RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 ADGRL1O94910 1474 aa31.41■■■□□ 2.62
HIF1A-211ENST00000557446 TIAM1Q13009 1591 aa31.41■■■□□ 2.62
HIF1A-211ENST00000557446 RAPGEF3O95398 923 aa31.39■■■□□ 2.62
HIF1A-211ENST00000557446 EFCAB2Q5VUJ9 269 aa31.37■■■□□ 2.61
HIF1A-211ENST00000557446 SCAPERQ9BY12 1400 aa31.32■■■□□ 2.61
HIF1A-211ENST00000557446 ZMYM4Q5VZL5 1548 aa31.31■■■□□ 2.6
HIF1A-211ENST00000557446 POGZQ7Z3K3 1410 aa31.31■■■□□ 2.6
HIF1A-211ENST00000557446 SUPT6HQ7KZ85 1726 aaKnown RBP31.29■■■□□ 2.6
HIF1A-211ENST00000557446 GPATCH8Q9UKJ3 1502 aaKnown RBP31.29■■■□□ 2.6
HIF1A-211ENST00000557446 ABCC1P33527 1531 aa31.28■■■□□ 2.6
HIF1A-211ENST00000557446 ITSN2Q9NZM3 1697 aa31.27■■■□□ 2.6
HIF1A-211ENST00000557446 MAP3K1Q13233 1512 aa31.27■■■□□ 2.6
HIF1A-211ENST00000557446 ARHGEF40Q8TER5 1519 aa31.27■■■□□ 2.6
HIF1A-211ENST00000557446 CCNB3Q8WWL7 1395 aa31.26■■■□□ 2.59
HIF1A-211ENST00000557446 SAMD9LQ8IVG5 1584 aa31.23■■■□□ 2.59
HIF1A-211ENST00000557446 LRRC9Q6ZRR7 1453 aa31.23■■■□□ 2.59
HIF1A-211ENST00000557446 ZFYVE16Q7Z3T8 1539 aa31.21■■■□□ 2.59
HIF1A-211ENST00000557446 NCOA2Q15596 1464 aa31.21■■■□□ 2.59
HIF1A-211ENST00000557446 ZNF518AQ6AHZ1 1483 aa31.21■■■□□ 2.59
HIF1A-211ENST00000557446 KDM5CP41229 1560 aa31.19■■■□□ 2.58
HIF1A-211ENST00000557446 MAGI2Q86UL8 1455 aa31.18■■■□□ 2.58
HIF1A-211ENST00000557446 ARHGEF12Q9NZN5 1544 aa31.18■■■□□ 2.58
HIF1A-211ENST00000557446 KDM4FA0A1W2PPD8 638 aa31.16■■■□□ 2.58
HIF1A-211ENST00000557446 AEBP2Q6ZN18 517 aaPredicted RBP31.16■■■□□ 2.58
HIF1A-211ENST00000557446 SYCP2Q9BX26 1530 aa31.15■■■□□ 2.58
HIF1A-211ENST00000557446 ZNF777Q9ULD5 760 aaPredicted RBP31.15■■■□□ 2.58
HIF1A-211ENST00000557446 YEATS2Q9ULM3 1422 aa31.15■■■□□ 2.58
HIF1A-211ENST00000557446 CFDP1Q9UEE9 299 aaPredicted RBP31.14■■■□□ 2.58
HIF1A-211ENST00000557446 HECW2Q9P2P5 1572 aa31.13■■■□□ 2.57
HIF1A-211ENST00000557446 TRAPPC8Q9Y2L5 1435 aa31.12■■■□□ 2.57
HIF1A-211ENST00000557446 PLEKHH2Q8IVE3 1493 aa31.1■■■□□ 2.57
HIF1A-211ENST00000557446 APLP2Q06481 763 aa31.1■■■□□ 2.57
HIF1A-211ENST00000557446 KANK4Q5T7N3 995 aaPredicted RBP31.1■■■□□ 2.57
HIF1A-211ENST00000557446 AFAP1Q8N556 730 aa31.09■■■□□ 2.57
HIF1A-211ENST00000557446 KIAA1107Q9UPP5 1409 aa31.06■■■□□ 2.56
HIF1A-211ENST00000557446 SIGLEC1Q9BZZ2 1709 aa31.05■■■□□ 2.56
HIF1A-211ENST00000557446 ABCA6Q8N139 1617 aa31.02■■■□□ 2.56
HIF1A-211ENST00000557446 MLH3Q9UHC1 1453 aa31.02■■■□□ 2.56
HIF1A-211ENST00000557446 BCORL1Q5H9F3 1711 aa31.02■■■□□ 2.56
HIF1A-211ENST00000557446 DIP2CQ9Y2E4 1556 aa31.02■■■□□ 2.56
HIF1A-211ENST00000557446 KIDINS220Q9ULH0 1771 aa31.01■■■□□ 2.55
HIF1A-211ENST00000557446 ATP10AO60312 1499 aa31■■■□□ 2.55
HIF1A-211ENST00000557446 ARID4BQ4LE39 1312 aaPredicted RBP30.99■■■□□ 2.55
HIF1A-211ENST00000557446 C9orf84Q5VXU9 1444 aa30.99■■■□□ 2.55
HIF1A-211ENST00000557446 HNRNPMP52272 730 aaKnown RBP eCLIP30.99■■■□□ 2.558e-8■□□□□ 11.2
HIF1A-211ENST00000557446 MYT1LQ9UL68 1186 aa30.99■■■□□ 2.55
HIF1A-211ENST00000557446 CAMSAP2Q08AD1 1489 aa30.99■■■□□ 2.55
HIF1A-211ENST00000557446 ZNF644Q9H582 1327 aaPredicted RBP30.98■■■□□ 2.55
HIF1A-211ENST00000557446 ADAMTSL3P82987 1691 aa30.98■■■□□ 2.55
HIF1A-211ENST00000557446 INO80Q9ULG1 1556 aaPredicted RBP30.94■■■□□ 2.54
HIF1A-211ENST00000557446 MYOM3Q5VTT5 1437 aa30.93■■■□□ 2.54
HIF1A-211ENST00000557446 MBD5Q9P267 1494 aa30.93■■■□□ 2.54
HIF1A-211ENST00000557446 ATP7AQ04656 1500 aa30.93■■■□□ 2.54
HIF1A-211ENST00000557446 REREQ9P2R6 1566 aa30.92■■■□□ 2.54
HIF1A-211ENST00000557446 MADDQ8WXG6 1647 aa30.91■■■□□ 2.54
HIF1A-211ENST00000557446 SPAG9O60271 1321 aaKnown RBP30.9■■■□□ 2.54
HIF1A-211ENST00000557446 MIA2Q96PC5 1412 aa30.87■■■□□ 2.53
HIF1A-211ENST00000557446 CCDC141Q6ZP82 1450 aa30.87■■■□□ 2.53
HIF1A-211ENST00000557446 ARHGEF5Q12774 1597 aa30.85■■■□□ 2.53
HIF1A-211ENST00000557446 RIMS1Q86UR5 1692 aaKnown RBP30.83■■■□□ 2.53
HIF1A-211ENST00000557446 FER1L4A9Z1Z3 1794 aa30.82■■■□□ 2.52
HIF1A-211ENST00000557446 AGLP35573 1532 aa30.8■■■□□ 2.52
HIF1A-211ENST00000557446 PTPN23Q9H3S7 1636 aa30.8■■■□□ 2.52
HIF1A-211ENST00000557446 ADGBQ8N7X0 1667 aa30.79■■■□□ 2.52
HIF1A-211ENST00000557446 MLECQ14165 292 aa30.79■■■□□ 2.52
HIF1A-211ENST00000557446 PTPRMP28827 1452 aa30.77■■■□□ 2.52
HIF1A-211ENST00000557446 RTEL1-TNFRSF6BF6WH68 1400 aa30.76■■■□□ 2.51
HIF1A-211ENST00000557446 PLXNC1O60486 1568 aa30.75■■■□□ 2.51
HIF1A-211ENST00000557446 FGD6Q6ZV73 1430 aa30.75■■■□□ 2.51
HIF1A-211ENST00000557446 RSPH4AQ5TD94 716 aa30.75■■■□□ 2.51
HIF1A-211ENST00000557446 A2MP01023 1474 aa30.73■■■□□ 2.51
HIF1A-211ENST00000557446 MAST1Q9Y2H9 1570 aa30.7■■■□□ 2.5
HIF1A-211ENST00000557446 TCOF1Q13428 1488 aaKnown RBP30.7■■■□□ 2.5
HIF1A-211ENST00000557446 CROCC2H7BZ55 1655 aa30.69■■■□□ 2.5
HIF1A-211ENST00000557446 TSPY4P0CV99 314 aa30.65■■■□□ 2.5
HIF1A-211ENST00000557446 TSPY10P0CW01 314 aa30.65■■■□□ 2.5
HIF1A-211ENST00000557446 DNMT1P26358 1616 aaKnown RBP30.65■■■□□ 2.5
HIF1A-211ENST00000557446 SHANK2Q9UPX8 1470 aa30.59■■■□□ 2.49
HIF1A-211ENST00000557446 ABCC5O15440 1437 aa30.58■■■□□ 2.49
HIF1A-211ENST00000557446 DAPK1P53355 1430 aa30.58■■■□□ 2.49
HIF1A-211ENST00000557446 DHX29Q7Z478 1369 aaKnown RBP30.57■■■□□ 2.48
HIF1A-211ENST00000557446 PPARGC1BQ86YN6 1023 aaKnown RBP30.56■■■□□ 2.48
HIF1A-211ENST00000557446 PLPPR3Q6T4P5 718 aa30.55■■■□□ 2.48
HIF1A-211ENST00000557446 C3P01024 1663 aa30.52■■■□□ 2.48
HIF1A-211ENST00000557446 ESF1Q9H501 851 aaKnown RBP30.51■■■□□ 2.47
HIF1A-211ENST00000557446 MROH2AA6NES4 1674 aa30.51■■■□□ 2.47
HIF1A-211ENST00000557446 CNTLNQ9NXG0 1405 aa30.5■■■□□ 2.47
HIF1A-211ENST00000557446 CLTCQ00610 1675 aaKnown RBP30.5■■■□□ 2.47
HIF1A-211ENST00000557446 FAM50AQ14320 339 aaKnown RBP30.49■■■□□ 2.47
HIF1A-211ENST00000557446 EIF2AK4Q9P2K8 1649 aaKnown RBP30.47■■■□□ 2.47
HIF1A-211ENST00000557446 GGT6Q6P531 493 aa30.47■■■□□ 2.47
HIF1A-211ENST00000557446 DUOX2Q9NRD8 1548 aa30.46■■■□□ 2.47
HIF1A-211ENST00000557446 KIF3BO15066 747 aa30.44■■■□□ 2.46
HIF1A-211ENST00000557446 CEBPAP49715 358 aaPredicted RBP30.44■■■□□ 2.46
HIF1A-211ENST00000557446 KIF15Q9NS87 1388 aa30.42■■■□□ 2.46
HIF1A-211ENST00000557446 RNF17Q9BXT8 1623 aaKnown RBP30.42■■■□□ 2.46
HIF1A-211ENST00000557446 PREX1Q8TCU6 1659 aa30.4■■■□□ 2.46
HIF1A-211ENST00000557446 LMTK3Q96Q04 1460 aa30.39■■■□□ 2.46
HIF1A-211ENST00000557446 FAM135AQ9P2D6 1515 aa30.39■■■□□ 2.46
HIF1A-211ENST00000557446 ANKRD30AQ9BXX3 1397 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms