RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 ARHGEF12Q9NZN5 1544 aa22.97■■□□□ 1.27
ABCD4-224ENST00000556119 HECW1Q76N89 1606 aa22.97■■□□□ 1.27
ABCD4-224ENST00000556119 SETD1BQ9UPS6 1966 aaKnown RBP22.96■■□□□ 1.27
ABCD4-224ENST00000556119 NUP153P49790 1475 aaKnown RBP22.96■■□□□ 1.27
ABCD4-224ENST00000556119 SAMD9Q5K651 1589 aa22.94■■□□□ 1.26
ABCD4-224ENST00000556119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.92■■□□□ 1.26
ABCD4-224ENST00000556119 LTBP4Q8N2S1 1624 aa22.91■■□□□ 1.26
ABCD4-224ENST00000556119 PLEKHD1A6NEE1 506 aa22.9■■□□□ 1.26
ABCD4-224ENST00000556119 PTPRTO14522 1441 aa22.9■■□□□ 1.26
ABCD4-224ENST00000556119 ATP10AO60312 1499 aa22.88■■□□□ 1.25
ABCD4-224ENST00000556119 UHRF1BP1Q6BDS2 1440 aa22.88■■□□□ 1.25
ABCD4-224ENST00000556119 SCAPERQ9BY12 1400 aa22.84■■□□□ 1.25
ABCD4-224ENST00000556119 IQSEC2Q5JU85 1478 aa22.84■■□□□ 1.25
ABCD4-224ENST00000556119 C9orf84Q5VXU9 1444 aa22.82■■□□□ 1.24
ABCD4-224ENST00000556119 C3P01024 1663 aa22.76■■□□□ 1.23
ABCD4-224ENST00000556119 PLCH2O75038 1416 aa22.75■■□□□ 1.23
ABCD4-224ENST00000556119 NCOA1Q15788 1441 aa22.7■■□□□ 1.22
ABCD4-224ENST00000556119 UBAP1LF5GYI3 381 aa22.69■■□□□ 1.22
ABCD4-224ENST00000556119 RANGAP1P46060 587 aaPredicted RBP22.69■■□□□ 1.22
ABCD4-224ENST00000556119 TRAPPC8Q9Y2L5 1435 aa22.66■■□□□ 1.22
ABCD4-224ENST00000556119 EFCAB2Q5VUJ9 269 aa22.66■■□□□ 1.22
ABCD4-224ENST00000556119 AFAP1Q8N556 730 aa22.65■■□□□ 1.22
ABCD4-224ENST00000556119 CDK13Q14004 1512 aaKnown RBP22.65■■□□□ 1.22
ABCD4-224ENST00000556119 MYO5CQ9NQX4 1742 aa22.65■■□□□ 1.22
ABCD4-224ENST00000556119 DIP2CQ9Y2E4 1556 aa22.63■■□□□ 1.21
ABCD4-224ENST00000556119 ZNF518AQ6AHZ1 1483 aa22.63■■□□□ 1.21
ABCD4-224ENST00000556119 KDM5CP41229 1560 aa22.63■■□□□ 1.21
ABCD4-224ENST00000556119 ZNF335Q9H4Z2 1342 aaPredicted RBP22.62■■□□□ 1.21
ABCD4-224ENST00000556119 REREQ9P2R6 1566 aa22.62■■□□□ 1.21
ABCD4-224ENST00000556119 CAMSAP1Q5T5Y3 1602 aa22.61■■□□□ 1.21
ABCD4-224ENST00000556119 CSRNP3Q8WYN3 585 aa22.59■■□□□ 1.21
ABCD4-224ENST00000556119 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
ABCD4-224ENST00000556119 ABCA6Q8N139 1617 aa22.57■■□□□ 1.2
ABCD4-224ENST00000556119 ESF1Q9H501 851 aaKnown RBP22.57■■□□□ 1.2
ABCD4-224ENST00000556119 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
ABCD4-224ENST00000556119 MED1Q15648 1581 aaPredicted RBP22.57■■□□□ 1.2
ABCD4-224ENST00000556119 AGLP35573 1532 aa22.56■■□□□ 1.2
ABCD4-224ENST00000556119 HSPA1LP34931 641 aa22.53■■□□□ 1.2
ABCD4-224ENST00000556119 KIF14Q15058 1648 aa22.52■■□□□ 1.2
ABCD4-224ENST00000556119 MLH3Q9UHC1 1453 aa22.52■■□□□ 1.2
ABCD4-224ENST00000556119 ARHGAP5Q13017 1502 aa22.5■■□□□ 1.19
ABCD4-224ENST00000556119 CNTLNQ9NXG0 1405 aa22.49■■□□□ 1.19
ABCD4-224ENST00000556119 NPATQ14207 1427 aa22.48■■□□□ 1.19
ABCD4-224ENST00000556119 MROH2AA6NES4 1674 aa22.46■■□□□ 1.19
ABCD4-224ENST00000556119 SUPT6HQ7KZ85 1726 aaKnown RBP22.45■■□□□ 1.19
ABCD4-224ENST00000556119 CDC42BPBQ9Y5S2 1711 aa22.45■■□□□ 1.19
ABCD4-224ENST00000556119 PKD2Q13563 968 aa22.45■■□□□ 1.18
ABCD4-224ENST00000556119 KIDINS220Q9ULH0 1771 aa22.44■■□□□ 1.18
ABCD4-224ENST00000556119 ZMYM3Q14202 1370 aa22.43■■□□□ 1.18
ABCD4-224ENST00000556119 SCAF1Q9H7N4 1312 aaKnown RBP22.43■■□□□ 1.18
ABCD4-224ENST00000556119 PIP4K2BP78356 416 aa22.43■■□□□ 1.18
ABCD4-224ENST00000556119 PLA2R1Q13018 1463 aa22.42■■□□□ 1.18
ABCD4-224ENST00000556119 TCOF1Q13428 1488 aaKnown RBP22.42■■□□□ 1.18
ABCD4-224ENST00000556119 ATP1B4Q9UN42 357 aaPredicted RBP22.42■■□□□ 1.18
ABCD4-224ENST00000556119 ZNF142P52746 1687 aaPredicted RBP22.42■■□□□ 1.18
ABCD4-224ENST00000556119 CDK11AQ9UQ88 783 aaPredicted RBP22.41■■□□□ 1.18
ABCD4-224ENST00000556119 MYO3AQ8NEV4 1616 aa22.39■■□□□ 1.17
ABCD4-224ENST00000556119 ITSN2Q9NZM3 1697 aa22.38■■□□□ 1.17
ABCD4-224ENST00000556119 TROQ12816 1431 aaPredicted RBP22.38■■□□□ 1.17
ABCD4-224ENST00000556119 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
ABCD4-224ENST00000556119 PPP6R1Q9UPN7 881 aa22.37■■□□□ 1.17
ABCD4-224ENST00000556119 CEP170BQ9Y4F5 1589 aaPredicted RBP22.37■■□□□ 1.17
ABCD4-224ENST00000556119 ABCC1P33527 1531 aa22.36■■□□□ 1.17
ABCD4-224ENST00000556119 TOM1O60784 492 aa22.36■■□□□ 1.17
ABCD4-224ENST00000556119 CLTCQ00610 1675 aaKnown RBP22.34■■□□□ 1.17
ABCD4-224ENST00000556119 PREX2Q70Z35 1606 aa22.32■■□□□ 1.16
ABCD4-224ENST00000556119 LRRIQ1Q96JM4 1722 aa22.32■■□□□ 1.16
ABCD4-224ENST00000556119 CLIP1P30622 1438 aa22.31■■□□□ 1.16
ABCD4-224ENST00000556119 PTPRKQ15262 1439 aa22.31■■□□□ 1.16
ABCD4-224ENST00000556119 FMN1Q68DA7 1419 aa22.3■■□□□ 1.16
ABCD4-224ENST00000556119 CPS1P31327 1500 aa22.28■■□□□ 1.16
ABCD4-224ENST00000556119 ALKQ9UM73 1620 aa22.27■■□□□ 1.16
ABCD4-224ENST00000556119 SAMD9LQ8IVG5 1584 aa22.26■■□□□ 1.15
ABCD4-224ENST00000556119 SHANK2Q9UPX8 1470 aa22.26■■□□□ 1.15
ABCD4-224ENST00000556119 EEA1Q15075 1411 aa22.25■■□□□ 1.15
ABCD4-224ENST00000556119 DNMT1P26358 1616 aaKnown RBP22.25■■□□□ 1.15
ABCD4-224ENST00000556119 POLR1AO95602 1720 aaPredicted RBP22.24■■□□□ 1.15
ABCD4-224ENST00000556119 CDC42BPAQ5VT25 1732 aa22.23■■□□□ 1.15
ABCD4-224ENST00000556119 NEURL4Q96JN8 1562 aa22.22■■□□□ 1.15
ABCD4-224ENST00000556119 A2ML1A8K2U0 1454 aa22.22■■□□□ 1.15
ABCD4-224ENST00000556119 ARHGAP35Q9NRY4 1499 aa22.21■■□□□ 1.15
ABCD4-224ENST00000556119 RGS17Q9UGC6 210 aaPredicted RBP22.2■■□□□ 1.14
ABCD4-224ENST00000556119 PLXNC1O60486 1568 aa22.19■■□□□ 1.14
ABCD4-224ENST00000556119 SPAG9O60271 1321 aaKnown RBP22.18■■□□□ 1.14
ABCD4-224ENST00000556119 GGT6Q6P531 493 aa22.18■■□□□ 1.14
ABCD4-224ENST00000556119 VWDEQ8N2E2 1590 aa22.16■■□□□ 1.14
ABCD4-224ENST00000556119 SENP3Q9H4L4 574 aaPredicted RBP22.16■■□□□ 1.14
ABCD4-224ENST00000556119 HNRNPMP52272 730 aaKnown RBP eCLIP22.14■■□□□ 1.13
ABCD4-224ENST00000556119 ZNF777Q9ULD5 760 aaPredicted RBP22.14■■□□□ 1.13
ABCD4-224ENST00000556119 ATP7AQ04656 1500 aa22.14■■□□□ 1.13
ABCD4-224ENST00000556119 SYCP2Q9BX26 1530 aa22.14■■□□□ 1.13
ABCD4-224ENST00000556119 A2MP01023 1474 aa22.14■■□□□ 1.13
ABCD4-224ENST00000556119 INO80Q9ULG1 1556 aaPredicted RBP22.11■■□□□ 1.13
ABCD4-224ENST00000556119 STRCP1A6NGW2 1772 aa22.09■■□□□ 1.13
ABCD4-224ENST00000556119 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.13
ABCD4-224ENST00000556119 ANKLE2Q86XL3 938 aa22.08■■□□□ 1.13
ABCD4-224ENST00000556119 EHMT2Q96KQ7 1210 aa22.08■■□□□ 1.13
ABCD4-224ENST00000556119 FBXO31Q5XUX0 539 aaPredicted RBP22.07■■□□□ 1.12
ABCD4-224ENST00000556119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.06■■□□□ 1.12
ABCD4-224ENST00000556119 GPATCH8Q9UKJ3 1502 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms