RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 DOK7Q18PE1 504 aa13.66□□□□□ -0.22
HIF1A-209ENST00000556827 ZNF710Q8N1W2 664 aa13.65□□□□□ -0.22
HIF1A-209ENST00000556827 HOXB3P14651 431 aaPredicted RBP13.64□□□□□ -0.23
HIF1A-209ENST00000556827 MARVELD3Q96A59 401 aa13.63□□□□□ -0.23
HIF1A-209ENST00000556827 RIMBP2O15034 1052 aa13.61□□□□□ -0.23
HIF1A-209ENST00000556827 TMC2Q8TDI7 906 aa13.6□□□□□ -0.23
HIF1A-209ENST00000556827 C2orf72A6NCS6 295 aa13.59□□□□□ -0.23
HIF1A-209ENST00000556827 EMP3P54852 163 aa13.59□□□□□ -0.23
HIF1A-209ENST00000556827 PCDH10Q9P2E7 1040 aa13.56□□□□□ -0.24
HIF1A-209ENST00000556827 KIF3CO14782 793 aa13.55□□□□□ -0.24
HIF1A-209ENST00000556827 GTPBP6O43824 516 aaPredicted RBP13.52□□□□□ -0.25
HIF1A-209ENST00000556827 HOXB1P14653 301 aaPredicted RBP13.51□□□□□ -0.25
HIF1A-209ENST00000556827 CDAN1Q8IWY9 1227 aa13.51□□□□□ -0.25
HIF1A-209ENST00000556827 ZSWIM6Q9HCJ5 1215 aa13.5□□□□□ -0.25
HIF1A-209ENST00000556827 FAM205CA6NFA0 338 aa13.48□□□□□ -0.25
HIF1A-209ENST00000556827 HS3ST6Q96QI5 342 aa13.44□□□□□ -0.26
HIF1A-209ENST00000556827 ARSIQ5FYB1 569 aa13.43□□□□□ -0.26
HIF1A-209ENST00000556827 BBXQ8WY36 941 aaPredicted RBP13.43□□□□□ -0.26
HIF1A-209ENST00000556827 GPHNQ9NQX3 736 aaPredicted RBP13.43□□□□□ -0.26
HIF1A-209ENST00000556827 ERBB3P21860 1342 aa13.42□□□□□ -0.26
HIF1A-209ENST00000556827 GPR153Q6NV75 609 aa13.42□□□□□ -0.26
HIF1A-209ENST00000556827 FOXK1P85037 733 aa13.39□□□□□ -0.27
HIF1A-209ENST00000556827 PLPP6Q8IY26 295 aa13.39□□□□□ -0.27
HIF1A-209ENST00000556827 DSG2Q14126 1118 aa13.38□□□□□ -0.27
HIF1A-209ENST00000556827 POTEB3A0JP26 581 aa13.37□□□□□ -0.27
HIF1A-209ENST00000556827 SLC34A2O95436 690 aa13.37□□□□□ -0.27
HIF1A-209ENST00000556827 POTEBQ6S5H4 581 aa13.37□□□□□ -0.27
HIF1A-209ENST00000556827 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.27
HIF1A-209ENST00000556827 CRISPLD2Q9H0B8 497 aa13.36□□□□□ -0.27
HIF1A-209ENST00000556827 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
HIF1A-209ENST00000556827 VARS2Q5ST30 1063 aaKnown RBP13.35□□□□□ -0.27
HIF1A-209ENST00000556827 PCDHGA4Q9Y5G9 962 aa13.35□□□□□ -0.27
HIF1A-209ENST00000556827 PDE4AP27815 886 aa13.33□□□□□ -0.28
HIF1A-209ENST00000556827 NUDT7P0C024 238 aa13.32□□□□□ -0.28
HIF1A-209ENST00000556827 NCKAP5LQ9HCH0 1330 aa13.32□□□□□ -0.28
HIF1A-209ENST00000556827 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
HIF1A-209ENST00000556827 SPRYD3Q8NCJ5 442 aa13.29□□□□□ -0.28
HIF1A-209ENST00000556827 ZNF316A6NFI3 1004 aaPredicted RBP13.28□□□□□ -0.28
HIF1A-209ENST00000556827 LARP6Q9BRS8 491 aaKnown RBP13.28□□□□□ -0.28
HIF1A-209ENST00000556827 PTCD2Q8WV60 388 aaKnown RBP13.27□□□□□ -0.29
HIF1A-209ENST00000556827 DDX27Q96GQ7 796 aaKnown RBP13.25□□□□□ -0.29
HIF1A-209ENST00000556827 TBC1D12O60347 775 aa13.24□□□□□ -0.29
HIF1A-209ENST00000556827 CADPS2Q86UW7 1296 aa13.24□□□□□ -0.29
HIF1A-209ENST00000556827 UPF1Q92900 1129 aaKnown RBP eCLIP13.24□□□□□ -0.29
HIF1A-209ENST00000556827 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
HIF1A-209ENST00000556827 KRTAP3-3Q9BYR6 98 aa13.24□□□□□ -0.29
HIF1A-209ENST00000556827 KRTAP3-2Q9BYR7 98 aa13.24□□□□□ -0.29
HIF1A-209ENST00000556827 PAXIP1Q6ZW49 1069 aaPredicted RBP13.23□□□□□ -0.29
HIF1A-209ENST00000556827 LHX6Q9UPM6 363 aa13.22□□□□□ -0.29
HIF1A-209ENST00000556827 ZNF687Q8N1G0 1237 aa13.21□□□□□ -0.29
HIF1A-209ENST00000556827 MFSD10Q14728 455 aa13.19□□□□□ -0.3
HIF1A-209ENST00000556827 OXER1Q8TDS5 423 aa13.18□□□□□ -0.3
HIF1A-209ENST00000556827 SPNS2Q8IVW8 549 aa13.15□□□□□ -0.3
HIF1A-209ENST00000556827 PSDA5PKW4 1024 aaPredicted RBP13.14□□□□□ -0.31
HIF1A-209ENST00000556827 KDM4FA0A1W2PPD8 638 aa13.13□□□□□ -0.31
HIF1A-209ENST00000556827 PBX2P40425 430 aa13.08□□□□□ -0.32
HIF1A-209ENST00000556827 MAP3K9P80192 1104 aa13.08□□□□□ -0.32
HIF1A-209ENST00000556827 MMRN1Q13201 1228 aa13.07□□□□□ -0.32
HIF1A-209ENST00000556827 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
HIF1A-209ENST00000556827 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
HIF1A-209ENST00000556827 ANKRD13DQ6ZTN6 518 aa13.05□□□□□ -0.32
HIF1A-209ENST00000556827 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
HIF1A-209ENST00000556827 EVI5O60447 810 aa13.04□□□□□ -0.32
HIF1A-209ENST00000556827 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
HIF1A-209ENST00000556827 ZNF454Q8N9F8 522 aa13.02□□□□□ -0.33
HIF1A-209ENST00000556827 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
HIF1A-209ENST00000556827 CAMK2BQ13554 666 aa12.99□□□□□ -0.33
HIF1A-209ENST00000556827 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
HIF1A-209ENST00000556827 WDR70Q9NW82 654 aa12.99□□□□□ -0.33
HIF1A-209ENST00000556827 KCNH8Q96L42 1107 aa12.98□□□□□ -0.33
HIF1A-209ENST00000556827 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
HIF1A-209ENST00000556827 DPYSL4O14531 572 aa12.96□□□□□ -0.33
HIF1A-209ENST00000556827 JPH4Q96JJ6 628 aa12.96□□□□□ -0.33
HIF1A-209ENST00000556827 FOSBP53539 338 aa12.95□□□□□ -0.34
HIF1A-209ENST00000556827 KCNK17Q96T54 332 aa12.95□□□□□ -0.34
HIF1A-209ENST00000556827 PSEN2P49810 448 aa12.94□□□□□ -0.34
HIF1A-209ENST00000556827 PTGER2P43116 358 aa12.93□□□□□ -0.34
HIF1A-209ENST00000556827 MYT1LQ9UL68 1186 aa12.93□□□□□ -0.34
HIF1A-209ENST00000556827 E2F4Q16254 413 aa12.91□□□□□ -0.34
HIF1A-209ENST00000556827 TSHZ2Q9NRE2 1034 aa12.91□□□□□ -0.34
HIF1A-209ENST00000556827 DMRTA1Q5VZB9 504 aa12.9□□□□□ -0.34
HIF1A-209ENST00000556827 ZDHHC16Q969W1 377 aa12.9□□□□□ -0.34
HIF1A-209ENST00000556827 RNF166Q96A37 237 aaPredicted RBP12.9□□□□□ -0.34
HIF1A-209ENST00000556827 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
HIF1A-209ENST00000556827 ADGRD1Q6QNK2 874 aa12.88□□□□□ -0.35
HIF1A-209ENST00000556827 PTPREP23469 700 aa12.86□□□□□ -0.35
HIF1A-209ENST00000556827 TK2O00142 265 aa12.85□□□□□ -0.35
HIF1A-209ENST00000556827 ADAM33Q9BZ11 813 aa12.85□□□□□ -0.35
HIF1A-209ENST00000556827 PCDHGA10Q9Y5H3 936 aa12.85□□□□□ -0.35
HIF1A-209ENST00000556827 PHF14O94880 888 aa12.83□□□□□ -0.36
HIF1A-209ENST00000556827 PLCB2Q00722 1185 aa12.83□□□□□ -0.36
HIF1A-209ENST00000556827 TYW1BQ6NUM6 668 aa12.83□□□□□ -0.36
HIF1A-209ENST00000556827 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
HIF1A-209ENST00000556827 PDIA6Q15084 440 aa12.81□□□□□ -0.36
HIF1A-209ENST00000556827 DDX12PQ92771 950 aa12.81□□□□□ -0.36
HIF1A-209ENST00000556827 SPDYE16A6NNV3 312 aaPredicted RBP12.8□□□□□ -0.36
HIF1A-209ENST00000556827 STAC3Q96MF2 364 aa12.79□□□□□ -0.36
HIF1A-209ENST00000556827 EPAS1Q99814 870 aa12.79□□□□□ -0.36
HIF1A-209ENST00000556827 VPS9D1Q9Y2B5 631 aa12.77□□□□□ -0.37
HIF1A-209ENST00000556827 ARIH1Q9Y4X5 557 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms