RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 BBXQ8WY36 941 aaPredicted RBP9.04□□□□□ -0.96
VTI1B-203ENST00000554636 ABCC9O60706 1549 aa9.04□□□□□ -0.96
VTI1B-203ENST00000554636 C2orf72A6NCS6 295 aa9.03□□□□□ -0.96
VTI1B-203ENST00000554636 TMC2Q8TDI7 906 aa9.03□□□□□ -0.96
VTI1B-203ENST00000554636 POTEMA6NI47 508 aa9.01□□□□□ -0.97
VTI1B-203ENST00000554636 POTEGQ6S5H5 508 aa9.01□□□□□ -0.97
VTI1B-203ENST00000554636 ZNF710Q8N1W2 664 aa9□□□□□ -0.97
VTI1B-203ENST00000554636 MARVELD3Q96A59 401 aa9□□□□□ -0.97
VTI1B-203ENST00000554636 ZBTB4Q9P1Z0 1013 aaPredicted RBP9□□□□□ -0.97
VTI1B-203ENST00000554636 HOXB3P14651 431 aaPredicted RBP8.99□□□□□ -0.97
VTI1B-203ENST00000554636 KIF3CO14782 793 aa8.98□□□□□ -0.97
VTI1B-203ENST00000554636 CFAP44Q96MT7 982 aa8.98□□□□□ -0.97
VTI1B-203ENST00000554636 DOK7Q18PE1 504 aa8.97□□□□□ -0.97
VTI1B-203ENST00000554636 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
VTI1B-203ENST00000554636 SPRYD3Q8NCJ5 442 aa8.95□□□□□ -0.98
VTI1B-203ENST00000554636 RIMBP2O15034 1052 aa8.94□□□□□ -0.98
VTI1B-203ENST00000554636 EMP3P54852 163 aa8.94□□□□□ -0.98
VTI1B-203ENST00000554636 DSG2Q14126 1118 aa8.92□□□□□ -0.98
VTI1B-203ENST00000554636 CADPS2Q86UW7 1296 aa8.92□□□□□ -0.98
VTI1B-203ENST00000554636 GPHNQ9NQX3 736 aaPredicted RBP8.92□□□□□ -0.98
VTI1B-203ENST00000554636 KHSRPQ92945 711 aaKnown RBP eCLIP8.91□□□□□ -0.98
VTI1B-203ENST00000554636 NCKAP5LQ9HCH0 1330 aa8.9□□□□□ -0.98
VTI1B-203ENST00000554636 ARSIQ5FYB1 569 aa8.9□□□□□ -0.98
VTI1B-203ENST00000554636 PLPP6Q8IY26 295 aa8.9□□□□□ -0.98
VTI1B-203ENST00000554636 CRISPLD2Q9H0B8 497 aa8.89□□□□□ -0.99
VTI1B-203ENST00000554636 FAM205CA6NFA0 338 aa8.88□□□□□ -0.99
VTI1B-203ENST00000554636 FOXK1P85037 733 aa8.88□□□□□ -0.99
VTI1B-203ENST00000554636 LARP6Q9BRS8 491 aaKnown RBP8.88□□□□□ -0.99
VTI1B-203ENST00000554636 HOXB1P14653 301 aaPredicted RBP8.87□□□□□ -0.99
VTI1B-203ENST00000554636 PDE4AP27815 886 aa8.87□□□□□ -0.99
VTI1B-203ENST00000554636 PPP1R15BQ5SWA1 713 aa8.86□□□□□ -0.99
VTI1B-203ENST00000554636 GPR153Q6NV75 609 aa8.86□□□□□ -0.99
VTI1B-203ENST00000554636 UPF1Q92900 1129 aaKnown RBP eCLIP8.85□□□□□ -0.991e-7■□□□□ 10
VTI1B-203ENST00000554636 ZSWIM6Q9HCJ5 1215 aa8.85□□□□□ -0.99
VTI1B-203ENST00000554636 ERBB3P21860 1342 aa8.84□□□□□ -0.99
VTI1B-203ENST00000554636 NUDT7P0C024 238 aa8.84□□□□□ -0.99
VTI1B-203ENST00000554636 DDX27Q96GQ7 796 aaKnown RBP8.84□□□□□ -0.99
VTI1B-203ENST00000554636 HS3ST6Q96QI5 342 aa8.84□□□□□ -0.99
VTI1B-203ENST00000554636 PCDHGA4Q9Y5G9 962 aa8.84□□□□□ -0.99
VTI1B-203ENST00000554636 POTEB3A0JP26 581 aa8.83□□□□□ -1
VTI1B-203ENST00000554636 POTEBQ6S5H4 581 aa8.83□□□□□ -1
VTI1B-203ENST00000554636 CDAN1Q8IWY9 1227 aa8.83□□□□□ -1
VTI1B-203ENST00000554636 VARS2Q5ST30 1063 aaKnown RBP8.82□□□□□ -1
VTI1B-203ENST00000554636 SLC34A2O95436 690 aa8.8□□□□□ -1
VTI1B-203ENST00000554636 MFSD10Q14728 455 aa8.78□□□□□ -1
VTI1B-203ENST00000554636 PTCD2Q8WV60 388 aaKnown RBP8.77□□□□□ -1.01
VTI1B-203ENST00000554636 TSHZ2Q9NRE2 1034 aa8.76□□□□□ -1.01
VTI1B-203ENST00000554636 LHX6Q9UPM6 363 aa8.76□□□□□ -1.01
VTI1B-203ENST00000554636 ZNF316A6NFI3 1004 aaPredicted RBP8.75□□□□□ -1.01
VTI1B-203ENST00000554636 TBC1D12O60347 775 aa8.75□□□□□ -1.01
VTI1B-203ENST00000554636 PLSCR2Q9NRY7 297 aa8.75□□□□□ -1.01
VTI1B-203ENST00000554636 OXER1Q8TDS5 423 aa8.74□□□□□ -1.01
VTI1B-203ENST00000554636 PCDH10Q9P2E7 1040 aa8.74□□□□□ -1.01
VTI1B-203ENST00000554636 EMILIN3Q9NT22 766 aa8.73□□□□□ -1.01
VTI1B-203ENST00000554636 MAP3K9P80192 1104 aa8.71□□□□□ -1.02
VTI1B-203ENST00000554636 PLCB2Q00722 1185 aa8.71□□□□□ -1.02
VTI1B-203ENST00000554636 WDR70Q9NW82 654 aa8.71□□□□□ -1.02
VTI1B-203ENST00000554636 KRTAP3-3Q9BYR6 98 aa8.69□□□□□ -1.02
VTI1B-203ENST00000554636 KRTAP3-2Q9BYR7 98 aa8.69□□□□□ -1.02
VTI1B-203ENST00000554636 KDM4FA0A1W2PPD8 638 aa8.68□□□□□ -1.02
VTI1B-203ENST00000554636 DPYSL4O14531 572 aa8.68□□□□□ -1.02
VTI1B-203ENST00000554636 EVI5O60447 810 aa8.68□□□□□ -1.02
VTI1B-203ENST00000554636 ZNF687Q8N1G0 1237 aa8.68□□□□□ -1.02
VTI1B-203ENST00000554636 RB1CC1Q8TDY2 1594 aa8.66□□□□□ -1.02
VTI1B-203ENST00000554636 HAP1P54257 671 aaPredicted RBP8.66□□□□□ -1.02
VTI1B-203ENST00000554636 AXIN2Q9Y2T1 843 aa8.66□□□□□ -1.02
VTI1B-203ENST00000554636 CAMK2BQ13554 666 aa8.65□□□□□ -1.02
VTI1B-203ENST00000554636 ZNF454Q8N9F8 522 aa8.65□□□□□ -1.02
VTI1B-203ENST00000554636 NACADO15069 1562 aa8.65□□□□□ -1.03
VTI1B-203ENST00000554636 E2F4Q16254 413 aa8.64□□□□□ -1.03
VTI1B-203ENST00000554636 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
VTI1B-203ENST00000554636 PSDA5PKW4 1024 aaPredicted RBP8.61□□□□□ -1.03
VTI1B-203ENST00000554636 POTEEQ6S8J3 1075 aa8.61□□□□□ -1.03
VTI1B-203ENST00000554636 ANKRD13DQ6ZTN6 518 aa8.61□□□□□ -1.03
VTI1B-203ENST00000554636 PSEN2P49810 448 aa8.59□□□□□ -1.03
VTI1B-203ENST00000554636 SPNS2Q8IVW8 549 aa8.59□□□□□ -1.03
VTI1B-203ENST00000554636 KCNK17Q96T54 332 aa8.59□□□□□ -1.03
VTI1B-203ENST00000554636 FOSBP53539 338 aa8.58□□□□□ -1.04
VTI1B-203ENST00000554636 JPH4Q96JJ6 628 aa8.58□□□□□ -1.04
VTI1B-203ENST00000554636 ANO8Q9HCE9 1232 aaPredicted RBP8.58□□□□□ -1.04
VTI1B-203ENST00000554636 MYO15BQ96JP2 1530 aa8.58□□□□□ -1.04
VTI1B-203ENST00000554636 PBX2P40425 430 aa8.57□□□□□ -1.04
VTI1B-203ENST00000554636 LSM11P83369 360 aaKnown RBP eCLIP8.57□□□□□ -1.04
VTI1B-203ENST00000554636 DDX12PQ92771 950 aa8.57□□□□□ -1.04
VTI1B-203ENST00000554636 ZCCHC6Q5VYS8 1495 aaKnown RBP8.57□□□□□ -1.04
VTI1B-203ENST00000554636 ARHGAP33O14559 1287 aa8.56□□□□□ -1.04
VTI1B-203ENST00000554636 DMRTA1Q5VZB9 504 aa8.56□□□□□ -1.04
VTI1B-203ENST00000554636 KCNV2Q8TDN2 545 aa8.55□□□□□ -1.04
VTI1B-203ENST00000554636 ZDHHC16Q969W1 377 aa8.55□□□□□ -1.04
VTI1B-203ENST00000554636 ADAM33Q9BZ11 813 aa8.55□□□□□ -1.04
VTI1B-203ENST00000554636 PCDHGA10Q9Y5H3 936 aa8.55□□□□□ -1.04
VTI1B-203ENST00000554636 PDIA6Q15084 440 aa8.54□□□□□ -1.04
VTI1B-203ENST00000554636 MMRN1Q13201 1228 aa8.53□□□□□ -1.04
VTI1B-203ENST00000554636 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
VTI1B-203ENST00000554636 KCNH8Q96L42 1107 aa8.53□□□□□ -1.04
VTI1B-203ENST00000554636 NBR1Q14596 966 aa8.52□□□□□ -1.05
VTI1B-203ENST00000554636 BCL2L12Q9HB09 334 aa8.52□□□□□ -1.05
VTI1B-203ENST00000554636 DCAF1Q9Y4B6 1507 aa8.51□□□□□ -1.05
VTI1B-203ENST00000554636 GRXCR2A6NFK2 248 aa8.51□□□□□ -1.05
VTI1B-203ENST00000554636 PHF14O94880 888 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms