RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 HECW1Q76N89 1606 aa19.77■□□□□ 0.76
ACTN1-221ENST00000556571 ATP1B4Q9UN42 357 aaPredicted RBP19.77■□□□□ 0.76
ACTN1-221ENST00000556571 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
ACTN1-221ENST00000556571 UBTFP17480 764 aaKnown RBP19.75■□□□□ 0.75
ACTN1-221ENST00000556571 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
ACTN1-221ENST00000556571 ATP10AO60312 1499 aa19.74■□□□□ 0.75
ACTN1-221ENST00000556571 CERKQ8TCT0 537 aa19.72■□□□□ 0.75
ACTN1-221ENST00000556571 SIGLEC1Q9BZZ2 1709 aa19.72■□□□□ 0.75
ACTN1-221ENST00000556571 C9orf84Q5VXU9 1444 aa19.71■□□□□ 0.75
ACTN1-221ENST00000556571 ARHGEF12Q9NZN5 1544 aa19.68■□□□□ 0.74
ACTN1-221ENST00000556571 EHMT2Q96KQ7 1210 aa19.68■□□□□ 0.74
ACTN1-221ENST00000556571 FER1L4A9Z1Z3 1794 aa19.67■□□□□ 0.74
ACTN1-221ENST00000556571 CEBPAP49715 358 aaPredicted RBP19.66■□□□□ 0.74
ACTN1-221ENST00000556571 AFAP1Q8N556 730 aa19.66■□□□□ 0.74
ACTN1-221ENST00000556571 ZNF518AQ6AHZ1 1483 aa19.66■□□□□ 0.74
ACTN1-221ENST00000556571 ARHGAP35Q9NRY4 1499 aa19.66■□□□□ 0.74
ACTN1-221ENST00000556571 TROQ12816 1431 aaPredicted RBP19.65■□□□□ 0.74
ACTN1-221ENST00000556571 MYT1LQ9UL68 1186 aa19.64■□□□□ 0.73
ACTN1-221ENST00000556571 DMRT2Q9Y5R5 561 aa19.64■□□□□ 0.73
ACTN1-221ENST00000556571 MYO5CQ9NQX4 1742 aa19.63■□□□□ 0.73
ACTN1-221ENST00000556571 CLIP1P30622 1438 aa19.63■□□□□ 0.73
ACTN1-221ENST00000556571 ARHGAP5Q13017 1502 aa19.61■□□□□ 0.73
ACTN1-221ENST00000556571 KIF14Q15058 1648 aa19.61■□□□□ 0.73
ACTN1-221ENST00000556571 KDM5CP41229 1560 aa19.59■□□□□ 0.73
ACTN1-221ENST00000556571 PREX1Q8TCU6 1659 aa19.58■□□□□ 0.72
ACTN1-221ENST00000556571 UHRF1BP1Q6BDS2 1440 aa19.58■□□□□ 0.72
ACTN1-221ENST00000556571 ESF1Q9H501 851 aaKnown RBP19.56■□□□□ 0.72
ACTN1-221ENST00000556571 SETD1BQ9UPS6 1966 aaKnown RBP19.55■□□□□ 0.72
ACTN1-221ENST00000556571 MLH3Q9UHC1 1453 aa19.55■□□□□ 0.72
ACTN1-221ENST00000556571 REREQ9P2R6 1566 aa19.53■□□□□ 0.72
ACTN1-221ENST00000556571 DIP2CQ9Y2E4 1556 aa19.53■□□□□ 0.72
ACTN1-221ENST00000556571 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
ACTN1-221ENST00000556571 TRAPPC8Q9Y2L5 1435 aa19.51■□□□□ 0.71
ACTN1-221ENST00000556571 AGLP35573 1532 aa19.5■□□□□ 0.71
ACTN1-221ENST00000556571 CASKIN1Q8WXD9 1431 aa19.49■□□□□ 0.71
ACTN1-221ENST00000556571 CCDC18Q5T9S5 1454 aa19.48■□□□□ 0.71
ACTN1-221ENST00000556571 STRCQ7RTU9 1775 aa19.48■□□□□ 0.71
ACTN1-221ENST00000556571 PTPRTO14522 1441 aa19.48■□□□□ 0.71
ACTN1-221ENST00000556571 CDC42BPBQ9Y5S2 1711 aa19.48■□□□□ 0.71
ACTN1-221ENST00000556571 ABCA6Q8N139 1617 aa19.47■□□□□ 0.71
ACTN1-221ENST00000556571 ABCC1P33527 1531 aa19.46■□□□□ 0.71
ACTN1-221ENST00000556571 CNTLNQ9NXG0 1405 aa19.46■□□□□ 0.71
ACTN1-221ENST00000556571 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
ACTN1-221ENST00000556571 PREX2Q70Z35 1606 aa19.44■□□□□ 0.7
ACTN1-221ENST00000556571 C3P01024 1663 aa19.43■□□□□ 0.7
ACTN1-221ENST00000556571 ZNF777Q9ULD5 760 aaPredicted RBP19.42■□□□□ 0.7
ACTN1-221ENST00000556571 DISP3Q9P2K9 1392 aa19.42■□□□□ 0.7
ACTN1-221ENST00000556571 ITSN2Q9NZM3 1697 aa19.4■□□□□ 0.7
ACTN1-221ENST00000556571 SPAG9O60271 1321 aaKnown RBP19.39■□□□□ 0.69
ACTN1-221ENST00000556571 KIDINS220Q9ULH0 1771 aa19.39■□□□□ 0.69
ACTN1-221ENST00000556571 NCOA1Q15788 1441 aa19.38■□□□□ 0.69
ACTN1-221ENST00000556571 NPATQ14207 1427 aa19.37■□□□□ 0.69
ACTN1-221ENST00000556571 ZMYM3Q14202 1370 aa19.37■□□□□ 0.69
ACTN1-221ENST00000556571 HNRNPMP52272 730 aaKnown RBP eCLIP19.37■□□□□ 0.691e-6■■■■■ 27.2
ACTN1-221ENST00000556571 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
ACTN1-221ENST00000556571 SAMD9LQ8IVG5 1584 aa19.36■□□□□ 0.69
ACTN1-221ENST00000556571 GPATCH8Q9UKJ3 1502 aaKnown RBP19.35■□□□□ 0.69
ACTN1-221ENST00000556571 ILDR2Q71H61 639 aa19.35■□□□□ 0.69
ACTN1-221ENST00000556571 CDC42BPAQ5VT25 1732 aa19.34■□□□□ 0.69
ACTN1-221ENST00000556571 LTBP4Q8N2S1 1624 aa19.34■□□□□ 0.69
ACTN1-221ENST00000556571 CFDP1Q9UEE9 299 aaPredicted RBP19.34■□□□□ 0.69
ACTN1-221ENST00000556571 IQSEC2Q5JU85 1478 aa19.34■□□□□ 0.69
ACTN1-221ENST00000556571 KIAA1107Q9UPP5 1409 aa19.34■□□□□ 0.69
ACTN1-221ENST00000556571 SOCS7O14512 581 aa19.32■□□□□ 0.68
ACTN1-221ENST00000556571 SYCP2Q9BX26 1530 aa19.31■□□□□ 0.68
ACTN1-221ENST00000556571 PLEKHH2Q8IVE3 1493 aa19.31■□□□□ 0.68
ACTN1-221ENST00000556571 CCNB3Q8WWL7 1395 aa19.3■□□□□ 0.68
ACTN1-221ENST00000556571 CAMSAP1Q5T5Y3 1602 aa19.29■□□□□ 0.68
ACTN1-221ENST00000556571 NCKAP5LQ9HCH0 1330 aa19.29■□□□□ 0.68
ACTN1-221ENST00000556571 PPP6R1Q9UPN7 881 aa19.29■□□□□ 0.68
ACTN1-221ENST00000556571 MROH2AA6NES4 1674 aa19.29■□□□□ 0.68
ACTN1-221ENST00000556571 PKD2Q13563 968 aa19.28■□□□□ 0.68
ACTN1-221ENST00000556571 GGT6Q6P531 493 aa19.28■□□□□ 0.68
ACTN1-221ENST00000556571 A2MP01023 1474 aa19.28■□□□□ 0.68
ACTN1-221ENST00000556571 ATP7AQ04656 1500 aa19.27■□□□□ 0.68
ACTN1-221ENST00000556571 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
ACTN1-221ENST00000556571 PTPRKQ15262 1439 aa19.25■□□□□ 0.67
ACTN1-221ENST00000556571 ZNF335Q9H4Z2 1342 aaPredicted RBP19.25■□□□□ 0.67
ACTN1-221ENST00000556571 MTUS2Q5JR59 1369 aa19.24■□□□□ 0.67
ACTN1-221ENST00000556571 PLXNC1O60486 1568 aa19.23■□□□□ 0.67
ACTN1-221ENST00000556571 PLA2R1Q13018 1463 aa19.23■□□□□ 0.67
ACTN1-221ENST00000556571 INO80Q9ULG1 1556 aaPredicted RBP19.22■□□□□ 0.67
ACTN1-221ENST00000556571 UBAP1LF5GYI3 381 aa19.21■□□□□ 0.67
ACTN1-221ENST00000556571 SPATA31D1Q6ZQQ2 1576 aa19.21■□□□□ 0.67
ACTN1-221ENST00000556571 CLTCQ00610 1675 aaKnown RBP19.2■□□□□ 0.66
ACTN1-221ENST00000556571 TCOF1Q13428 1488 aaKnown RBP19.2■□□□□ 0.66
ACTN1-221ENST00000556571 ZNF644Q9H582 1327 aaPredicted RBP19.2■□□□□ 0.66
ACTN1-221ENST00000556571 CEP170BQ9Y4F5 1589 aaPredicted RBP19.18■□□□□ 0.66
ACTN1-221ENST00000556571 MYO3AQ8NEV4 1616 aa19.17■□□□□ 0.66
ACTN1-221ENST00000556571 ZNF142P52746 1687 aaPredicted RBP19.17■□□□□ 0.66
ACTN1-221ENST00000556571 RTEL1-TNFRSF6BF6WH68 1400 aa19.17■□□□□ 0.66
ACTN1-221ENST00000556571 DHX29Q7Z478 1369 aaKnown RBP19.16■□□□□ 0.66
ACTN1-221ENST00000556571 MBD5Q9P267 1494 aa19.16■□□□□ 0.66
ACTN1-221ENST00000556571 A2ML1A8K2U0 1454 aa19.14■□□□□ 0.65
ACTN1-221ENST00000556571 ADGBQ8N7X0 1667 aa19.14■□□□□ 0.65
ACTN1-221ENST00000556571 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
ACTN1-221ENST00000556571 CEP162Q5TB80 1403 aa19.11■□□□□ 0.65
ACTN1-221ENST00000556571 KIF3BO15066 747 aa19.11■□□□□ 0.65
ACTN1-221ENST00000556571 RSPH4AQ5TD94 716 aa19.11■□□□□ 0.65
ACTN1-221ENST00000556571 FBXO31Q5XUX0 539 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms