RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 MLECQ14165 292 aa17.75■□□□□ 0.43
SRP54-205ENST00000554803 IQSEC2Q5JU85 1478 aa17.75■□□□□ 0.43
SRP54-205ENST00000554803 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
SRP54-205ENST00000554803 P3H3Q8IVL6 736 aa17.74■□□□□ 0.43
SRP54-205ENST00000554803 LTBP4Q8N2S1 1624 aa17.73■□□□□ 0.43
SRP54-205ENST00000554803 NUP153P49790 1475 aaKnown RBP17.73■□□□□ 0.43
SRP54-205ENST00000554803 PTPRTO14522 1441 aa17.72■□□□□ 0.43
SRP54-205ENST00000554803 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.72■□□□□ 0.431e-7■■□□□ 13.5
SRP54-205ENST00000554803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
SRP54-205ENST00000554803 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
SRP54-205ENST00000554803 UHRF1BP1Q6BDS2 1440 aa17.71■□□□□ 0.43
SRP54-205ENST00000554803 ATP10AO60312 1499 aa17.68■□□□□ 0.42
SRP54-205ENST00000554803 C9orf84Q5VXU9 1444 aa17.67■□□□□ 0.42
SRP54-205ENST00000554803 CEBPAP49715 358 aaPredicted RBP17.67■□□□□ 0.42
SRP54-205ENST00000554803 C3P01024 1663 aa17.65■□□□□ 0.42
SRP54-205ENST00000554803 PLEKHD1A6NEE1 506 aa17.65■□□□□ 0.42
SRP54-205ENST00000554803 SCAPERQ9BY12 1400 aa17.63■□□□□ 0.41
SRP54-205ENST00000554803 MYO5CQ9NQX4 1742 aa17.58■□□□□ 0.41
SRP54-205ENST00000554803 PLCH2O75038 1416 aa17.57■□□□□ 0.4
SRP54-205ENST00000554803 NCOA1Q15788 1441 aa17.56■□□□□ 0.4
SRP54-205ENST00000554803 REREQ9P2R6 1566 aa17.56■□□□□ 0.4
SRP54-205ENST00000554803 KDM5CP41229 1560 aa17.54■□□□□ 0.4
SRP54-205ENST00000554803 DIP2CQ9Y2E4 1556 aa17.53■□□□□ 0.4
SRP54-205ENST00000554803 EEA1Q15075 1411 aa17.53■□□□□ 0.4
SRP54-205ENST00000554803 ZNF518AQ6AHZ1 1483 aa17.52■□□□□ 0.4
SRP54-205ENST00000554803 MED1Q15648 1581 aaPredicted RBP17.51■□□□□ 0.39
SRP54-205ENST00000554803 TRAPPC8Q9Y2L5 1435 aa17.51■□□□□ 0.39
SRP54-205ENST00000554803 CDK13Q14004 1512 aaKnown RBP17.5■□□□□ 0.39
SRP54-205ENST00000554803 CAMSAP1Q5T5Y3 1602 aa17.5■□□□□ 0.39
SRP54-205ENST00000554803 ABCA6Q8N139 1617 aa17.5■□□□□ 0.39
SRP54-205ENST00000554803 AGLP35573 1532 aa17.49■□□□□ 0.39
SRP54-205ENST00000554803 UBAP1LF5GYI3 381 aa17.49■□□□□ 0.39
SRP54-205ENST00000554803 SUPT6HQ7KZ85 1726 aaKnown RBP17.47■□□□□ 0.39
SRP54-205ENST00000554803 MROH2AA6NES4 1674 aa17.46■□□□□ 0.39
SRP54-205ENST00000554803 EFCAB2Q5VUJ9 269 aa17.46■□□□□ 0.39
SRP54-205ENST00000554803 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
SRP54-205ENST00000554803 ZNF335Q9H4Z2 1342 aaPredicted RBP17.45■□□□□ 0.38
SRP54-205ENST00000554803 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
SRP54-205ENST00000554803 ZNF142P52746 1687 aaPredicted RBP17.43■□□□□ 0.38
SRP54-205ENST00000554803 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
SRP54-205ENST00000554803 CNTLNQ9NXG0 1405 aa17.42■□□□□ 0.38
SRP54-205ENST00000554803 ESF1Q9H501 851 aaKnown RBP17.42■□□□□ 0.38
SRP54-205ENST00000554803 KIF14Q15058 1648 aa17.42■□□□□ 0.38
SRP54-205ENST00000554803 MLH3Q9UHC1 1453 aa17.42■□□□□ 0.38
SRP54-205ENST00000554803 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
SRP54-205ENST00000554803 NPATQ14207 1427 aa17.4■□□□□ 0.38
SRP54-205ENST00000554803 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
SRP54-205ENST00000554803 CDC42BPBQ9Y5S2 1711 aa17.4■□□□□ 0.38
SRP54-205ENST00000554803 ARHGAP5Q13017 1502 aa17.4■□□□□ 0.38
SRP54-205ENST00000554803 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
SRP54-205ENST00000554803 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
SRP54-205ENST00000554803 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
SRP54-205ENST00000554803 MYT1LQ9UL68 1186 aa17.38■□□□□ 0.37
SRP54-205ENST00000554803 MYO3AQ8NEV4 1616 aa17.38■□□□□ 0.37
SRP54-205ENST00000554803 NCKAP5LQ9HCH0 1330 aa17.38■□□□□ 0.37
SRP54-205ENST00000554803 KIDINS220Q9ULH0 1771 aa17.38■□□□□ 0.37
SRP54-205ENST00000554803 ITSN2Q9NZM3 1697 aa17.37■□□□□ 0.37
SRP54-205ENST00000554803 TCOF1Q13428 1488 aaKnown RBP17.36■□□□□ 0.37
SRP54-205ENST00000554803 LOC105371045A0A1W2PR82 267 aa17.35■□□□□ 0.37
SRP54-205ENST00000554803 HSPA1LP34931 641 aa17.35■□□□□ 0.37
SRP54-205ENST00000554803 PKD2Q13563 968 aa17.34■□□□□ 0.37
SRP54-205ENST00000554803 CEP170BQ9Y4F5 1589 aaPredicted RBP17.33■□□□□ 0.37
SRP54-205ENST00000554803 ABCC1P33527 1531 aa17.33■□□□□ 0.37
SRP54-205ENST00000554803 CLTCQ00610 1675 aaKnown RBP17.32■□□□□ 0.36
SRP54-205ENST00000554803 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
SRP54-205ENST00000554803 POLR1AO95602 1720 aaPredicted RBP17.3■□□□□ 0.36
SRP54-205ENST00000554803 TROQ12816 1431 aaPredicted RBP17.3■□□□□ 0.36
SRP54-205ENST00000554803 ZMYM3Q14202 1370 aa17.29■□□□□ 0.36
SRP54-205ENST00000554803 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
SRP54-205ENST00000554803 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
SRP54-205ENST00000554803 LRRIQ1Q96JM4 1722 aa17.29■□□□□ 0.36
SRP54-205ENST00000554803 PHF23Q9BUL5 403 aaPredicted RBP17.28■□□□□ 0.36
SRP54-205ENST00000554803 PPP6R1Q9UPN7 881 aa17.28■□□□□ 0.36
SRP54-205ENST00000554803 CPS1P31327 1500 aa17.27■□□□□ 0.36
SRP54-205ENST00000554803 TOM1O60784 492 aa17.27■□□□□ 0.36
SRP54-205ENST00000554803 PIP4K2BP78356 416 aa17.27■□□□□ 0.36
SRP54-205ENST00000554803 CLIP1P30622 1438 aa17.26■□□□□ 0.35
SRP54-205ENST00000554803 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
SRP54-205ENST00000554803 FMN1Q68DA7 1419 aa17.24■□□□□ 0.35
SRP54-205ENST00000554803 CDC42BPAQ5VT25 1732 aa17.24■□□□□ 0.35
SRP54-205ENST00000554803 DNMT1P26358 1616 aaKnown RBP17.23■□□□□ 0.35
SRP54-205ENST00000554803 ALKQ9UM73 1620 aa17.23■□□□□ 0.35
SRP54-205ENST00000554803 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
SRP54-205ENST00000554803 NEURL4Q96JN8 1562 aa17.22■□□□□ 0.35
SRP54-205ENST00000554803 ATP1B4Q9UN42 357 aaPredicted RBP17.21■□□□□ 0.35
SRP54-205ENST00000554803 PLXNC1O60486 1568 aa17.2■□□□□ 0.34
SRP54-205ENST00000554803 SHANK2Q9UPX8 1470 aa17.2■□□□□ 0.34
SRP54-205ENST00000554803 A2ML1A8K2U0 1454 aa17.19■□□□□ 0.34
SRP54-205ENST00000554803 UBTFP17480 764 aaKnown RBP17.17■□□□□ 0.34
SRP54-205ENST00000554803 VWDEQ8N2E2 1590 aa17.16■□□□□ 0.34
SRP54-205ENST00000554803 INO80Q9ULG1 1556 aaPredicted RBP17.15■□□□□ 0.34
SRP54-205ENST00000554803 ARHGAP35Q9NRY4 1499 aa17.14■□□□□ 0.33
SRP54-205ENST00000554803 ATP7AQ04656 1500 aa17.14■□□□□ 0.33
SRP54-205ENST00000554803 SYCP2Q9BX26 1530 aa17.13■□□□□ 0.33
SRP54-205ENST00000554803 A2MP01023 1474 aa17.12■□□□□ 0.33
SRP54-205ENST00000554803 ADGBQ8N7X0 1667 aa17.11■□□□□ 0.33
SRP54-205ENST00000554803 SPAG9O60271 1321 aaKnown RBP17.11■□□□□ 0.33
SRP54-205ENST00000554803 RNF17Q9BXT8 1623 aaKnown RBP17.1■□□□□ 0.33
SRP54-205ENST00000554803 STRCP1A6NGW2 1772 aa17.1■□□□□ 0.33
SRP54-205ENST00000554803 RGS17Q9UGC6 210 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms