RNA–Protein interactions for RNA: ENST00000555127.1

HNRNPC-215, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-215ENST00000555127 DNMBPQ6XZF7 1577 aa11.61□□□□□ -0.55
HNRNPC-215ENST00000555127 EMP3P54852 163 aa11.59□□□□□ -0.55
HNRNPC-215ENST00000555127 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-215ENST00000555127 ZNF608Q9ULD9 1512 aaPredicted RBP11.57□□□□□ -0.56
HNRNPC-215ENST00000555127 FAM212AQ96EL1 285 aa11.57□□□□□ -0.56
HNRNPC-215ENST00000555127 SYNJ1O43426 1573 aa11.57□□□□□ -0.56
HNRNPC-215ENST00000555127 RAD54L2Q9Y4B4 1467 aa11.57□□□□□ -0.56
HNRNPC-215ENST00000555127 HS3ST6Q96QI5 342 aa11.56□□□□□ -0.56
HNRNPC-215ENST00000555127 FGD5Q6ZNL6 1462 aa11.56□□□□□ -0.56
HNRNPC-215ENST00000555127 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
HNRNPC-215ENST00000555127 PCDHB8Q9UN66 801 aa11.55□□□□□ -0.56
HNRNPC-215ENST00000555127 WRNQ14191 1432 aaPredicted RBP eCLIP11.54□□□□□ -0.56
HNRNPC-215ENST00000555127 PYGBP11216 843 aa11.54□□□□□ -0.56
HNRNPC-215ENST00000555127 TARBP1Q13395 1621 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-215ENST00000555127 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-215ENST00000555127 IFT140Q96RY7 1462 aa11.51□□□□□ -0.57
HNRNPC-215ENST00000555127 SOGA1O94964 1423 aa11.5□□□□□ -0.57
HNRNPC-215ENST00000555127 TOP2BQ02880 1626 aa11.49□□□□□ -0.57
HNRNPC-215ENST00000555127 ZBTB47Q9UFB7 747 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-215ENST00000555127 AQRO60306 1485 aaKnown RBP eCLIP11.49□□□□□ -0.576e-12■■■■■ 27.1
HNRNPC-215ENST00000555127 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
HNRNPC-215ENST00000555127 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
HNRNPC-215ENST00000555127 C3orf67Q6ZVT6 689 aa11.46□□□□□ -0.57
HNRNPC-215ENST00000555127 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
HNRNPC-215ENST00000555127 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
HNRNPC-215ENST00000555127 WDR97A6NE52 1622 aa11.43□□□□□ -0.58
HNRNPC-215ENST00000555127 EIF4G3O43432 1585 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-215ENST00000555127 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
HNRNPC-215ENST00000555127 L3MBTL3Q96JM7 780 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-215ENST00000555127 RUSC2Q8N2Y8 1516 aa11.35□□□□□ -0.59
HNRNPC-215ENST00000555127 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-215ENST00000555127 GAPVD1Q14C86 1478 aa11.35□□□□□ -0.59
HNRNPC-215ENST00000555127 SNAPC4Q5SXM2 1469 aa11.34□□□□□ -0.59
HNRNPC-215ENST00000555127 DPY19L2Q6NUT2 758 aa11.34□□□□□ -0.59
HNRNPC-215ENST00000555127 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.34□□□□□ -0.59
HNRNPC-215ENST00000555127 GRIN2BQ13224 1484 aa11.33□□□□□ -0.6
HNRNPC-215ENST00000555127 HOXB3P14651 431 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-215ENST00000555127 GOLGA2Q08379 1002 aa11.31□□□□□ -0.6
HNRNPC-215ENST00000555127 IGF1RP08069 1367 aa11.3□□□□□ -0.6
HNRNPC-215ENST00000555127 RIMBP3CA6NJZ7 1639 aa11.29□□□□□ -0.6
HNRNPC-215ENST00000555127 RIMBP3BA6NNM3 1639 aa11.29□□□□□ -0.6
HNRNPC-215ENST00000555127 RIMBP3Q9UFD9 1639 aa11.29□□□□□ -0.6
HNRNPC-215ENST00000555127 RNF166Q96A37 237 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-215ENST00000555127 MAGI1Q96QZ7 1491 aaPredicted RBP11.27□□□□□ -0.6
HNRNPC-215ENST00000555127 PBRM1Q86U86 1689 aa11.27□□□□□ -0.61
HNRNPC-215ENST00000555127 ADAMTS12P58397 1594 aa11.26□□□□□ -0.61
HNRNPC-215ENST00000555127 ERICH3Q5RHP9 1530 aa11.25□□□□□ -0.61
HNRNPC-215ENST00000555127 KIF27Q86VH2 1401 aa11.25□□□□□ -0.61
HNRNPC-215ENST00000555127 SYNJ2O15056 1496 aa11.25□□□□□ -0.61
HNRNPC-215ENST00000555127 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
HNRNPC-215ENST00000555127 ILDR1Q86SU0 546 aaPredicted RBP11.24□□□□□ -0.61
HNRNPC-215ENST00000555127 PSEN1P49768 467 aa11.23□□□□□ -0.61
HNRNPC-215ENST00000555127 ZNF467Q7Z7K2 595 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-215ENST00000555127 ERBB3P21860 1342 aa11.23□□□□□ -0.61
HNRNPC-215ENST00000555127 CHD1O14646 1710 aa11.23□□□□□ -0.61
HNRNPC-215ENST00000555127 FHAD1B1AJZ9 1412 aa11.22□□□□□ -0.61
HNRNPC-215ENST00000555127 GRIN2AQ12879 1464 aa11.21□□□□□ -0.61
HNRNPC-215ENST00000555127 NUP160Q12769 1436 aa11.2□□□□□ -0.62
HNRNPC-215ENST00000555127 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
HNRNPC-215ENST00000555127 ARHGEF11O15085 1522 aa11.19□□□□□ -0.62
HNRNPC-215ENST00000555127 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
HNRNPC-215ENST00000555127 MYT1LQ9UL68 1186 aa11.19□□□□□ -0.62
HNRNPC-215ENST00000555127 CEP170Q5SW79 1584 aa11.19□□□□□ -0.62
HNRNPC-215ENST00000555127 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
HNRNPC-215ENST00000555127 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-215ENST00000555127 BOLA1Q9Y3E2 137 aa11.18□□□□□ -0.62
HNRNPC-215ENST00000555127 CARMIL1Q5VZK9 1371 aa11.17□□□□□ -0.62
HNRNPC-215ENST00000555127 PRXQ9BXM0 1461 aa11.16□□□□□ -0.62
HNRNPC-215ENST00000555127 ERCC6L2Q5T890 1561 aa11.13□□□□□ -0.63
HNRNPC-215ENST00000555127 FKBP8Q14318 412 aa11.13□□□□□ -0.63
HNRNPC-215ENST00000555127 CABP2Q9NPB3 220 aa11.13□□□□□ -0.63
HNRNPC-215ENST00000555127 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-215ENST00000555127 GSE1Q14687 1217 aa11.12□□□□□ -0.63
HNRNPC-215ENST00000555127 CUL7Q14999 1698 aa11.11□□□□□ -0.63
HNRNPC-215ENST00000555127 DOK7Q18PE1 504 aa11.11□□□□□ -0.63
HNRNPC-215ENST00000555127 FAM9AQ8IZU1 332 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-215ENST00000555127 G3V3G9 751 aa11.1□□□□□ -0.63
HNRNPC-215ENST00000555127 RAPGEF2Q9Y4G8 1499 aa11.09□□□□□ -0.63
HNRNPC-215ENST00000555127 ARAP1Q96P48 1450 aa11.08□□□□□ -0.64
HNRNPC-215ENST00000555127 CYB5RLQ6IPT4 315 aa11.08□□□□□ -0.64
HNRNPC-215ENST00000555127 PDAP1Q13442 181 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-215ENST00000555127 ZNF687Q8N1G0 1237 aa11.07□□□□□ -0.64
HNRNPC-215ENST00000555127 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
HNRNPC-215ENST00000555127 KIAA0586Q9BVV6 1533 aa11.06□□□□□ -0.64
HNRNPC-215ENST00000555127 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
HNRNPC-215ENST00000555127 EEA1Q15075 1411 aa11.06□□□□□ -0.64
HNRNPC-215ENST00000555127 TMEM92Q6UXU6 159 aa11.04□□□□□ -0.64
HNRNPC-215ENST00000555127 JPH4Q96JJ6 628 aa11.03□□□□□ -0.64
HNRNPC-215ENST00000555127 PRG4Q92954 1404 aaPredicted RBP11.01□□□□□ -0.65
HNRNPC-215ENST00000555127 RIMBP2O15034 1052 aa11.01□□□□□ -0.65
HNRNPC-215ENST00000555127 DISP1Q96F81 1524 aa11□□□□□ -0.65
HNRNPC-215ENST00000555127 GPR153Q6NV75 609 aa11□□□□□ -0.65
HNRNPC-215ENST00000555127 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
HNRNPC-215ENST00000555127 KIF21BO75037 1637 aa10.98□□□□□ -0.65
HNRNPC-215ENST00000555127 UGGT2Q9NYU1 1516 aa10.98□□□□□ -0.65
HNRNPC-215ENST00000555127 IQGAP2Q13576 1575 aa10.98□□□□□ -0.65
HNRNPC-215ENST00000555127 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-215ENST00000555127 EFCAB3Q8N7B9 438 aa10.94□□□□□ -0.66
HNRNPC-215ENST00000555127 FBXO3Q9UK99 471 aa10.94□□□□□ -0.66
HNRNPC-215ENST00000555127 PTGER2P43116 358 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms