RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 BCORL1Q5H9F3 1711 aa27.93■■■□□ 2.06
CDC42BPB-208ENST00000561271 ADAMTSL3P82987 1691 aa27.92■■■□□ 2.06
CDC42BPB-208ENST00000561271 SIGLEC1Q9BZZ2 1709 aa27.92■■■□□ 2.06
CDC42BPB-208ENST00000561271 ARHGAP5Q13017 1502 aa27.92■■■□□ 2.06
CDC42BPB-208ENST00000561271 ZFYVE16Q7Z3T8 1539 aa27.88■■■□□ 2.05
CDC42BPB-208ENST00000561271 POGZQ7Z3K3 1410 aa27.87■■■□□ 2.05
CDC42BPB-208ENST00000561271 MADDQ8WXG6 1647 aa27.85■■■□□ 2.05
CDC42BPB-208ENST00000561271 CEP162Q5TB80 1403 aa27.85■■■□□ 2.05
CDC42BPB-208ENST00000561271 ITSN2Q9NZM3 1697 aa27.85■■■□□ 2.05
CDC42BPB-208ENST00000561271 SCAPERQ9BY12 1400 aa27.84■■■□□ 2.05
CDC42BPB-208ENST00000561271 YEATS2Q9ULM3 1422 aa27.81■■■□□ 2.04
CDC42BPB-208ENST00000561271 RIMS1Q86UR5 1692 aaKnown RBP27.81■■■□□ 2.04
CDC42BPB-208ENST00000561271 ABCC1P33527 1531 aa27.79■■■□□ 2.04
CDC42BPB-208ENST00000561271 KDM5CP41229 1560 aa27.78■■■□□ 2.04
CDC42BPB-208ENST00000561271 MAGI2Q86UL8 1455 aa27.78■■■□□ 2.04
CDC42BPB-208ENST00000561271 EFCAB2Q5VUJ9 269 aa27.78■■■□□ 2.04
CDC42BPB-208ENST00000561271 HECW2Q9P2P5 1572 aa27.77■■■□□ 2.04
CDC42BPB-208ENST00000561271 FER1L4A9Z1Z3 1794 aa27.76■■■□□ 2.03
CDC42BPB-208ENST00000561271 ZNF518AQ6AHZ1 1483 aa27.74■■■□□ 2.03
CDC42BPB-208ENST00000561271 ARID4BQ4LE39 1312 aaPredicted RBP27.72■■■□□ 2.03
CDC42BPB-208ENST00000561271 SAMD9LQ8IVG5 1584 aa27.72■■■□□ 2.03
CDC42BPB-208ENST00000561271 ABCA6Q8N139 1617 aa27.7■■■□□ 2.03
CDC42BPB-208ENST00000561271 PTPRMP28827 1452 aa27.7■■■□□ 2.02
CDC42BPB-208ENST00000561271 EHBP1L1Q8N3D4 1523 aa27.69■■■□□ 2.02
CDC42BPB-208ENST00000561271 DIP2CQ9Y2E4 1556 aa27.69■■■□□ 2.02
CDC42BPB-208ENST00000561271 ARHGEF12Q9NZN5 1544 aa27.67■■■□□ 2.02
CDC42BPB-208ENST00000561271 KIDINS220Q9ULH0 1771 aa27.65■■■□□ 2.02
CDC42BPB-208ENST00000561271 TIAM1Q13009 1591 aa27.65■■■□□ 2.02
CDC42BPB-208ENST00000561271 SYCP2Q9BX26 1530 aa27.64■■■□□ 2.02
CDC42BPB-208ENST00000561271 GPATCH8Q9UKJ3 1502 aaKnown RBP27.64■■■□□ 2.02
CDC42BPB-208ENST00000561271 C9orf84Q5VXU9 1444 aa27.64■■■□□ 2.02
CDC42BPB-208ENST00000561271 MTUS2Q5JR59 1369 aa27.63■■■□□ 2.01
CDC42BPB-208ENST00000561271 ATP10AO60312 1499 aa27.63■■■□□ 2.01
CDC42BPB-208ENST00000561271 LOC105371045A0A1W2PR82 267 aa27.62■■■□□ 2.01
CDC42BPB-208ENST00000561271 TRAPPC8Q9Y2L5 1435 aa27.61■■■□□ 2.01
CDC42BPB-208ENST00000561271 SUPT6HQ7KZ85 1726 aaKnown RBP27.61■■■□□ 2.01
CDC42BPB-208ENST00000561271 AFAP1Q8N556 730 aa27.59■■■□□ 2.01
CDC42BPB-208ENST00000561271 REREQ9P2R6 1566 aa27.58■■■□□ 2.01
CDC42BPB-208ENST00000561271 MLH3Q9UHC1 1453 aa27.57■■■□□ 2
CDC42BPB-208ENST00000561271 CCNB3Q8WWL7 1395 aa27.55■■■□□ 2
CDC42BPB-208ENST00000561271 VPS8Q8N3P4 1428 aa27.54■■■□□ 2
CDC42BPB-208ENST00000561271 INO80Q9ULG1 1556 aaPredicted RBP27.52■■■□□ 2
CDC42BPB-208ENST00000561271 ZNF777Q9ULD5 760 aaPredicted RBP27.52■■■□□ 2
CDC42BPB-208ENST00000561271 MLECQ14165 292 aa27.51■■□□□ 1.99
CDC42BPB-208ENST00000561271 MYT1LQ9UL68 1186 aa27.51■■□□□ 1.99
CDC42BPB-208ENST00000561271 PLEKHH2Q8IVE3 1493 aa27.48■■□□□ 1.99
CDC42BPB-208ENST00000561271 ATP7AQ04656 1500 aa27.47■■□□□ 1.99
CDC42BPB-208ENST00000561271 NCOA2Q15596 1464 aa27.45■■□□□ 1.99
CDC42BPB-208ENST00000561271 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
CDC42BPB-208ENST00000561271 KIAA1107Q9UPP5 1409 aa27.43■■□□□ 1.98
CDC42BPB-208ENST00000561271 AGLP35573 1532 aa27.43■■□□□ 1.98
CDC42BPB-208ENST00000561271 ADGBQ8N7X0 1667 aa27.43■■□□□ 1.98
CDC42BPB-208ENST00000561271 LMTK3Q96Q04 1460 aa27.42■■□□□ 1.98
CDC42BPB-208ENST00000561271 C3P01024 1663 aa27.42■■□□□ 1.98
CDC42BPB-208ENST00000561271 PREX1Q8TCU6 1659 aa27.41■■□□□ 1.98
CDC42BPB-208ENST00000561271 PLPPR3Q6T4P5 718 aa27.41■■□□□ 1.98
CDC42BPB-208ENST00000561271 HNRNPMP52272 730 aaKnown RBP eCLIP27.4■■□□□ 1.989e-7■■■■□ 20.9
CDC42BPB-208ENST00000561271 LRRC9Q6ZRR7 1453 aa27.38■■□□□ 1.97
CDC42BPB-208ENST00000561271 PLXNC1O60486 1568 aa27.38■■□□□ 1.97
CDC42BPB-208ENST00000561271 CAMSAP2Q08AD1 1489 aa27.36■■□□□ 1.97
CDC42BPB-208ENST00000561271 MAP3K1Q13233 1512 aa27.35■■□□□ 1.97
CDC42BPB-208ENST00000561271 SPAG9O60271 1321 aaKnown RBP27.35■■□□□ 1.97
CDC42BPB-208ENST00000561271 ZNF644Q9H582 1327 aaPredicted RBP27.35■■□□□ 1.97
CDC42BPB-208ENST00000561271 MBD5Q9P267 1494 aa27.33■■□□□ 1.97
CDC42BPB-208ENST00000561271 SETD1BQ9UPS6 1966 aaKnown RBP27.33■■□□□ 1.97
CDC42BPB-208ENST00000561271 MROH2AA6NES4 1674 aa27.32■■□□□ 1.96
CDC42BPB-208ENST00000561271 CLTCQ00610 1675 aaKnown RBP27.3■■□□□ 1.96
CDC42BPB-208ENST00000561271 ARHGEF5Q12774 1597 aa27.27■■□□□ 1.96
CDC42BPB-208ENST00000561271 A2MP01023 1474 aa27.27■■□□□ 1.96
CDC42BPB-208ENST00000561271 CCDC141Q6ZP82 1450 aa27.27■■□□□ 1.96
CDC42BPB-208ENST00000561271 CEBPAP49715 358 aaPredicted RBP27.23■■□□□ 1.95
CDC42BPB-208ENST00000561271 KANK4Q5T7N3 995 aaPredicted RBP27.22■■□□□ 1.95
CDC42BPB-208ENST00000561271 CROCC2H7BZ55 1655 aa27.18■■□□□ 1.94
CDC42BPB-208ENST00000561271 RTEL1-TNFRSF6BF6WH68 1400 aa27.18■■□□□ 1.94
CDC42BPB-208ENST00000561271 CNTLNQ9NXG0 1405 aa27.18■■□□□ 1.94
CDC42BPB-208ENST00000561271 HSPA2P54652 639 aa27.18■■□□□ 1.94
CDC42BPB-208ENST00000561271 MYOM3Q5VTT5 1437 aa27.16■■□□□ 1.94
CDC42BPB-208ENST00000561271 ESF1Q9H501 851 aaKnown RBP27.15■■□□□ 1.94
CDC42BPB-208ENST00000561271 STRCQ7RTU9 1775 aa27.14■■□□□ 1.94
CDC42BPB-208ENST00000561271 MAST1Q9Y2H9 1570 aa27.14■■□□□ 1.94
CDC42BPB-208ENST00000561271 UHRF1BP1Q6BDS2 1440 aa27.12■■□□□ 1.93
CDC42BPB-208ENST00000561271 PTPN23Q9H3S7 1636 aa27.12■■□□□ 1.93
CDC42BPB-208ENST00000561271 MYO3AQ8NEV4 1616 aa27.09■■□□□ 1.93
CDC42BPB-208ENST00000561271 MIA2Q96PC5 1412 aa27.09■■□□□ 1.93
CDC42BPB-208ENST00000561271 ZNF142P52746 1687 aaPredicted RBP27.07■■□□□ 1.92
CDC42BPB-208ENST00000561271 APLP2Q06481 763 aa27.06■■□□□ 1.92
CDC42BPB-208ENST00000561271 DHX29Q7Z478 1369 aaKnown RBP27.05■■□□□ 1.92
CDC42BPB-208ENST00000561271 RNF17Q9BXT8 1623 aaKnown RBP27.04■■□□□ 1.92
CDC42BPB-208ENST00000561271 EIF2AK4Q9P2K8 1649 aaKnown RBP27.04■■□□□ 1.92
CDC42BPB-208ENST00000561271 RSPH4AQ5TD94 716 aa27.03■■□□□ 1.92
CDC42BPB-208ENST00000561271 GGT6Q6P531 493 aa27.03■■□□□ 1.92
CDC42BPB-208ENST00000561271 NPATQ14207 1427 aa27.02■■□□□ 1.92
CDC42BPB-208ENST00000561271 ZMYM3Q14202 1370 aa27.02■■□□□ 1.92
CDC42BPB-208ENST00000561271 DNMT1P26358 1616 aaKnown RBP27.01■■□□□ 1.92
CDC42BPB-208ENST00000561271 KDM5DQ9BY66 1539 aa27■■□□□ 1.91
CDC42BPB-208ENST00000561271 FAM135AQ9P2D6 1515 aa27■■□□□ 1.91
CDC42BPB-208ENST00000561271 CEP152O94986 1710 aa26.99■■□□□ 1.91
CDC42BPB-208ENST00000561271 ZC3H13Q5T200 1668 aaKnown RBP26.98■■□□□ 1.91
CDC42BPB-208ENST00000561271 TSPY4P0CV99 314 aa26.97■■□□□ 1.91
CDC42BPB-208ENST00000561271 TSPY10P0CW01 314 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms