RNA–Protein interactions for RNA: ENST00000560503.2

AC009654.1-201, humanhuman

TSL 3 BASIC

Gene AC009654.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009654.1-201ENST00000560503 PREX2Q70Z35 1606 aa19.1■□□□□ 0.65
AC009654.1-201ENST00000560503 TIAM1Q13009 1591 aa19.1■□□□□ 0.65
AC009654.1-201ENST00000560503 PLCH2O75038 1416 aa19.09■□□□□ 0.65
AC009654.1-201ENST00000560503 ARHGAP5Q13017 1502 aa19.08■□□□□ 0.64
AC009654.1-201ENST00000560503 CDC42BPAQ5VT25 1732 aa19.06■□□□□ 0.64
AC009654.1-201ENST00000560503 SUPT6HQ7KZ85 1726 aaKnown RBP19.06■□□□□ 0.64
AC009654.1-201ENST00000560503 COL17A1Q9UMD9 1497 aaPredicted RBP19.06■□□□□ 0.64
AC009654.1-201ENST00000560503 AKNAQ7Z591 1439 aa19.06■□□□□ 0.64
AC009654.1-201ENST00000560503 CDC42BPBQ9Y5S2 1711 aa19.05■□□□□ 0.64
AC009654.1-201ENST00000560503 MAP3K1Q13233 1512 aa19.05■□□□□ 0.64
AC009654.1-201ENST00000560503 ITSN2Q9NZM3 1697 aa19.05■□□□□ 0.64
AC009654.1-201ENST00000560503 APLP2Q06481 763 aa19.04■□□□□ 0.64
AC009654.1-201ENST00000560503 EFCAB2Q5VUJ9 269 aa19.04■□□□□ 0.64
AC009654.1-201ENST00000560503 DENND4BO75064 1496 aaPredicted RBP19.03■□□□□ 0.64
AC009654.1-201ENST00000560503 ADGRL1O94910 1474 aa19.03■□□□□ 0.64
AC009654.1-201ENST00000560503 RICTORQ6R327 1708 aa19.02■□□□□ 0.63
AC009654.1-201ENST00000560503 CCNB3Q8WWL7 1395 aa19■□□□□ 0.63
AC009654.1-201ENST00000560503 FRMPD1Q5SYB0 1578 aa18.98■□□□□ 0.63
AC009654.1-201ENST00000560503 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
AC009654.1-201ENST00000560503 SCAPERQ9BY12 1400 aa18.96■□□□□ 0.63
AC009654.1-201ENST00000560503 ZMYM4Q5VZL5 1548 aa18.95■□□□□ 0.62
AC009654.1-201ENST00000560503 GPATCH8Q9UKJ3 1502 aaKnown RBP18.95■□□□□ 0.62
AC009654.1-201ENST00000560503 POGZQ7Z3K3 1410 aa18.95■□□□□ 0.62
AC009654.1-201ENST00000560503 ABCC1P33527 1531 aa18.95■□□□□ 0.62
AC009654.1-201ENST00000560503 NCOA2Q15596 1464 aa18.94■□□□□ 0.62
AC009654.1-201ENST00000560503 ZNF518AQ6AHZ1 1483 aa18.94■□□□□ 0.62
AC009654.1-201ENST00000560503 PLEKHH2Q8IVE3 1493 aa18.94■□□□□ 0.62
AC009654.1-201ENST00000560503 RAPGEF3O95398 923 aa18.93■□□□□ 0.62
AC009654.1-201ENST00000560503 ARHGEF40Q8TER5 1519 aa18.93■□□□□ 0.62
AC009654.1-201ENST00000560503 MAGI2Q86UL8 1455 aa18.91■□□□□ 0.62
AC009654.1-201ENST00000560503 CFDP1Q9UEE9 299 aaPredicted RBP18.91■□□□□ 0.62
AC009654.1-201ENST00000560503 SAMD9LQ8IVG5 1584 aa18.9■□□□□ 0.62
AC009654.1-201ENST00000560503 ZFYVE16Q7Z3T8 1539 aa18.9■□□□□ 0.62
AC009654.1-201ENST00000560503 KDM5CP41229 1560 aa18.89■□□□□ 0.61
AC009654.1-201ENST00000560503 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
AC009654.1-201ENST00000560503 HECW2Q9P2P5 1572 aa18.88■□□□□ 0.61
AC009654.1-201ENST00000560503 SYCP2Q9BX26 1530 aa18.87■□□□□ 0.61
AC009654.1-201ENST00000560503 KIAA1107Q9UPP5 1409 aa18.85■□□□□ 0.61
AC009654.1-201ENST00000560503 KANK4Q5T7N3 995 aaPredicted RBP18.82■□□□□ 0.6
AC009654.1-201ENST00000560503 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
AC009654.1-201ENST00000560503 ARHGEF12Q9NZN5 1544 aa18.81■□□□□ 0.6
AC009654.1-201ENST00000560503 MYOM3Q5VTT5 1437 aa18.81■□□□□ 0.6
AC009654.1-201ENST00000560503 SCAF1Q9H7N4 1312 aaKnown RBP18.8■□□□□ 0.6
AC009654.1-201ENST00000560503 CAMSAP2Q08AD1 1489 aa18.8■□□□□ 0.6
AC009654.1-201ENST00000560503 MLH3Q9UHC1 1453 aa18.8■□□□□ 0.6
AC009654.1-201ENST00000560503 TRAPPC8Q9Y2L5 1435 aa18.8■□□□□ 0.6
AC009654.1-201ENST00000560503 MIA2Q96PC5 1412 aa18.79■□□□□ 0.6
AC009654.1-201ENST00000560503 C9orf84Q5VXU9 1444 aa18.78■□□□□ 0.6
AC009654.1-201ENST00000560503 YEATS2Q9ULM3 1422 aa18.78■□□□□ 0.6
AC009654.1-201ENST00000560503 MAPK8IP2Q13387 824 aaPredicted RBP18.78■□□□□ 0.6
AC009654.1-201ENST00000560503 AFAP1Q8N556 730 aa18.78■□□□□ 0.6
AC009654.1-201ENST00000560503 ATP10AO60312 1499 aa18.77■□□□□ 0.59
AC009654.1-201ENST00000560503 ARID4BQ4LE39 1312 aaPredicted RBP18.76■□□□□ 0.59
AC009654.1-201ENST00000560503 KIDINS220Q9ULH0 1771 aa18.76■□□□□ 0.59
AC009654.1-201ENST00000560503 DIP2CQ9Y2E4 1556 aa18.76■□□□□ 0.59
AC009654.1-201ENST00000560503 ATP7AQ04656 1500 aa18.75■□□□□ 0.59
AC009654.1-201ENST00000560503 ABCA6Q8N139 1617 aa18.75■□□□□ 0.59
AC009654.1-201ENST00000560503 CCDC141Q6ZP82 1450 aa18.75■□□□□ 0.59
AC009654.1-201ENST00000560503 ARHGEF5Q12774 1597 aa18.75■□□□□ 0.59
AC009654.1-201ENST00000560503 REREQ9P2R6 1566 aa18.75■□□□□ 0.59
AC009654.1-201ENST00000560503 INO80Q9ULG1 1556 aaPredicted RBP18.75■□□□□ 0.59
AC009654.1-201ENST00000560503 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
AC009654.1-201ENST00000560503 BCORL1Q5H9F3 1711 aa18.74■□□□□ 0.59
AC009654.1-201ENST00000560503 HNRNPMP52272 730 aaKnown RBP eCLIP18.74■□□□□ 0.59
AC009654.1-201ENST00000560503 RSPH4AQ5TD94 716 aa18.74■□□□□ 0.59
AC009654.1-201ENST00000560503 PTPN23Q9H3S7 1636 aa18.72■□□□□ 0.59
AC009654.1-201ENST00000560503 MBD5Q9P267 1494 aa18.71■□□□□ 0.59
AC009654.1-201ENST00000560503 ADGBQ8N7X0 1667 aa18.71■□□□□ 0.59
AC009654.1-201ENST00000560503 ZNF644Q9H582 1327 aaPredicted RBP18.71■□□□□ 0.59
AC009654.1-201ENST00000560503 ADAMTSL3P82987 1691 aa18.69■□□□□ 0.58
AC009654.1-201ENST00000560503 FGD6Q6ZV73 1430 aa18.69■□□□□ 0.58
AC009654.1-201ENST00000560503 KDM4FA0A1W2PPD8 638 aa18.68■□□□□ 0.58
AC009654.1-201ENST00000560503 RTEL1-TNFRSF6BF6WH68 1400 aa18.67■□□□□ 0.58
AC009654.1-201ENST00000560503 FER1L4A9Z1Z3 1794 aa18.67■□□□□ 0.58
AC009654.1-201ENST00000560503 SIGLEC1Q9BZZ2 1709 aa18.66■□□□□ 0.58
AC009654.1-201ENST00000560503 AGLP35573 1532 aa18.66■□□□□ 0.58
AC009654.1-201ENST00000560503 TSPY4P0CV99 314 aa18.66■□□□□ 0.58
AC009654.1-201ENST00000560503 TSPY10P0CW01 314 aa18.66■□□□□ 0.58
AC009654.1-201ENST00000560503 CROCC2H7BZ55 1655 aa18.66■□□□□ 0.58
AC009654.1-201ENST00000560503 MADDQ8WXG6 1647 aa18.65■□□□□ 0.58
AC009654.1-201ENST00000560503 DMRT2Q9Y5R5 561 aa18.65■□□□□ 0.58
AC009654.1-201ENST00000560503 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
AC009654.1-201ENST00000560503 MAST1Q9Y2H9 1570 aa18.64■□□□□ 0.58
AC009654.1-201ENST00000560503 A2MP01023 1474 aa18.63■□□□□ 0.57
AC009654.1-201ENST00000560503 DNMT1P26358 1616 aaKnown RBP18.63■□□□□ 0.57
AC009654.1-201ENST00000560503 RIMS1Q86UR5 1692 aaKnown RBP18.63■□□□□ 0.57
AC009654.1-201ENST00000560503 PLXNC1O60486 1568 aa18.62■□□□□ 0.57
AC009654.1-201ENST00000560503 SHANK2Q9UPX8 1470 aa18.61■□□□□ 0.57
AC009654.1-201ENST00000560503 MLECQ14165 292 aa18.59■□□□□ 0.57
AC009654.1-201ENST00000560503 DAPK1P53355 1430 aa18.57■□□□□ 0.56
AC009654.1-201ENST00000560503 ESF1Q9H501 851 aaKnown RBP18.56■□□□□ 0.56
AC009654.1-201ENST00000560503 PTPRMP28827 1452 aa18.56■□□□□ 0.56
AC009654.1-201ENST00000560503 FAM50AQ14320 339 aaKnown RBP18.54■□□□□ 0.56
AC009654.1-201ENST00000560503 DHX29Q7Z478 1369 aaKnown RBP18.54■□□□□ 0.56
AC009654.1-201ENST00000560503 ABCC5O15440 1437 aa18.53■□□□□ 0.56
AC009654.1-201ENST00000560503 EIF2AK4Q9P2K8 1649 aaKnown RBP18.52■□□□□ 0.56
AC009654.1-201ENST00000560503 CNTLNQ9NXG0 1405 aa18.52■□□□□ 0.56
AC009654.1-201ENST00000560503 DUOX2Q9NRD8 1548 aa18.51■□□□□ 0.55
AC009654.1-201ENST00000560503 MROH2AA6NES4 1674 aa18.5■□□□□ 0.55
AC009654.1-201ENST00000560503 FAM135AQ9P2D6 1515 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms