RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 NLRP6P59044 892 aa8.74□□□□□ -1.01
USP8-217ENST00000561211 DOK7Q18PE1 504 aa8.74□□□□□ -1.01
USP8-217ENST00000561211 ZNF710Q8N1W2 664 aa8.74□□□□□ -1.01
USP8-217ENST00000561211 FBXO22Q8NEZ5 403 aa8.74□□□□□ -1.01
USP8-217ENST00000561211 MFRPQ9BY79 579 aa8.72□□□□□ -1.01
USP8-217ENST00000561211 HOXB1P14653 301 aaPredicted RBP8.71□□□□□ -1.02
USP8-217ENST00000561211 SPNS2Q8IVW8 549 aa8.71□□□□□ -1.02
USP8-217ENST00000561211 RIMBP2O15034 1052 aa8.69□□□□□ -1.02
USP8-217ENST00000561211 KRTAP3-3Q9BYR6 98 aa8.69□□□□□ -1.02
USP8-217ENST00000561211 KRTAP3-2Q9BYR7 98 aa8.69□□□□□ -1.02
USP8-217ENST00000561211 MMRN1Q13201 1228 aa8.68□□□□□ -1.02
USP8-217ENST00000561211 ERBB3P21860 1342 aa8.65□□□□□ -1.02
USP8-217ENST00000561211 ZSWIM6Q9HCJ5 1215 aa8.64□□□□□ -1.03
USP8-217ENST00000561211 VARS2Q5ST30 1063 aaKnown RBP8.62□□□□□ -1.03
USP8-217ENST00000561211 GPR153Q6NV75 609 aa8.62□□□□□ -1.03
USP8-217ENST00000561211 C2orf72A6NCS6 295 aa8.59□□□□□ -1.03
USP8-217ENST00000561211 KIF3CO14782 793 aa8.59□□□□□ -1.03
USP8-217ENST00000561211 ARSIQ5FYB1 569 aa8.59□□□□□ -1.03
USP8-217ENST00000561211 CHGAP10645 457 aaKnown RBP8.58□□□□□ -1.04
USP8-217ENST00000561211 PPP1R37O75864 691 aa8.56□□□□□ -1.04
USP8-217ENST00000561211 KHSRPQ92945 711 aaKnown RBP eCLIP8.56□□□□□ -1.044e-7■■■□□ 14.7
USP8-217ENST00000561211 HS6ST3Q8IZP7 471 aa8.54□□□□□ -1.04
USP8-217ENST00000561211 TMC2Q8TDI7 906 aa8.54□□□□□ -1.04
USP8-217ENST00000561211 ZNF687Q8N1G0 1237 aa8.53□□□□□ -1.04
USP8-217ENST00000561211 ZNF316A6NFI3 1004 aaPredicted RBP8.51□□□□□ -1.05
USP8-217ENST00000561211 SLC24A1O60721 1099 aa8.51□□□□□ -1.05
USP8-217ENST00000561211 BBXQ8WY36 941 aaPredicted RBP8.51□□□□□ -1.05
USP8-217ENST00000561211 PLCB2Q00722 1185 aa8.5□□□□□ -1.05
USP8-217ENST00000561211 NUDT7P0C024 238 aa8.49□□□□□ -1.05
USP8-217ENST00000561211 SLC34A2O95436 690 aa8.48□□□□□ -1.05
USP8-217ENST00000561211 PCDHGA4Q9Y5G9 962 aa8.48□□□□□ -1.05
USP8-217ENST00000561211 NKX1-1Q15270 411 aaPredicted RBP8.46□□□□□ -1.06
USP8-217ENST00000561211 PAXIP1Q6ZW49 1069 aaPredicted RBP8.46□□□□□ -1.06
USP8-217ENST00000561211 CFAP44Q96MT7 982 aa8.45□□□□□ -1.06
USP8-217ENST00000561211 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.45□□□□□ -1.06
USP8-217ENST00000561211 LHX6Q9UPM6 363 aa8.45□□□□□ -1.06
USP8-217ENST00000561211 RNF166Q96A37 237 aaPredicted RBP8.44□□□□□ -1.06
USP8-217ENST00000561211 MYT1LQ9UL68 1186 aa8.43□□□□□ -1.06
USP8-217ENST00000561211 LSM11P83369 360 aaKnown RBP eCLIP8.42□□□□□ -1.06
USP8-217ENST00000561211 ANKRD13DQ6ZTN6 518 aa8.42□□□□□ -1.06
USP8-217ENST00000561211 FOXK1P85037 733 aa8.41□□□□□ -1.06
USP8-217ENST00000561211 DNAJC5Q9H3Z4 198 aa8.41□□□□□ -1.06
USP8-217ENST00000561211 GPHNQ9NQX3 736 aaPredicted RBP8.41□□□□□ -1.06
USP8-217ENST00000561211 HAP1P54257 671 aaPredicted RBP8.4□□□□□ -1.06
USP8-217ENST00000561211 PLPP6Q8IY26 295 aa8.4□□□□□ -1.06
USP8-217ENST00000561211 SPRYD3Q8NCJ5 442 aa8.4□□□□□ -1.06
USP8-217ENST00000561211 PBX2P40425 430 aa8.39□□□□□ -1.07
USP8-217ENST00000561211 PTGER2P43116 358 aa8.39□□□□□ -1.07
USP8-217ENST00000561211 DSG2Q14126 1118 aa8.39□□□□□ -1.07
USP8-217ENST00000561211 POTEEQ6S8J3 1075 aa8.38□□□□□ -1.07
USP8-217ENST00000561211 PTCD2Q8WV60 388 aaKnown RBP8.38□□□□□ -1.07
USP8-217ENST00000561211 AXIN2Q9Y2T1 843 aa8.38□□□□□ -1.07
USP8-217ENST00000561211 KDM4FA0A1W2PPD8 638 aa8.37□□□□□ -1.07
USP8-217ENST00000561211 GTPBP6O43824 516 aaPredicted RBP8.36□□□□□ -1.07
USP8-217ENST00000561211 RYDENQ9NUL5 291 aaKnown RBP8.36□□□□□ -1.07
USP8-217ENST00000561211 PSDA5PKW4 1024 aaPredicted RBP8.34□□□□□ -1.07
USP8-217ENST00000561211 TSHZ2Q9NRE2 1034 aa8.34□□□□□ -1.07
USP8-217ENST00000561211 CRISPLD2Q9H0B8 497 aa8.33□□□□□ -1.08
USP8-217ENST00000561211 ARHGAP33O14559 1287 aa8.31□□□□□ -1.08
USP8-217ENST00000561211 TBC1D12O60347 775 aa8.3□□□□□ -1.08
USP8-217ENST00000561211 UPF1Q92900 1129 aaKnown RBP eCLIP8.3□□□□□ -1.08
USP8-217ENST00000561211 PPP4R3BQ5MIZ7 849 aa8.29□□□□□ -1.08
USP8-217ENST00000561211 PPP1R15BQ5SWA1 713 aa8.29□□□□□ -1.08
USP8-217ENST00000561211 OXER1Q8TDS5 423 aa8.29□□□□□ -1.08
USP8-217ENST00000561211 NCKAP5LQ9HCH0 1330 aa8.29□□□□□ -1.08
USP8-217ENST00000561211 PSEN2P49810 448 aa8.28□□□□□ -1.08
USP8-217ENST00000561211 ADGRD1Q6QNK2 874 aa8.28□□□□□ -1.08
USP8-217ENST00000561211 KDM2AQ9Y2K7 1162 aa8.28□□□□□ -1.08
USP8-217ENST00000561211 DMRTA1Q5VZB9 504 aa8.27□□□□□ -1.09
USP8-217ENST00000561211 PDE4AP27815 886 aa8.25□□□□□ -1.09
USP8-217ENST00000561211 KCNK17Q96T54 332 aa8.24□□□□□ -1.09
USP8-217ENST00000561211 TK2O00142 265 aa8.23□□□□□ -1.09
USP8-217ENST00000561211 VSIG10Q8N0Z9 540 aa8.22□□□□□ -1.09
USP8-217ENST00000561211 ZNF454Q8N9F8 522 aa8.22□□□□□ -1.09
USP8-217ENST00000561211 HRO43593 1189 aa8.21□□□□□ -1.1
USP8-217ENST00000561211 DDX27Q96GQ7 796 aaKnown RBP8.21□□□□□ -1.1
USP8-217ENST00000561211 LARP6Q9BRS8 491 aaKnown RBP8.21□□□□□ -1.1
USP8-217ENST00000561211 KCNH8Q96L42 1107 aa8.2□□□□□ -1.1
USP8-217ENST00000561211 MFSD10Q14728 455 aa8.19□□□□□ -1.1
USP8-217ENST00000561211 CADPS2Q86UW7 1296 aa8.19□□□□□ -1.1
USP8-217ENST00000561211 FOSBP53539 338 aa8.18□□□□□ -1.1
USP8-217ENST00000561211 HCSTQ9UBK5 93 aa8.18□□□□□ -1.1
USP8-217ENST00000561211 EVI5O60447 810 aa8.17□□□□□ -1.1
USP8-217ENST00000561211 BCL2L12Q9HB09 334 aa8.17□□□□□ -1.1
USP8-217ENST00000561211 JPH4Q96JJ6 628 aa8.16□□□□□ -1.1
USP8-217ENST00000561211 ANO8Q9HCE9 1232 aaPredicted RBP8.16□□□□□ -1.1
USP8-217ENST00000561211 VPS9D1Q9Y2B5 631 aa8.16□□□□□ -1.1
USP8-217ENST00000561211 EMILIN3Q9NT22 766 aa8.15□□□□□ -1.1
USP8-217ENST00000561211 MAP3K9P80192 1104 aa8.14□□□□□ -1.11
USP8-217ENST00000561211 KCTD12Q96CX2 325 aaKnown RBP8.14□□□□□ -1.11
USP8-217ENST00000561211 STAC3Q96MF2 364 aa8.14□□□□□ -1.11
USP8-217ENST00000561211 PTPREP23469 700 aa8.13□□□□□ -1.11
USP8-217ENST00000561211 PLA2G2EQ9NZK7 142 aa8.13□□□□□ -1.11
USP8-217ENST00000561211 ZDHHC16Q969W1 377 aa8.12□□□□□ -1.11
USP8-217ENST00000561211 ADAM33Q9BZ11 813 aa8.12□□□□□ -1.11
USP8-217ENST00000561211 ZBED2Q9BTP6 218 aa8.11□□□□□ -1.11
USP8-217ENST00000561211 SLC4A5Q9BY07 1137 aa8.11□□□□□ -1.11
USP8-217ENST00000561211 BHMG1C9JSJ3 638 aaPredicted RBP8.08□□□□□ -1.12
USP8-217ENST00000561211 PCDHGA10Q9Y5H3 936 aa8.08□□□□□ -1.12
USP8-217ENST00000561211 CAMK2BQ13554 666 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms