIN-202ENST00000561773 HSPA2P54652 639 aa16.86■□□□□ 0.29
TIPIN-202ENST00000561773 MYT1LQ9UL68 1186 aa16.86■□□□□ 0.29
TIPIN-202ENST00000561773 DHX29Q7Z478 1369 aaKnown RBP16.86■□□□□ 0.29
TIPIN-202ENST00000561773 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
TIPIN-202ENST00000561773 MROH1Q8NDA8 1641 aa16.85■□□□□ 0.29
TIPIN-202ENST00000561773 TCOF1Q13428 1488 aaKnown RBP16.83■□□□□ 0.28
TIPIN-202ENST00000561773 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
TIPIN-202ENST00000561773 RNF17Q9BXT8 1623 aaKnown RBP16.82■□□□□ 0.28
TIPIN-202ENST00000561773 ZMYM3Q14202 1370 aa16.82■□□□□ 0.28
TIPIN-202ENST00000561773 CNTLNQ9NXG0 1405 aa16.81■□□□□ 0.28
TIPIN-202ENST00000561773 RSPH4AQ5TD94 716 aa16.81■□□□□ 0.28
TIPIN-202ENST00000561773 DNMT1P26358 1616 aaKnown RBP16.81■□□□□ 0.28
TIPIN-202ENST00000561773 ABCC5O15440 1437 aa16.8■□□□□ 0.28
TIPIN-202ENST00000561773 PTPRKQ15262 1439 aa16.8■□□□□ 0.28
TIPIN-202ENST00000561773 ZNF142P52746 1687 aaPredicted RBP16.79■□□□□ 0.28
TIPIN-202ENST00000561773 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
TIPIN-202ENST00000561773 NPATQ14207 1427 aa16.78■□□□□ 0.28
TIPIN-202ENST00000561773 EIF2AK4Q9P2K8 1649 aaKnown RBP16.78■□□□□ 0.28
TIPIN-202ENST00000561773 MYO3AQ8NEV4 1616 aa16.77■□□□□ 0.27
TIPIN-202ENST00000561773 CFAP65Q6ZU64 1925 aaKnown RBP16.75■□□□□ 0.27
TIPIN-202ENST00000561773 GGT6Q6P531 493 aa16.75■□□□□ 0.27
TIPIN-202ENST00000561773 SHANK2Q9UPX8 1470 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms