RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 RIMS1Q86UR5 1692 aaKnown RBP17.64■□□□□ 0.42
AP3S2-206ENST00000558806 YEATS2Q9ULM3 1422 aa17.64■□□□□ 0.42
AP3S2-206ENST00000558806 EFCAB2Q5VUJ9 269 aa17.63■□□□□ 0.41
AP3S2-206ENST00000558806 MYO5CQ9NQX4 1742 aa17.63■□□□□ 0.41
AP3S2-206ENST00000558806 KIF14Q15058 1648 aa17.62■□□□□ 0.41
AP3S2-206ENST00000558806 LMTK3Q96Q04 1460 aa17.62■□□□□ 0.41
AP3S2-206ENST00000558806 CLIP1P30622 1438 aa17.61■□□□□ 0.41
AP3S2-206ENST00000558806 TROQ12816 1431 aaPredicted RBP17.61■□□□□ 0.41
AP3S2-206ENST00000558806 SIGLEC1Q9BZZ2 1709 aa17.59■□□□□ 0.41
AP3S2-206ENST00000558806 ATP10AO60312 1499 aa17.57■□□□□ 0.4
AP3S2-206ENST00000558806 ZNF518AQ6AHZ1 1483 aa17.57■□□□□ 0.4
AP3S2-206ENST00000558806 ARHGAP5Q13017 1502 aa17.57■□□□□ 0.4
AP3S2-206ENST00000558806 C9orf84Q5VXU9 1444 aa17.56■□□□□ 0.4
AP3S2-206ENST00000558806 MLECQ14165 292 aa17.55■□□□□ 0.4
AP3S2-206ENST00000558806 FER1L4A9Z1Z3 1794 aa17.54■□□□□ 0.4
AP3S2-206ENST00000558806 FBXO41Q8TF61 875 aa17.54■□□□□ 0.4
AP3S2-206ENST00000558806 LRRIQ1Q96JM4 1722 aa17.54■□□□□ 0.4
AP3S2-206ENST00000558806 CCDC18Q5T9S5 1454 aa17.54■□□□□ 0.4
AP3S2-206ENST00000558806 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
AP3S2-206ENST00000558806 KDM5CP41229 1560 aa17.53■□□□□ 0.4
AP3S2-206ENST00000558806 ARHGEF12Q9NZN5 1544 aa17.52■□□□□ 0.4
AP3S2-206ENST00000558806 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
AP3S2-206ENST00000558806 AFAP1Q8N556 730 aa17.5■□□□□ 0.39
AP3S2-206ENST00000558806 HSPA2P54652 639 aa17.49■□□□□ 0.39
AP3S2-206ENST00000558806 CDC42BPBQ9Y5S2 1711 aa17.49■□□□□ 0.39
AP3S2-206ENST00000558806 PREX2Q70Z35 1606 aa17.48■□□□□ 0.39
AP3S2-206ENST00000558806 MYT1LQ9UL68 1186 aa17.48■□□□□ 0.39
AP3S2-206ENST00000558806 REREQ9P2R6 1566 aa17.46■□□□□ 0.39
AP3S2-206ENST00000558806 FYCO1Q9BQS8 1478 aa17.46■□□□□ 0.39
AP3S2-206ENST00000558806 MLH3Q9UHC1 1453 aa17.46■□□□□ 0.39
AP3S2-206ENST00000558806 ABCC1P33527 1531 aa17.46■□□□□ 0.39
AP3S2-206ENST00000558806 DIP2CQ9Y2E4 1556 aa17.45■□□□□ 0.38
AP3S2-206ENST00000558806 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
AP3S2-206ENST00000558806 TRAPPC8Q9Y2L5 1435 aa17.42■□□□□ 0.38
AP3S2-206ENST00000558806 ABCA6Q8N139 1617 aa17.42■□□□□ 0.38
AP3S2-206ENST00000558806 ITSN2Q9NZM3 1697 aa17.42■□□□□ 0.38
AP3S2-206ENST00000558806 CEBPAP49715 358 aaPredicted RBP17.4■□□□□ 0.38
AP3S2-206ENST00000558806 CDC42BPAQ5VT25 1732 aa17.4■□□□□ 0.38
AP3S2-206ENST00000558806 AGLP35573 1532 aa17.4■□□□□ 0.38
AP3S2-206ENST00000558806 ESF1Q9H501 851 aaKnown RBP17.37■□□□□ 0.37
AP3S2-206ENST00000558806 UHRF1BP1Q6BDS2 1440 aa17.37■□□□□ 0.37
AP3S2-206ENST00000558806 KIDINS220Q9ULH0 1771 aa17.35■□□□□ 0.37
AP3S2-206ENST00000558806 GPATCH8Q9UKJ3 1502 aaKnown RBP17.35■□□□□ 0.37
AP3S2-206ENST00000558806 SAMD9LQ8IVG5 1584 aa17.34■□□□□ 0.37
AP3S2-206ENST00000558806 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
AP3S2-206ENST00000558806 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.37
AP3S2-206ENST00000558806 CERKQ8TCT0 537 aa17.33■□□□□ 0.36
AP3S2-206ENST00000558806 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
AP3S2-206ENST00000558806 C3P01024 1663 aa17.32■□□□□ 0.36
AP3S2-206ENST00000558806 CNTLNQ9NXG0 1405 aa17.32■□□□□ 0.36
AP3S2-206ENST00000558806 SETD1BQ9UPS6 1966 aaKnown RBP17.32■□□□□ 0.36
AP3S2-206ENST00000558806 PLEKHH2Q8IVE3 1493 aa17.31■□□□□ 0.36
AP3S2-206ENST00000558806 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
AP3S2-206ENST00000558806 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
AP3S2-206ENST00000558806 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
AP3S2-206ENST00000558806 CFDP1Q9UEE9 299 aaPredicted RBP17.3■□□□□ 0.36
AP3S2-206ENST00000558806 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
AP3S2-206ENST00000558806 STRCQ7RTU9 1775 aa17.28■□□□□ 0.36
AP3S2-206ENST00000558806 HNRNPMP52272 730 aaKnown RBP eCLIP17.28■□□□□ 0.36
AP3S2-206ENST00000558806 ATP7AQ04656 1500 aa17.27■□□□□ 0.36
AP3S2-206ENST00000558806 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
AP3S2-206ENST00000558806 INO80Q9ULG1 1556 aaPredicted RBP17.25■□□□□ 0.35
AP3S2-206ENST00000558806 PLXNC1O60486 1568 aa17.23■□□□□ 0.35
AP3S2-206ENST00000558806 PTPRTO14522 1441 aa17.23■□□□□ 0.35
AP3S2-206ENST00000558806 NPATQ14207 1427 aa17.23■□□□□ 0.35
AP3S2-206ENST00000558806 EHBP1L1Q8N3D4 1523 aa17.23■□□□□ 0.35
AP3S2-206ENST00000558806 SUPT6HQ7KZ85 1726 aaKnown RBP17.23■□□□□ 0.35
AP3S2-206ENST00000558806 A2MP01023 1474 aa17.23■□□□□ 0.35
AP3S2-206ENST00000558806 ZMYM3Q14202 1370 aa17.22■□□□□ 0.35
AP3S2-206ENST00000558806 TIAM1Q13009 1591 aa17.21■□□□□ 0.35
AP3S2-206ENST00000558806 NCOA1Q15788 1441 aa17.19■□□□□ 0.34
AP3S2-206ENST00000558806 CEP162Q5TB80 1403 aa17.19■□□□□ 0.34
AP3S2-206ENST00000558806 CLTCQ00610 1675 aaKnown RBP17.17■□□□□ 0.34
AP3S2-206ENST00000558806 ADGBQ8N7X0 1667 aa17.17■□□□□ 0.34
AP3S2-206ENST00000558806 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
AP3S2-206ENST00000558806 MBD5Q9P267 1494 aa17.17■□□□□ 0.34
AP3S2-206ENST00000558806 ZNF644Q9H582 1327 aaPredicted RBP17.17■□□□□ 0.34
AP3S2-206ENST00000558806 RTEL1-TNFRSF6BF6WH68 1400 aa17.16■□□□□ 0.34
AP3S2-206ENST00000558806 GGT6Q6P531 493 aa17.16■□□□□ 0.34
AP3S2-206ENST00000558806 CAMSAP1Q5T5Y3 1602 aa17.15■□□□□ 0.34
AP3S2-206ENST00000558806 PTPRKQ15262 1439 aa17.13■□□□□ 0.33
AP3S2-206ENST00000558806 MYO3AQ8NEV4 1616 aa17.12■□□□□ 0.33
AP3S2-206ENST00000558806 ZNF142P52746 1687 aaPredicted RBP17.12■□□□□ 0.33
AP3S2-206ENST00000558806 LTBP4Q8N2S1 1624 aa17.11■□□□□ 0.33
AP3S2-206ENST00000558806 DHX29Q7Z478 1369 aaKnown RBP17.11■□□□□ 0.33
AP3S2-206ENST00000558806 PLA2R1Q13018 1463 aa17.11■□□□□ 0.33
AP3S2-206ENST00000558806 NCOA2Q15596 1464 aa17.11■□□□□ 0.33
AP3S2-206ENST00000558806 IQSEC2Q5JU85 1478 aa17.11■□□□□ 0.33
AP3S2-206ENST00000558806 CCDC141Q6ZP82 1450 aa17.11■□□□□ 0.33
AP3S2-206ENST00000558806 RSPH4AQ5TD94 716 aa17.1■□□□□ 0.33
AP3S2-206ENST00000558806 CEP170BQ9Y4F5 1589 aaPredicted RBP17.1■□□□□ 0.33
AP3S2-206ENST00000558806 CAMSAP2Q08AD1 1489 aa17.09■□□□□ 0.33
AP3S2-206ENST00000558806 PKD2Q13563 968 aa17.08■□□□□ 0.32
AP3S2-206ENST00000558806 NCKAP5LQ9HCH0 1330 aa17.07■□□□□ 0.32
AP3S2-206ENST00000558806 FAM135AQ9P2D6 1515 aa17.06■□□□□ 0.32
AP3S2-206ENST00000558806 TCOF1Q13428 1488 aaKnown RBP17.05■□□□□ 0.32
AP3S2-206ENST00000558806 KIF3BO15066 747 aa17.05■□□□□ 0.32
AP3S2-206ENST00000558806 KDM5DQ9BY66 1539 aa17.04■□□□□ 0.32
AP3S2-206ENST00000558806 A2ML1A8K2U0 1454 aa17.04■□□□□ 0.32
AP3S2-206ENST00000558806 ARHGEF5Q12774 1597 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms