RNA–Protein interactions for RNA: ENST00000561773.1

TIPIN-202, Transcript of TIMELESS interacting protein, humanhuman

TSL 3

Gene TIPIN, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIPIN-202ENST00000561773 NISCHQ9Y2I1 1504 aa26.71■■□□□ 1.87
TIPIN-202ENST00000561773 CCDC180Q9P1Z9 1646 aa23.87■■□□□ 1.41
TIPIN-202ENST00000561773 ABCC9O60706 1549 aa23.49■■□□□ 1.35
TIPIN-202ENST00000561773 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
TIPIN-202ENST00000561773 NACADO15069 1562 aa22.42■■□□□ 1.18
TIPIN-202ENST00000561773 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
TIPIN-202ENST00000561773 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
TIPIN-202ENST00000561773 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
TIPIN-202ENST00000561773 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
TIPIN-202ENST00000561773 DCAF1Q9Y4B6 1507 aa22.09■■□□□ 1.13
TIPIN-202ENST00000561773 BICRAQ9NZM4 1560 aa22.03■■□□□ 1.12
TIPIN-202ENST00000561773 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
TIPIN-202ENST00000561773 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
TIPIN-202ENST00000561773 SCRIBQ14160 1630 aa21.7■■□□□ 1.06
TIPIN-202ENST00000561773 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
TIPIN-202ENST00000561773 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
TIPIN-202ENST00000561773 CC2D2AQ9P2K1 1620 aa21.31■■□□□ 1
TIPIN-202ENST00000561773 CECR2Q9BXF3 1484 aa21.1■□□□□ 0.97
TIPIN-202ENST00000561773 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
TIPIN-202ENST00000561773 NCAPD3P42695 1498 aa20.73■□□□□ 0.91
TIPIN-202ENST00000561773 ATAD2BQ9ULI0 1458 aa20.7■□□□□ 0.9
TIPIN-202ENST00000561773 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
TIPIN-202ENST00000561773 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
TIPIN-202ENST00000561773 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
TIPIN-202ENST00000561773 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
TIPIN-202ENST00000561773 HMGXB3Q12766 1538 aa20.58■□□□□ 0.89
TIPIN-202ENST00000561773 BAZ1BQ9UIG0 1483 aaKnown RBP20.42■□□□□ 0.86
TIPIN-202ENST00000561773 WIZO95785 1651 aa20.42■□□□□ 0.86
TIPIN-202ENST00000561773 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
TIPIN-202ENST00000561773 NESP48681 1621 aa20.35■□□□□ 0.85
TIPIN-202ENST00000561773 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.83
TIPIN-202ENST00000561773 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
TIPIN-202ENST00000561773 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
TIPIN-202ENST00000561773 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
TIPIN-202ENST00000561773 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
TIPIN-202ENST00000561773 CUX2O14529 1486 aa20.09■□□□□ 0.81
TIPIN-202ENST00000561773 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.81
TIPIN-202ENST00000561773 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
TIPIN-202ENST00000561773 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
TIPIN-202ENST00000561773 CFTRP13569 1480 aa19.93■□□□□ 0.78
TIPIN-202ENST00000561773 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
TIPIN-202ENST00000561773 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
TIPIN-202ENST00000561773 WDR62O43379 1518 aa19.84■□□□□ 0.77
TIPIN-202ENST00000561773 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
TIPIN-202ENST00000561773 FANCD2Q9BXW9 1451 aa19.81■□□□□ 0.76
TIPIN-202ENST00000561773 DNAJC5Q9H3Z4 198 aa19.79■□□□□ 0.76
TIPIN-202ENST00000561773 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
TIPIN-202ENST00000561773 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
TIPIN-202ENST00000561773 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
TIPIN-202ENST00000561773 TOPBP1Q92547 1522 aa19.53■□□□□ 0.72
TIPIN-202ENST00000561773 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
TIPIN-202ENST00000561773 ZNF608Q9ULD9 1512 aaPredicted RBP19.44■□□□□ 0.7
TIPIN-202ENST00000561773 TARBP1Q13395 1621 aaKnown RBP19.43■□□□□ 0.7
TIPIN-202ENST00000561773 ABCC8Q09428 1581 aa19.39■□□□□ 0.69
TIPIN-202ENST00000561773 SUPT5HO00267 1087 aaKnown RBP19.38■□□□□ 0.69
TIPIN-202ENST00000561773 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
TIPIN-202ENST00000561773 CUX1P39880 1505 aa19.35■□□□□ 0.69
TIPIN-202ENST00000561773 POLA1P09884 1462 aaPredicted RBP19.34■□□□□ 0.69
TIPIN-202ENST00000561773 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
TIPIN-202ENST00000561773 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
TIPIN-202ENST00000561773 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
TIPIN-202ENST00000561773 FGD5Q6ZNL6 1462 aa19.24■□□□□ 0.67
TIPIN-202ENST00000561773 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.67
TIPIN-202ENST00000561773 CHD1O14646 1710 aa19.2■□□□□ 0.66
TIPIN-202ENST00000561773 SOGA1O94964 1423 aa19.18■□□□□ 0.66
TIPIN-202ENST00000561773 OSCARQ8IYS5 282 aa19.14■□□□□ 0.65
TIPIN-202ENST00000561773 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.65
TIPIN-202ENST00000561773 TDRD9Q8NDG6 1382 aaKnown RBP19.13■□□□□ 0.65
TIPIN-202ENST00000561773 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
TIPIN-202ENST00000561773 TOP2BQ02880 1626 aa19.09■□□□□ 0.65
TIPIN-202ENST00000561773 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
TIPIN-202ENST00000561773 PBRM1Q86U86 1689 aa19.07■□□□□ 0.64
TIPIN-202ENST00000561773 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
TIPIN-202ENST00000561773 RIMBP3CA6NJZ7 1639 aa19.05■□□□□ 0.64
TIPIN-202ENST00000561773 RIMBP3BA6NNM3 1639 aa19.05■□□□□ 0.64
TIPIN-202ENST00000561773 RIMBP3Q9UFD9 1639 aa19.05■□□□□ 0.64
TIPIN-202ENST00000561773 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.63
TIPIN-202ENST00000561773 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
TIPIN-202ENST00000561773 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
TIPIN-202ENST00000561773 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
TIPIN-202ENST00000561773 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
TIPIN-202ENST00000561773 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
TIPIN-202ENST00000561773 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
TIPIN-202ENST00000561773 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
TIPIN-202ENST00000561773 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
TIPIN-202ENST00000561773 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
TIPIN-202ENST00000561773 FBLN2P98095 1184 aa18.85■□□□□ 0.61
TIPIN-202ENST00000561773 ARAP1Q96P48 1450 aa18.83■□□□□ 0.6
TIPIN-202ENST00000561773 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
TIPIN-202ENST00000561773 CEP170Q5SW79 1584 aa18.79■□□□□ 0.6
TIPIN-202ENST00000561773 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
TIPIN-202ENST00000561773 GRIN2AQ12879 1464 aa18.77■□□□□ 0.6
TIPIN-202ENST00000561773 NUP160Q12769 1436 aa18.74■□□□□ 0.59
TIPIN-202ENST00000561773 ERCC6L2Q5T890 1561 aa18.73■□□□□ 0.59
TIPIN-202ENST00000561773 FHAD1B1AJZ9 1412 aa18.73■□□□□ 0.59
TIPIN-202ENST00000561773 SHROOM2Q13796 1616 aa18.72■□□□□ 0.59
TIPIN-202ENST00000561773 CYB5RLQ6IPT4 315 aa18.69■□□□□ 0.58
TIPIN-202ENST00000561773 IGF1RP08069 1367 aa18.66■□□□□ 0.58
TIPIN-202ENST00000561773 RUSC2Q8N2Y8 1516 aa18.59■□□□□ 0.57
TIPIN-202ENST00000561773 CUL7Q14999 1698 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms