RNA–Protein interactions for RNA: ENST00000560190.5

TCF12-215, Transcript of transcription factor 12, humanhuman

TSL 1 (best)

Gene TCF12, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-215ENST00000560190 LMTK3Q96Q04 1460 aa31.4■■■□□ 2.62
TCF12-215ENST00000560190 KIF14Q15058 1648 aa31.39■■■□□ 2.62
TCF12-215ENST00000560190 MAGI2Q86UL8 1455 aa31.36■■■□□ 2.61
TCF12-215ENST00000560190 LRRIQ1Q96JM4 1722 aa31.35■■■□□ 2.61
TCF12-215ENST00000560190 SCAPERQ9BY12 1400 aa31.34■■■□□ 2.61
TCF12-215ENST00000560190 ATP1B4Q9UN42 357 aaPredicted RBP31.33■■■□□ 2.61
TCF12-215ENST00000560190 FER1L4A9Z1Z3 1794 aa31.3■■■□□ 2.6
TCF12-215ENST00000560190 TROQ12816 1431 aaPredicted RBP31.27■■■□□ 2.6
TCF12-215ENST00000560190 ARHGAP5Q13017 1502 aa31.22■■■□□ 2.59
TCF12-215ENST00000560190 CDK11AQ9UQ88 783 aaPredicted RBP31.21■■■□□ 2.59
TCF12-215ENST00000560190 C9orf84Q5VXU9 1444 aa31.21■■■□□ 2.59
TCF12-215ENST00000560190 EFCAB2Q5VUJ9 269 aa31.2■■■□□ 2.59
TCF12-215ENST00000560190 PLPPR3Q6T4P5 718 aa31.2■■■□□ 2.59
TCF12-215ENST00000560190 KDM5CP41229 1560 aa31.2■■■□□ 2.58
TCF12-215ENST00000560190 ATP10AO60312 1499 aa31.2■■■□□ 2.58
TCF12-215ENST00000560190 ARHGEF12Q9NZN5 1544 aa31.19■■■□□ 2.58
TCF12-215ENST00000560190 CLIP1P30622 1438 aa31.19■■■□□ 2.58
TCF12-215ENST00000560190 MLECQ14165 292 aa31.19■■■□□ 2.58
TCF12-215ENST00000560190 ZNF518AQ6AHZ1 1483 aa31.19■■■□□ 2.58
TCF12-215ENST00000560190 CDC42BPBQ9Y5S2 1711 aa31.16■■■□□ 2.58
TCF12-215ENST00000560190 HSPA2P54652 639 aa31.14■■■□□ 2.58
TCF12-215ENST00000560190 FBXO41Q8TF61 875 aa31.14■■■□□ 2.58
TCF12-215ENST00000560190 PREX2Q70Z35 1606 aa31.13■■■□□ 2.57
TCF12-215ENST00000560190 DIP2CQ9Y2E4 1556 aa31.11■■■□□ 2.57
TCF12-215ENST00000560190 CASKIN1Q8WXD9 1431 aa31.1■■■□□ 2.57
TCF12-215ENST00000560190 CCDC18Q5T9S5 1454 aa31.09■■■□□ 2.57
TCF12-215ENST00000560190 ABCA6Q8N139 1617 aa31.08■■■□□ 2.57
TCF12-215ENST00000560190 ABCC1P33527 1531 aa31.08■■■□□ 2.57
TCF12-215ENST00000560190 AFAP1Q8N556 730 aa31.06■■■□□ 2.56
TCF12-215ENST00000560190 PREX1Q8TCU6 1659 aa31.05■■■□□ 2.56
TCF12-215ENST00000560190 ITSN2Q9NZM3 1697 aa31.05■■■□□ 2.56
TCF12-215ENST00000560190 REREQ9P2R6 1566 aa31.04■■■□□ 2.56
TCF12-215ENST00000560190 CDC42BPAQ5VT25 1732 aa31.02■■■□□ 2.56
TCF12-215ENST00000560190 FYCO1Q9BQS8 1478 aa31■■■□□ 2.55
TCF12-215ENST00000560190 MLH3Q9UHC1 1453 aa31■■■□□ 2.55
TCF12-215ENST00000560190 TRAPPC8Q9Y2L5 1435 aa30.99■■■□□ 2.55
TCF12-215ENST00000560190 CEBPAP49715 358 aaPredicted RBP30.95■■■□□ 2.55
TCF12-215ENST00000560190 KIDINS220Q9ULH0 1771 aa30.93■■■□□ 2.54
TCF12-215ENST00000560190 MYT1LQ9UL68 1186 aa30.93■■■□□ 2.54
TCF12-215ENST00000560190 AGLP35573 1532 aa30.91■■■□□ 2.54
TCF12-215ENST00000560190 C3P01024 1663 aa30.9■■■□□ 2.54
TCF12-215ENST00000560190 SAMD9LQ8IVG5 1584 aa30.89■■■□□ 2.54
TCF12-215ENST00000560190 SYCP2Q9BX26 1530 aa30.86■■■□□ 2.53
TCF12-215ENST00000560190 STRCQ7RTU9 1775 aa30.85■■■□□ 2.53
TCF12-215ENST00000560190 UHRF1BP1Q6BDS2 1440 aa30.84■■■□□ 2.53
TCF12-215ENST00000560190 SETD1BQ9UPS6 1966 aaKnown RBP30.82■■■□□ 2.52
TCF12-215ENST00000560190 GPATCH8Q9UKJ3 1502 aaKnown RBP30.82■■■□□ 2.52
TCF12-215ENST00000560190 CERKQ8TCT0 537 aa30.76■■■□□ 2.51
TCF12-215ENST00000560190 ZNF777Q9ULD5 760 aaPredicted RBP30.75■■■□□ 2.51
TCF12-215ENST00000560190 INO80Q9ULG1 1556 aaPredicted RBP30.74■■■□□ 2.51
TCF12-215ENST00000560190 ATP7AQ04656 1500 aa30.73■■■□□ 2.51
TCF12-215ENST00000560190 SUPT6HQ7KZ85 1726 aaKnown RBP30.71■■■□□ 2.51
TCF12-215ENST00000560190 LOC105371045A0A1W2PR82 267 aa30.71■■■□□ 2.51
TCF12-215ENST00000560190 CNTLNQ9NXG0 1405 aa30.71■■■□□ 2.51
TCF12-215ENST00000560190 MROH2AA6NES4 1674 aa30.7■■■□□ 2.5
TCF12-215ENST00000560190 PLXNC1O60486 1568 aa30.7■■■□□ 2.5
TCF12-215ENST00000560190 ESF1Q9H501 851 aaKnown RBP30.68■■■□□ 2.5
TCF12-215ENST00000560190 KIAA1107Q9UPP5 1409 aa30.67■■■□□ 2.5
TCF12-215ENST00000560190 HNRNPMP52272 730 aaKnown RBP eCLIP30.67■■■□□ 2.59e-7■■■■□ 22.2
TCF12-215ENST00000560190 SPAG9O60271 1321 aaKnown RBP30.67■■■□□ 2.5
TCF12-215ENST00000560190 PLEKHH2Q8IVE3 1493 aa30.66■■■□□ 2.5
TCF12-215ENST00000560190 TIAM1Q13009 1591 aa30.66■■■□□ 2.5
TCF12-215ENST00000560190 CCNB3Q8WWL7 1395 aa30.66■■■□□ 2.5
TCF12-215ENST00000560190 MTUS2Q5JR59 1369 aa30.65■■■□□ 2.5
TCF12-215ENST00000560190 CFDP1Q9UEE9 299 aaPredicted RBP30.63■■■□□ 2.49
TCF12-215ENST00000560190 EHBP1L1Q8N3D4 1523 aa30.62■■■□□ 2.49
TCF12-215ENST00000560190 DMRT2Q9Y5R5 561 aa30.61■■■□□ 2.49
TCF12-215ENST00000560190 CLTCQ00610 1675 aaKnown RBP30.61■■■□□ 2.49
TCF12-215ENST00000560190 A2MP01023 1474 aa30.6■■■□□ 2.49
TCF12-215ENST00000560190 PTPRTO14522 1441 aa30.59■■■□□ 2.49
TCF12-215ENST00000560190 NPATQ14207 1427 aa30.58■■■□□ 2.49
TCF12-215ENST00000560190 NCOA1Q15788 1441 aa30.58■■■□□ 2.49
TCF12-215ENST00000560190 ADGBQ8N7X0 1667 aa30.55■■■□□ 2.48
TCF12-215ENST00000560190 ZMYM3Q14202 1370 aa30.54■■■□□ 2.48
TCF12-215ENST00000560190 MYO3AQ8NEV4 1616 aa30.54■■■□□ 2.48
TCF12-215ENST00000560190 CAMSAP1Q5T5Y3 1602 aa30.53■■■□□ 2.48
TCF12-215ENST00000560190 ZNF142P52746 1687 aaPredicted RBP30.52■■■□□ 2.48
TCF12-215ENST00000560190 CEP162Q5TB80 1403 aa30.52■■■□□ 2.48
TCF12-215ENST00000560190 MBD5Q9P267 1494 aa30.51■■■□□ 2.48
TCF12-215ENST00000560190 ZNF644Q9H582 1327 aaPredicted RBP30.51■■■□□ 2.48
TCF12-215ENST00000560190 LTBP4Q8N2S1 1624 aa30.51■■■□□ 2.47
TCF12-215ENST00000560190 PTPRKQ15262 1439 aa30.46■■■□□ 2.47
TCF12-215ENST00000560190 CEP170BQ9Y4F5 1589 aaPredicted RBP30.45■■■□□ 2.47
TCF12-215ENST00000560190 GGT6Q6P531 493 aa30.42■■■□□ 2.46
TCF12-215ENST00000560190 NCOA2Q15596 1464 aa30.4■■■□□ 2.46
TCF12-215ENST00000560190 RTEL1-TNFRSF6BF6WH68 1400 aa30.39■■■□□ 2.46
TCF12-215ENST00000560190 CAMSAP2Q08AD1 1489 aa30.39■■■□□ 2.46
TCF12-215ENST00000560190 PLA2R1Q13018 1463 aa30.38■■■□□ 2.45
TCF12-215ENST00000560190 CCDC141Q6ZP82 1450 aa30.38■■■□□ 2.45
TCF12-215ENST00000560190 IQSEC2Q5JU85 1478 aa30.36■■■□□ 2.45
TCF12-215ENST00000560190 TCOF1Q13428 1488 aaKnown RBP30.34■■■□□ 2.45
TCF12-215ENST00000560190 NCKAP5LQ9HCH0 1330 aa30.34■■■□□ 2.45
TCF12-215ENST00000560190 DHX29Q7Z478 1369 aaKnown RBP30.32■■■□□ 2.44
TCF12-215ENST00000560190 PPP6R1Q9UPN7 881 aa30.3■■■□□ 2.44
TCF12-215ENST00000560190 KDM5DQ9BY66 1539 aa30.28■■■□□ 2.44
TCF12-215ENST00000560190 DNMT1P26358 1616 aaKnown RBP30.28■■■□□ 2.44
TCF12-215ENST00000560190 ZNF335Q9H4Z2 1342 aaPredicted RBP30.27■■■□□ 2.44
TCF12-215ENST00000560190 A2ML1A8K2U0 1454 aa30.27■■■□□ 2.44
TCF12-215ENST00000560190 ARHGEF5Q12774 1597 aa30.27■■■□□ 2.44
TCF12-215ENST00000560190 FAM135AQ9P2D6 1515 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms