RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
SPTB-208ENST00000556626 CSPP1Q1MSJ5 1256 aa13.66□□□□□ -0.22
SPTB-208ENST00000556626 TSHZ2Q9NRE2 1034 aa13.65□□□□□ -0.22
SPTB-208ENST00000556626 A0A0U1RQG5 324 aaPredicted RBP13.64□□□□□ -0.23
SPTB-208ENST00000556626 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
SPTB-208ENST00000556626 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
SPTB-208ENST00000556626 KTN1Q86UP2 1357 aaKnown RBP13.63□□□□□ -0.23
SPTB-208ENST00000556626 RCAN3Q9UKA8 241 aa13.63□□□□□ -0.23
SPTB-208ENST00000556626 CLSTN1O94985 981 aa13.62□□□□□ -0.23
SPTB-208ENST00000556626 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
SPTB-208ENST00000556626 CALD1Q05682 793 aaKnown RBP13.62□□□□□ -0.23
SPTB-208ENST00000556626 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
SPTB-208ENST00000556626 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
SPTB-208ENST00000556626 CCNB3Q8WWL7 1395 aa13.62□□□□□ -0.23
SPTB-208ENST00000556626 CCDC34Q96HJ3 373 aa13.61□□□□□ -0.23
SPTB-208ENST00000556626 TNIKQ9UKE5 1360 aa13.61□□□□□ -0.23
SPTB-208ENST00000556626 U2SURPO15042 1029 aaKnown RBP13.61□□□□□ -0.23
SPTB-208ENST00000556626 RWDD1Q9H446 243 aaPredicted RBP13.6□□□□□ -0.23
SPTB-208ENST00000556626 TMF1P82094 1093 aa13.6□□□□□ -0.23
SPTB-208ENST00000556626 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
SPTB-208ENST00000556626 GSE1Q14687 1217 aa13.59□□□□□ -0.23
SPTB-208ENST00000556626 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
SPTB-208ENST00000556626 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.23
SPTB-208ENST00000556626 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
SPTB-208ENST00000556626 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
SPTB-208ENST00000556626 CALRP27797 417 aaKnown RBP13.56□□□□□ -0.24
SPTB-208ENST00000556626 ZNF771Q7L3S4 317 aaPredicted RBP13.56□□□□□ -0.24
SPTB-208ENST00000556626 NPHP1O15259 732 aa13.56□□□□□ -0.24
SPTB-208ENST00000556626 SENP3Q9H4L4 574 aaPredicted RBP13.56□□□□□ -0.24
SPTB-208ENST00000556626 SIN3AQ96ST3 1273 aa13.56□□□□□ -0.24
SPTB-208ENST00000556626 GPS2Q13227 327 aa13.55□□□□□ -0.24
SPTB-208ENST00000556626 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
SPTB-208ENST00000556626 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
SPTB-208ENST00000556626 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
SPTB-208ENST00000556626 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
SPTB-208ENST00000556626 ST18O60284 1047 aa13.54□□□□□ -0.24
SPTB-208ENST00000556626 MFAP1P55081 439 aaKnown RBP13.54□□□□□ -0.24
SPTB-208ENST00000556626 SKOR2Q2VWA4 1001 aaPredicted RBP13.54□□□□□ -0.24
SPTB-208ENST00000556626 GPATCH3Q96I76 525 aa13.54□□□□□ -0.24
SPTB-208ENST00000556626 SETD5Q9C0A6 1442 aa13.53□□□□□ -0.24
SPTB-208ENST00000556626 POGKQ9P215 609 aa13.53□□□□□ -0.24
SPTB-208ENST00000556626 TEX35Q5T0J7 233 aa13.52□□□□□ -0.24
SPTB-208ENST00000556626 TPM3P06753 285 aa13.52□□□□□ -0.25
SPTB-208ENST00000556626 RALBP1Q15311 655 aa13.52□□□□□ -0.25
SPTB-208ENST00000556626 KIF16BQ96L93 1317 aa13.51□□□□□ -0.25
SPTB-208ENST00000556626 CHMP7Q8WUX9 453 aaPredicted RBP13.51□□□□□ -0.25
SPTB-208ENST00000556626 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
SPTB-208ENST00000556626 PLEKHD1A6NEE1 506 aa13.51□□□□□ -0.25
SPTB-208ENST00000556626 PHLDB1Q86UU1 1377 aa13.5□□□□□ -0.25
SPTB-208ENST00000556626 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
SPTB-208ENST00000556626 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
SPTB-208ENST00000556626 CCDC70Q6NSX1 233 aa13.49□□□□□ -0.25
SPTB-208ENST00000556626 APBB1O00213 710 aa13.48□□□□□ -0.25
SPTB-208ENST00000556626 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
SPTB-208ENST00000556626 MORC1Q86VD1 984 aa13.48□□□□□ -0.25
SPTB-208ENST00000556626 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.48□□□□□ -0.25
SPTB-208ENST00000556626 NOM1Q5C9Z4 860 aaKnown RBP13.48□□□□□ -0.25
SPTB-208ENST00000556626 FANCIQ9NVI1 1328 aa13.47□□□□□ -0.25
SPTB-208ENST00000556626 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
SPTB-208ENST00000556626 GOLGA6L19H0YKK7 550 aa13.47□□□□□ -0.25
SPTB-208ENST00000556626 ATP6V1DQ9Y5K8 247 aa13.47□□□□□ -0.25
SPTB-208ENST00000556626 ROCK2O75116 1388 aaKnown RBP13.47□□□□□ -0.25
SPTB-208ENST00000556626 KANK1Q14678 1352 aa13.47□□□□□ -0.25
SPTB-208ENST00000556626 TRIM6-TRIM34B2RNG4 842 aa13.47□□□□□ -0.25
SPTB-208ENST00000556626 KIF3AQ9Y496 699 aa13.46□□□□□ -0.25
SPTB-208ENST00000556626 MTERF4Q7Z6M4 381 aaKnown RBP13.46□□□□□ -0.26
SPTB-208ENST00000556626 EIF3AQ14152 1382 aaKnown RBP13.45□□□□□ -0.26
SPTB-208ENST00000556626 TSR1Q2NL82 804 aaKnown RBP13.45□□□□□ -0.26
SPTB-208ENST00000556626 FAM13BQ9NYF5 915 aa13.44□□□□□ -0.26
SPTB-208ENST00000556626 HMMRO75330 724 aa13.44□□□□□ -0.26
SPTB-208ENST00000556626 FAM161AQ3B820 660 aa13.43□□□□□ -0.26
SPTB-208ENST00000556626 DDX49Q9Y6V7 483 aaKnown RBP13.43□□□□□ -0.26
SPTB-208ENST00000556626 CENPQQ7L2Z9 268 aaPredicted RBP13.43□□□□□ -0.26
SPTB-208ENST00000556626 UBE2Q2Q8WVN8 375 aa13.43□□□□□ -0.26
SPTB-208ENST00000556626 CCAR2Q8N163 923 aaKnown RBP13.43□□□□□ -0.26
SPTB-208ENST00000556626 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
SPTB-208ENST00000556626 ANO8Q9HCE9 1232 aaPredicted RBP13.42□□□□□ -0.26
SPTB-208ENST00000556626 ISY1Q9ULR0 285 aaKnown RBP13.42□□□□□ -0.26
SPTB-208ENST00000556626 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
SPTB-208ENST00000556626 KCNH8Q96L42 1107 aa13.42□□□□□ -0.26
SPTB-208ENST00000556626 TPM1P09493 284 aa13.41□□□□□ -0.26
SPTB-208ENST00000556626 CREBRFQ8IUR6 639 aa13.41□□□□□ -0.26
SPTB-208ENST00000556626 SMC4Q9NTJ3 1288 aa13.41□□□□□ -0.26
SPTB-208ENST00000556626 CEP89Q96ST8 783 aa13.41□□□□□ -0.26
SPTB-208ENST00000556626 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
SPTB-208ENST00000556626 PDE3BQ13370 1112 aa13.41□□□□□ -0.26
SPTB-208ENST00000556626 FAM43AQ8N2R8 423 aa13.4□□□□□ -0.26
SPTB-208ENST00000556626 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
SPTB-208ENST00000556626 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
SPTB-208ENST00000556626 SRPK2P78362 688 aaKnown RBP13.4□□□□□ -0.26
SPTB-208ENST00000556626 MAP7D2Q96T17 732 aa13.4□□□□□ -0.26
SPTB-208ENST00000556626 CHMP4AQ9BY43 222 aa13.4□□□□□ -0.26
SPTB-208ENST00000556626 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.27
SPTB-208ENST00000556626 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
SPTB-208ENST00000556626 SPAG9O60271 1321 aaKnown RBP13.39□□□□□ -0.27
SPTB-208ENST00000556626 BECN2A8MW95 431 aa13.38□□□□□ -0.27
SPTB-208ENST00000556626 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
SPTB-208ENST00000556626 H3BQV1 296 aa13.38□□□□□ -0.27
SPTB-208ENST00000556626 IFFO2Q5TF58 517 aa13.38□□□□□ -0.27
SPTB-208ENST00000556626 HDAC5Q9UQL6 1122 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms