RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 GPHNQ9NQX3 736 aaPredicted RBP8.41□□□□□ -1.06
GPHN-214ENST00000556633 BOLA1Q9Y3E2 137 aa8.41□□□□□ -1.06
GPHN-214ENST00000556633 PPP1R15BQ5SWA1 713 aa8.4□□□□□ -1.06
GPHN-214ENST00000556633 SEC24BO95487 1268 aa8.39□□□□□ -1.07
GPHN-214ENST00000556633 TMC2Q8TDI7 906 aa8.39□□□□□ -1.07
GPHN-214ENST00000556633 TMEM121BQ9BXQ6 578 aaPredicted RBP8.39□□□□□ -1.07
GPHN-214ENST00000556633 CAMK2BQ13554 666 aa8.38□□□□□ -1.07
GPHN-214ENST00000556633 DSG2Q14126 1118 aa8.37□□□□□ -1.07
GPHN-214ENST00000556633 SLC39A7Q92504 469 aa8.37□□□□□ -1.07
GPHN-214ENST00000556633 L3MBTL3Q96JM7 780 aaPredicted RBP8.37□□□□□ -1.07
GPHN-214ENST00000556633 COLQQ9Y215 455 aaPredicted RBP8.37□□□□□ -1.07
GPHN-214ENST00000556633 TULP1O00294 542 aaPredicted RBP8.36□□□□□ -1.07
GPHN-214ENST00000556633 SEMA3EO15041 775 aa8.36□□□□□ -1.07
GPHN-214ENST00000556633 ARIH1Q9Y4X5 557 aaPredicted RBP8.36□□□□□ -1.07
GPHN-214ENST00000556633 LMOD2Q6P5Q4 547 aa8.35□□□□□ -1.07
GPHN-214ENST00000556633 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.35□□□□□ -1.07
GPHN-214ENST00000556633 TESPA1A2RU30 521 aaPredicted RBP8.34□□□□□ -1.07
GPHN-214ENST00000556633 C2orf72A6NCS6 295 aa8.34□□□□□ -1.07
GPHN-214ENST00000556633 C7P10643 843 aa8.34□□□□□ -1.07
GPHN-214ENST00000556633 FOXK1P85037 733 aa8.34□□□□□ -1.07
GPHN-214ENST00000556633 SP7Q8TDD2 431 aaPredicted RBP8.33□□□□□ -1.08
GPHN-214ENST00000556633 METRNQ9UJH8 293 aa8.33□□□□□ -1.08
GPHN-214ENST00000556633 POTEIP0CG38 1075 aa8.32□□□□□ -1.08
GPHN-214ENST00000556633 POTEFA5A3E0 1075 aa8.31□□□□□ -1.08
GPHN-214ENST00000556633 KIF3CO14782 793 aa8.31□□□□□ -1.08
GPHN-214ENST00000556633 PLPP6Q8IY26 295 aa8.31□□□□□ -1.08
GPHN-214ENST00000556633 EMILIN3Q9NT22 766 aa8.31□□□□□ -1.08
GPHN-214ENST00000556633 DPYSL4O14531 572 aa8.29□□□□□ -1.08
GPHN-214ENST00000556633 TMEM92Q6UXU6 159 aa8.29□□□□□ -1.08
GPHN-214ENST00000556633 SMYD5Q6GMV2 418 aa8.28□□□□□ -1.08
GPHN-214ENST00000556633 C3orf67Q6ZVT6 689 aa8.26□□□□□ -1.09
GPHN-214ENST00000556633 SPDYE16A6NNV3 312 aaPredicted RBP8.24□□□□□ -1.09
GPHN-214ENST00000556633 MLLT3P42568 568 aaPredicted RBP8.24□□□□□ -1.09
GPHN-214ENST00000556633 PDIA6Q15084 440 aa8.24□□□□□ -1.09
GPHN-214ENST00000556633 MAP3K9P80192 1104 aa8.23□□□□□ -1.09
GPHN-214ENST00000556633 ZC3H15Q8WU90 426 aaKnown RBP8.23□□□□□ -1.09
GPHN-214ENST00000556633 UPF1Q92900 1129 aaKnown RBP eCLIP8.23□□□□□ -1.091e-6■■■■■ 27.9
GPHN-214ENST00000556633 RBM26Q5T8P6 1007 aaKnown RBP8.19□□□□□ -1.1
GPHN-214ENST00000556633 OXER1Q8TDS5 423 aa8.19□□□□□ -1.1
GPHN-214ENST00000556633 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.18□□□□□ -1.1
GPHN-214ENST00000556633 GPIHBP1Q8IV16 184 aa8.16□□□□□ -1.1
GPHN-214ENST00000556633 GRXCR2A6NFK2 248 aa8.15□□□□□ -1.1
GPHN-214ENST00000556633 TBC1D12O60347 775 aa8.15□□□□□ -1.1
GPHN-214ENST00000556633 ZMYND10O75800 440 aa8.14□□□□□ -1.11
GPHN-214ENST00000556633 EVI5O60447 810 aa8.13□□□□□ -1.11
GPHN-214ENST00000556633 PTCD2Q8WV60 388 aaKnown RBP8.13□□□□□ -1.11
GPHN-214ENST00000556633 SLC24A3Q9HC58 644 aa8.13□□□□□ -1.11
GPHN-214ENST00000556633 ZNF316A6NFI3 1004 aaPredicted RBP8.12□□□□□ -1.11
GPHN-214ENST00000556633 SLC34A2O95436 690 aa8.12□□□□□ -1.11
GPHN-214ENST00000556633 DDX12PQ92771 950 aa8.12□□□□□ -1.11
GPHN-214ENST00000556633 PTGER2P43116 358 aa8.11□□□□□ -1.11
GPHN-214ENST00000556633 BARGINQ6ZT62 677 aa8.1□□□□□ -1.11
GPHN-214ENST00000556633 POTEJP0CG39 1038 aa8.09□□□□□ -1.11
GPHN-214ENST00000556633 OSBPP22059 807 aa8.09□□□□□ -1.11
GPHN-214ENST00000556633 NUTM2FA1L443 756 aa8.08□□□□□ -1.12
GPHN-214ENST00000556633 POTEB2H3BUK9 544 aa8.07□□□□□ -1.12
GPHN-214ENST00000556633 KRI1Q8N9T8 703 aaKnown RBP8.07□□□□□ -1.12
GPHN-214ENST00000556633 PCDHGA4Q9Y5G9 962 aa8.07□□□□□ -1.12
GPHN-214ENST00000556633 GPR37O15354 613 aa8.06□□□□□ -1.12
GPHN-214ENST00000556633 BRPF1P55201 1214 aaPredicted RBP8.06□□□□□ -1.12
GPHN-214ENST00000556633 ANO8Q9HCE9 1232 aaPredicted RBP8.06□□□□□ -1.12
GPHN-214ENST00000556633 PRIM1P49642 420 aaKnown RBP8.04□□□□□ -1.12
GPHN-214ENST00000556633 SLAIN1Q8ND83 568 aa8.04□□□□□ -1.12
GPHN-214ENST00000556633 AK7Q96M32 723 aa8.04□□□□□ -1.12
GPHN-214ENST00000556633 SCUBE2Q9NQ36 999 aa8.04□□□□□ -1.12
GPHN-214ENST00000556633 NEUROD2Q15784 382 aa8.03□□□□□ -1.12
GPHN-214ENST00000556633 MAMSTRQ6ZN01 415 aa8.03□□□□□ -1.12
GPHN-214ENST00000556633 DOK7Q18PE1 504 aa8.02□□□□□ -1.13
GPHN-214ENST00000556633 FCHSD2O94868 740 aa8.01□□□□□ -1.13
GPHN-214ENST00000556633 PHF14O94880 888 aa8.01□□□□□ -1.13
GPHN-214ENST00000556633 EPAS1Q99814 870 aa8□□□□□ -1.13
GPHN-214ENST00000556633 KDM4FA0A1W2PPD8 638 aa7.99□□□□□ -1.13
GPHN-214ENST00000556633 RIMBP2O15034 1052 aa7.99□□□□□ -1.13
GPHN-214ENST00000556633 GNPATO15228 680 aa7.99□□□□□ -1.13
GPHN-214ENST00000556633 MAP3K7O43318 606 aa7.99□□□□□ -1.13
GPHN-214ENST00000556633 HOXB3P14651 431 aaPredicted RBP7.99□□□□□ -1.13
GPHN-214ENST00000556633 EN1Q05925 392 aaPredicted RBP7.99□□□□□ -1.13
GPHN-214ENST00000556633 HIC1Q14526 733 aa7.99□□□□□ -1.13
GPHN-214ENST00000556633 TMEM132AQ24JP5 1023 aa7.99□□□□□ -1.13
GPHN-214ENST00000556633 RBM33Q96EV2 1170 aaKnown RBP7.99□□□□□ -1.13
GPHN-214ENST00000556633 PCDHGA10Q9Y5H3 936 aa7.99□□□□□ -1.13
GPHN-214ENST00000556633 PTGDRQ13258 359 aa7.98□□□□□ -1.13
GPHN-214ENST00000556633 ARSIQ5FYB1 569 aa7.98□□□□□ -1.13
GPHN-214ENST00000556633 KHSRPQ92945 711 aaKnown RBP eCLIP7.98□□□□□ -1.13
GPHN-214ENST00000556633 MINK1Q8N4C8 1332 aaPredicted RBP7.98□□□□□ -1.13
GPHN-214ENST00000556633 NUDT7P0C024 238 aa7.97□□□□□ -1.13
GPHN-214ENST00000556633 MAP2K5Q13163 448 aa7.97□□□□□ -1.13
GPHN-214ENST00000556633 TYW1BQ6NUM6 668 aa7.97□□□□□ -1.13
GPHN-214ENST00000556633 JPH4Q96JJ6 628 aa7.97□□□□□ -1.13
GPHN-214ENST00000556633 CDHR5Q9HBB8 845 aa7.97□□□□□ -1.13
GPHN-214ENST00000556633 TRIM66O15016 1216 aa7.96□□□□□ -1.14
GPHN-214ENST00000556633 FECHP22830 423 aa7.96□□□□□ -1.14
GPHN-214ENST00000556633 ZNF710Q8N1W2 664 aa7.96□□□□□ -1.14
GPHN-214ENST00000556633 FBXW7Q969H0 707 aa7.96□□□□□ -1.14
GPHN-214ENST00000556633 CCDC102AQ96A19 550 aa7.96□□□□□ -1.14
GPHN-214ENST00000556633 ZSWIM6Q9HCJ5 1215 aa7.96□□□□□ -1.14
GPHN-214ENST00000556633 FOSBP53539 338 aa7.95□□□□□ -1.14
GPHN-214ENST00000556633 TSR1Q2NL82 804 aaKnown RBP7.95□□□□□ -1.14
GPHN-214ENST00000556633 ZNF454Q8N9F8 522 aa7.95□□□□□ -1.14
GPHN-214ENST00000556633 IRF6O14896 467 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms