RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 ATP10BO94823 1461 aa14.24□□□□□ -0.13
HNRNPC-223ENST00000556142 FAM50AQ14320 339 aaKnown RBP14.22□□□□□ -0.13
HNRNPC-223ENST00000556142 TCOF1Q13428 1488 aaKnown RBP14.22□□□□□ -0.13
HNRNPC-223ENST00000556142 TROQ12816 1431 aaPredicted RBP14.22□□□□□ -0.13
HNRNPC-223ENST00000556142 CDK11AQ9UQ88 783 aaPredicted RBP14.22□□□□□ -0.13
HNRNPC-223ENST00000556142 COL17A1Q9UMD9 1497 aaPredicted RBP14.21□□□□□ -0.14
HNRNPC-223ENST00000556142 UACAQ9BZF9 1416 aa14.2□□□□□ -0.14
HNRNPC-223ENST00000556142 MIA2Q96PC5 1412 aa14.2□□□□□ -0.14
HNRNPC-223ENST00000556142 ITGAEP38570 1179 aa14.19□□□□□ -0.14
HNRNPC-223ENST00000556142 PTPRKQ15262 1439 aa14.18□□□□□ -0.14
HNRNPC-223ENST00000556142 PTPN23Q9H3S7 1636 aa14.18□□□□□ -0.14
HNRNPC-223ENST00000556142 UHRF1BP1LA0JNW5 1464 aa14.17□□□□□ -0.14
HNRNPC-223ENST00000556142 TEX14Q8IWB6 1497 aa14.17□□□□□ -0.14
HNRNPC-223ENST00000556142 DHX57Q6P158 1386 aaKnown RBP14.16□□□□□ -0.14
HNRNPC-223ENST00000556142 SETD5Q9C0A6 1442 aa14.15□□□□□ -0.14
HNRNPC-223ENST00000556142 MAP3K4Q9Y6R4 1608 aa14.15□□□□□ -0.14
HNRNPC-223ENST00000556142 PLEKHD1A6NEE1 506 aa14.14□□□□□ -0.15
HNRNPC-223ENST00000556142 RAB3GAP2Q9H2M9 1393 aa14.14□□□□□ -0.15
HNRNPC-223ENST00000556142 KIF14Q15058 1648 aa14.13□□□□□ -0.15
HNRNPC-223ENST00000556142 GPATCH8Q9UKJ3 1502 aaKnown RBP14.13□□□□□ -0.15
HNRNPC-223ENST00000556142 KDM5BQ9UGL1 1544 aa14.11□□□□□ -0.15
HNRNPC-223ENST00000556142 FBXO41Q8TF61 875 aa14.11□□□□□ -0.15
HNRNPC-223ENST00000556142 CLSPNQ9HAW4 1339 aa14.1□□□□□ -0.15
HNRNPC-223ENST00000556142 HFM1A2PYH4 1435 aa14.08□□□□□ -0.16
HNRNPC-223ENST00000556142 ZCCHC11Q5TAX3 1644 aaKnown RBP14.07□□□□□ -0.16
HNRNPC-223ENST00000556142 ZNF644Q9H582 1327 aaPredicted RBP14.07□□□□□ -0.16
HNRNPC-223ENST00000556142 NAIPQ13075 1403 aa14.07□□□□□ -0.16
HNRNPC-223ENST00000556142 ABCC5O15440 1437 aa14.06□□□□□ -0.16
HNRNPC-223ENST00000556142 CFDP1Q9UEE9 299 aaPredicted RBP14.05□□□□□ -0.16
HNRNPC-223ENST00000556142 AKNAQ7Z591 1439 aa14.04□□□□□ -0.16
HNRNPC-223ENST00000556142 ITSN2Q9NZM3 1697 aa14.04□□□□□ -0.16
HNRNPC-223ENST00000556142 DAPK1P53355 1430 aa14.04□□□□□ -0.16
HNRNPC-223ENST00000556142 WDR7Q9Y4E6 1490 aa14.04□□□□□ -0.16
HNRNPC-223ENST00000556142 CAMSAP2Q08AD1 1489 aa14.03□□□□□ -0.16
HNRNPC-223ENST00000556142 CDC42BPAQ5VT25 1732 aa14.03□□□□□ -0.16
HNRNPC-223ENST00000556142 DNMT1P26358 1616 aaKnown RBP14.02□□□□□ -0.16
HNRNPC-223ENST00000556142 ROCK1Q13464 1354 aa14.01□□□□□ -0.17
HNRNPC-223ENST00000556142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14□□□□□ -0.171e-13■■■□□ 15.2
HNRNPC-223ENST00000556142 CD109Q6YHK3 1445 aa14□□□□□ -0.17
HNRNPC-223ENST00000556142 CHIC2Q9UKJ5 165 aa13.99□□□□□ -0.17
HNRNPC-223ENST00000556142 RRP7BPQ9NSQ0 103 aa13.98□□□□□ -0.17
HNRNPC-223ENST00000556142 GCC2Q8IWJ2 1684 aa13.97□□□□□ -0.17
HNRNPC-223ENST00000556142 KCNH8Q96L42 1107 aa13.96□□□□□ -0.17
HNRNPC-223ENST00000556142 PREX2Q70Z35 1606 aa13.96□□□□□ -0.17
HNRNPC-223ENST00000556142 TTC37Q6PGP7 1564 aa13.96□□□□□ -0.17
HNRNPC-223ENST00000556142 CDC42BPBQ9Y5S2 1711 aa13.95□□□□□ -0.18
HNRNPC-223ENST00000556142 ADGRL2O95490 1459 aa13.95□□□□□ -0.18
HNRNPC-223ENST00000556142 MBD5Q9P267 1494 aa13.95□□□□□ -0.18
HNRNPC-223ENST00000556142 ZNF777Q9ULD5 760 aaPredicted RBP13.95□□□□□ -0.18
HNRNPC-223ENST00000556142 SAMD9LQ8IVG5 1584 aa13.93□□□□□ -0.18
HNRNPC-223ENST00000556142 PTPRMP28827 1452 aa13.93□□□□□ -0.18
HNRNPC-223ENST00000556142 PLCH2O75038 1416 aa13.93□□□□□ -0.18
HNRNPC-223ENST00000556142 NCOA1Q15788 1441 aa13.93□□□□□ -0.18
HNRNPC-223ENST00000556142 ARHGEF5Q12774 1597 aa13.93□□□□□ -0.18
HNRNPC-223ENST00000556142 CROCC2H7BZ55 1655 aa13.92□□□□□ -0.18
HNRNPC-223ENST00000556142 SHANK2Q9UPX8 1470 aa13.92□□□□□ -0.18
HNRNPC-223ENST00000556142 ARAP3Q8WWN8 1544 aa13.91□□□□□ -0.18
HNRNPC-223ENST00000556142 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.185e-7■■■■□ 19.9
HNRNPC-223ENST00000556142 RSPH4AQ5TD94 716 aa13.9□□□□□ -0.18
HNRNPC-223ENST00000556142 DENND4BO75064 1496 aaPredicted RBP13.9□□□□□ -0.18
HNRNPC-223ENST00000556142 ADAMTSL3P82987 1691 aa13.9□□□□□ -0.19
HNRNPC-223ENST00000556142 KIAA1107Q9UPP5 1409 aa13.89□□□□□ -0.19
HNRNPC-223ENST00000556142 ACIN1Q9UKV3 1341 aaKnown RBP13.88□□□□□ -0.19
HNRNPC-223ENST00000556142 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
HNRNPC-223ENST00000556142 MYO5CQ9NQX4 1742 aa13.88□□□□□ -0.19
HNRNPC-223ENST00000556142 ARHGAP5Q13017 1502 aa13.87□□□□□ -0.19
HNRNPC-223ENST00000556142 ANKRD30AQ9BXX3 1397 aa13.87□□□□□ -0.19
HNRNPC-223ENST00000556142 C9orf84Q5VXU9 1444 aa13.87□□□□□ -0.19
HNRNPC-223ENST00000556142 CCDC141Q6ZP82 1450 aa13.86□□□□□ -0.19
HNRNPC-223ENST00000556142 LMTK3Q96Q04 1460 aa13.86□□□□□ -0.19
HNRNPC-223ENST00000556142 SIN3AQ96ST3 1273 aa13.86□□□□□ -0.19
HNRNPC-223ENST00000556142 PLEKHH2Q8IVE3 1493 aa13.86□□□□□ -0.19
HNRNPC-223ENST00000556142 ARHGEF12Q9NZN5 1544 aa13.85□□□□□ -0.19
HNRNPC-223ENST00000556142 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
HNRNPC-223ENST00000556142 ABCA9Q8IUA7 1624 aa13.85□□□□□ -0.19
HNRNPC-223ENST00000556142 TSPY4P0CV99 314 aa13.84□□□□□ -0.19
HNRNPC-223ENST00000556142 TSPY10P0CW01 314 aa13.84□□□□□ -0.19
HNRNPC-223ENST00000556142 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
HNRNPC-223ENST00000556142 EFCAB2Q5VUJ9 269 aa13.84□□□□□ -0.19
HNRNPC-223ENST00000556142 SYCP2Q9BX26 1530 aa13.84□□□□□ -0.19
HNRNPC-223ENST00000556142 MAST1Q9Y2H9 1570 aa13.84□□□□□ -0.19
HNRNPC-223ENST00000556142 MPHOSPH9Q99550 1183 aa13.83□□□□□ -0.2
HNRNPC-223ENST00000556142 TIMELESSQ9UNS1 1208 aa13.83□□□□□ -0.2
HNRNPC-223ENST00000556142 BCORL1Q5H9F3 1711 aa13.82□□□□□ -0.2
HNRNPC-223ENST00000556142 MADDQ8WXG6 1647 aa13.82□□□□□ -0.2
HNRNPC-223ENST00000556142 ARID4BQ4LE39 1312 aaPredicted RBP13.82□□□□□ -0.2
HNRNPC-223ENST00000556142 RAPGEF3O95398 923 aa13.82□□□□□ -0.2
HNRNPC-223ENST00000556142 TRIM52Q96A61 297 aa13.82□□□□□ -0.2
HNRNPC-223ENST00000556142 ABCC1P33527 1531 aa13.81□□□□□ -0.2
HNRNPC-223ENST00000556142 ANKRD50Q9ULJ7 1429 aa13.81□□□□□ -0.2
HNRNPC-223ENST00000556142 DMRT2Q9Y5R5 561 aa13.8□□□□□ -0.2
HNRNPC-223ENST00000556142 PZPP20742 1482 aa13.79□□□□□ -0.2
HNRNPC-223ENST00000556142 TRAPPC8Q9Y2L5 1435 aa13.78□□□□□ -0.2
HNRNPC-223ENST00000556142 KIF15Q9NS87 1388 aa13.78□□□□□ -0.2
HNRNPC-223ENST00000556142 NEO1Q92859 1461 aa13.78□□□□□ -0.2
HNRNPC-223ENST00000556142 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-223ENST00000556142 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
HNRNPC-223ENST00000556142 HSPA2P54652 639 aa13.76□□□□□ -0.21
HNRNPC-223ENST00000556142 CERKQ8TCT0 537 aa13.76□□□□□ -0.21
HNRNPC-223ENST00000556142 FANCAO15360 1455 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms