RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 DENND4BO75064 1496 aaPredicted RBP18.55■□□□□ 0.56
HNRNPC-231ENST00000557336 ILDR1Q86SU0 546 aaPredicted RBP18.55■□□□□ 0.56
HNRNPC-231ENST00000557336 PTPRMP28827 1452 aa18.54■□□□□ 0.56
HNRNPC-231ENST00000557336 RICTORQ6R327 1708 aa18.54■□□□□ 0.56
HNRNPC-231ENST00000557336 PLCH2O75038 1416 aa18.5■□□□□ 0.55
HNRNPC-231ENST00000557336 FMN1Q68DA7 1419 aa18.5■□□□□ 0.55
HNRNPC-231ENST00000557336 YEATS2Q9ULM3 1422 aa18.49■□□□□ 0.55
HNRNPC-231ENST00000557336 ARHGEF40Q8TER5 1519 aa18.49■□□□□ 0.55
HNRNPC-231ENST00000557336 BCORL1Q5H9F3 1711 aa18.49■□□□□ 0.55
HNRNPC-231ENST00000557336 ZMYM4Q5VZL5 1548 aa18.48■□□□□ 0.55
HNRNPC-231ENST00000557336 ARID4BQ4LE39 1312 aaPredicted RBP18.48■□□□□ 0.55
HNRNPC-231ENST00000557336 ATP1B4Q9UN42 357 aaPredicted RBP18.47■□□□□ 0.55
HNRNPC-231ENST00000557336 CFAP74Q9C0B2 1584 aa18.47■□□□□ 0.55
HNRNPC-231ENST00000557336 SIGLEC1Q9BZZ2 1709 aa18.46■□□□□ 0.55
HNRNPC-231ENST00000557336 MADDQ8WXG6 1647 aa18.46■□□□□ 0.55
HNRNPC-231ENST00000557336 SCAPERQ9BY12 1400 aa18.46■□□□□ 0.55
HNRNPC-231ENST00000557336 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
HNRNPC-231ENST00000557336 POGZQ7Z3K3 1410 aa18.43■□□□□ 0.54
HNRNPC-231ENST00000557336 KIF14Q15058 1648 aa18.42■□□□□ 0.54
HNRNPC-231ENST00000557336 MAGI2Q86UL8 1455 aa18.42■□□□□ 0.54
HNRNPC-231ENST00000557336 TROQ12816 1431 aaPredicted RBP18.41■□□□□ 0.54
HNRNPC-231ENST00000557336 ZFYVE16Q7Z3T8 1539 aa18.41■□□□□ 0.54
HNRNPC-231ENST00000557336 LRRIQ1Q96JM4 1722 aa18.4■□□□□ 0.54
HNRNPC-231ENST00000557336 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
HNRNPC-231ENST00000557336 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
HNRNPC-231ENST00000557336 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.53
HNRNPC-231ENST00000557336 RIMS1Q86UR5 1692 aaKnown RBP18.36■□□□□ 0.53
HNRNPC-231ENST00000557336 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
HNRNPC-231ENST00000557336 PCF11O94913 1555 aaKnown RBP18.35■□□□□ 0.53
HNRNPC-231ENST00000557336 CASKIN1Q8WXD9 1431 aa18.35■□□□□ 0.53
HNRNPC-231ENST00000557336 AFAP1Q8N556 730 aa18.35■□□□□ 0.53
HNRNPC-231ENST00000557336 ATP10AO60312 1499 aa18.33■□□□□ 0.53
HNRNPC-231ENST00000557336 MLECQ14165 292 aa18.33■□□□□ 0.52
HNRNPC-231ENST00000557336 ARHGAP5Q13017 1502 aa18.31■□□□□ 0.52
HNRNPC-231ENST00000557336 CLIP1P30622 1438 aa18.31■□□□□ 0.52
HNRNPC-231ENST00000557336 KDM5CP41229 1560 aa18.3■□□□□ 0.52
HNRNPC-231ENST00000557336 ARHGEF12Q9NZN5 1544 aa18.3■□□□□ 0.52
HNRNPC-231ENST00000557336 ZNF518AQ6AHZ1 1483 aa18.3■□□□□ 0.52
HNRNPC-231ENST00000557336 HSPA2P54652 639 aa18.29■□□□□ 0.52
HNRNPC-231ENST00000557336 C9orf84Q5VXU9 1444 aa18.29■□□□□ 0.52
HNRNPC-231ENST00000557336 CDC42BPBQ9Y5S2 1711 aa18.29■□□□□ 0.52
HNRNPC-231ENST00000557336 TRAPPC8Q9Y2L5 1435 aa18.27■□□□□ 0.52
HNRNPC-231ENST00000557336 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
HNRNPC-231ENST00000557336 CEBPAP49715 358 aaPredicted RBP18.24■□□□□ 0.51
HNRNPC-231ENST00000557336 FYCO1Q9BQS8 1478 aa18.24■□□□□ 0.51
HNRNPC-231ENST00000557336 MLH3Q9UHC1 1453 aa18.24■□□□□ 0.51
HNRNPC-231ENST00000557336 DIP2CQ9Y2E4 1556 aa18.24■□□□□ 0.51
HNRNPC-231ENST00000557336 PREX2Q70Z35 1606 aa18.23■□□□□ 0.51
HNRNPC-231ENST00000557336 ABCC1P33527 1531 aa18.23■□□□□ 0.51
HNRNPC-231ENST00000557336 FER1L4A9Z1Z3 1794 aa18.22■□□□□ 0.51
HNRNPC-231ENST00000557336 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
HNRNPC-231ENST00000557336 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
HNRNPC-231ENST00000557336 ABCA6Q8N139 1617 aa18.2■□□□□ 0.5
HNRNPC-231ENST00000557336 REREQ9P2R6 1566 aa18.2■□□□□ 0.5
HNRNPC-231ENST00000557336 GPATCH8Q9UKJ3 1502 aaKnown RBP18.18■□□□□ 0.5
HNRNPC-231ENST00000557336 CDC42BPAQ5VT25 1732 aa18.18■□□□□ 0.5
HNRNPC-231ENST00000557336 ITSN2Q9NZM3 1697 aa18.16■□□□□ 0.5
HNRNPC-231ENST00000557336 AGLP35573 1532 aa18.16■□□□□ 0.5
HNRNPC-231ENST00000557336 KIDINS220Q9ULH0 1771 aa18.15■□□□□ 0.5
HNRNPC-231ENST00000557336 MYT1LQ9UL68 1186 aa18.15■□□□□ 0.5
HNRNPC-231ENST00000557336 SAMD9LQ8IVG5 1584 aa18.14■□□□□ 0.49
HNRNPC-231ENST00000557336 HNRNPMP52272 730 aaKnown RBP eCLIP18.13■□□□□ 0.492e-7■■■□□ 16.8
HNRNPC-231ENST00000557336 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
HNRNPC-231ENST00000557336 SYCP2Q9BX26 1530 aa18.1■□□□□ 0.49
HNRNPC-231ENST00000557336 PREX1Q8TCU6 1659 aa18.09■□□□□ 0.49
HNRNPC-231ENST00000557336 KIAA1107Q9UPP5 1409 aa18.08■□□□□ 0.49
HNRNPC-231ENST00000557336 CFDP1Q9UEE9 299 aaPredicted RBP18.08■□□□□ 0.48
HNRNPC-231ENST00000557336 SPAG9O60271 1321 aaKnown RBP18.07■□□□□ 0.48
HNRNPC-231ENST00000557336 ZNF644Q9H582 1327 aaPredicted RBP18.07■□□□□ 0.48
HNRNPC-231ENST00000557336 CCNB3Q8WWL7 1395 aa18.06■□□□□ 0.48
HNRNPC-231ENST00000557336 C3P01024 1663 aa18.06■□□□□ 0.48
HNRNPC-231ENST00000557336 SLC4A2P04920 1241 aa18.06■□□□□ 0.48
HNRNPC-231ENST00000557336 MTUS2Q5JR59 1369 aa18.05■□□□□ 0.48
HNRNPC-231ENST00000557336 STRCQ7RTU9 1775 aa18.05■□□□□ 0.48
HNRNPC-231ENST00000557336 SETD1BQ9UPS6 1966 aaKnown RBP18.05■□□□□ 0.48
HNRNPC-231ENST00000557336 CERKQ8TCT0 537 aa18.05■□□□□ 0.48
HNRNPC-231ENST00000557336 UHRF1BP1Q6BDS2 1440 aa18.05■□□□□ 0.48
HNRNPC-231ENST00000557336 CEP162Q5TB80 1403 aa18.04■□□□□ 0.48
HNRNPC-231ENST00000557336 MBD5Q9P267 1494 aa18.02■□□□□ 0.48
HNRNPC-231ENST00000557336 INO80Q9ULG1 1556 aaPredicted RBP18.02■□□□□ 0.48
HNRNPC-231ENST00000557336 ATP7AQ04656 1500 aa18.02■□□□□ 0.47
HNRNPC-231ENST00000557336 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
HNRNPC-231ENST00000557336 PLXNC1O60486 1568 aa18.01■□□□□ 0.47
HNRNPC-231ENST00000557336 TIAM1Q13009 1591 aa18.01■□□□□ 0.47
HNRNPC-231ENST00000557336 CNTLNQ9NXG0 1405 aa18.01■□□□□ 0.47
HNRNPC-231ENST00000557336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.475e-21■□□□□ 9.7
HNRNPC-231ENST00000557336 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
HNRNPC-231ENST00000557336 ZMYM3Q14202 1370 aa17.99■□□□□ 0.47
HNRNPC-231ENST00000557336 A2MP01023 1474 aa17.99■□□□□ 0.47
HNRNPC-231ENST00000557336 EHBP1L1Q8N3D4 1523 aa17.98■□□□□ 0.47
HNRNPC-231ENST00000557336 SUPT6HQ7KZ85 1726 aaKnown RBP17.97■□□□□ 0.47
HNRNPC-231ENST00000557336 NPATQ14207 1427 aa17.96■□□□□ 0.47
HNRNPC-231ENST00000557336 PTPRTO14522 1441 aa17.95■□□□□ 0.46
HNRNPC-231ENST00000557336 MROH2AA6NES4 1674 aa17.94■□□□□ 0.46
HNRNPC-231ENST00000557336 LOC105371045A0A1W2PR82 267 aa17.94■□□□□ 0.46
HNRNPC-231ENST00000557336 NCOA1Q15788 1441 aa17.93■□□□□ 0.46
HNRNPC-231ENST00000557336 GGT6Q6P531 493 aa17.93■□□□□ 0.46
HNRNPC-231ENST00000557336 RTEL1-TNFRSF6BF6WH68 1400 aa17.92■□□□□ 0.46
HNRNPC-231ENST00000557336 PTPRKQ15262 1439 aa17.92■□□□□ 0.46
HNRNPC-231ENST00000557336 NCOA2Q15596 1464 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms