RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 INO80Q9ULG1 1556 aaPredicted RBP5.43□□□□□ -1.54
SEC23A-207ENST00000554615 MYOM3Q5VTT5 1437 aa5.43□□□□□ -1.54
SEC23A-207ENST00000554615 TIMELESSQ9UNS1 1208 aa5.43□□□□□ -1.54
SEC23A-207ENST00000554615 PHLDB1Q86UU1 1377 aa5.43□□□□□ -1.54
SEC23A-207ENST00000554615 CCNB3Q8WWL7 1395 aa5.43□□□□□ -1.54
SEC23A-207ENST00000554615 PTPRKQ15262 1439 aa5.43□□□□□ -1.54
SEC23A-207ENST00000554615 ACIN1Q9UKV3 1341 aaKnown RBP5.42□□□□□ -1.54
SEC23A-207ENST00000554615 UACAQ9BZF9 1416 aa5.42□□□□□ -1.54
SEC23A-207ENST00000554615 NAIPQ13075 1403 aa5.42□□□□□ -1.54
SEC23A-207ENST00000554615 SAMD9LQ8IVG5 1584 aa5.42□□□□□ -1.54
SEC23A-207ENST00000554615 UHRF1BP1Q6BDS2 1440 aa5.41□□□□□ -1.54
SEC23A-207ENST00000554615 PRDM15P57071 1507 aaPredicted RBP5.41□□□□□ -1.54
SEC23A-207ENST00000554615 MROH1Q8NDA8 1641 aa5.41□□□□□ -1.54
SEC23A-207ENST00000554615 MYOM1P52179 1685 aa5.41□□□□□ -1.54
SEC23A-207ENST00000554615 USP32Q8NFA0 1604 aa5.4□□□□□ -1.54
SEC23A-207ENST00000554615 PIK3C2BO00750 1634 aa5.4□□□□□ -1.54
SEC23A-207ENST00000554615 PCGF6Q9BYE7 350 aa5.4□□□□□ -1.54
SEC23A-207ENST00000554615 SPATA31E1Q6ZUB1 1445 aa5.4□□□□□ -1.55
SEC23A-207ENST00000554615 ERCC6Q03468 1493 aa5.4□□□□□ -1.55
SEC23A-207ENST00000554615 DUOX2Q9NRD8 1548 aa5.39□□□□□ -1.55
SEC23A-207ENST00000554615 SETD5Q9C0A6 1442 aa5.39□□□□□ -1.55
SEC23A-207ENST00000554615 DCAF8L2P0C7V8 631 aa5.39□□□□□ -1.55
SEC23A-207ENST00000554615 PZPP20742 1482 aa5.39□□□□□ -1.55
SEC23A-207ENST00000554615 ZCCHC11Q5TAX3 1644 aaKnown RBP5.39□□□□□ -1.55
SEC23A-207ENST00000554615 LMTK2Q8IWU2 1503 aa5.37□□□□□ -1.55
SEC23A-207ENST00000554615 ABCC2Q92887 1545 aa5.37□□□□□ -1.55
SEC23A-207ENST00000554615 KDM5AP29375 1690 aaKnown RBP5.37□□□□□ -1.55
SEC23A-207ENST00000554615 VIRMAQ69YN4 1812 aaKnown RBP5.37□□□□□ -1.55
SEC23A-207ENST00000554615 FAM135AQ9P2D6 1515 aa5.37□□□□□ -1.55
SEC23A-207ENST00000554615 PABPN1Q86U42 306 aaKnown RBP eCLIP5.37□□□□□ -1.55
SEC23A-207ENST00000554615 INSRP06213 1382 aa5.37□□□□□ -1.55
SEC23A-207ENST00000554615 SYNMO15061 1565 aa5.36□□□□□ -1.55
SEC23A-207ENST00000554615 RPRD2Q5VT52 1461 aaKnown RBP5.36□□□□□ -1.55
SEC23A-207ENST00000554615 CFAP74Q9C0B2 1584 aa5.36□□□□□ -1.55
SEC23A-207ENST00000554615 REREQ9P2R6 1566 aa5.36□□□□□ -1.55
SEC23A-207ENST00000554615 TET3O43151 1660 aa5.36□□□□□ -1.55
SEC23A-207ENST00000554615 TTC37Q6PGP7 1564 aa5.35□□□□□ -1.55
SEC23A-207ENST00000554615 ABCC1P33527 1531 aa5.35□□□□□ -1.55
SEC23A-207ENST00000554615 MADDQ8WXG6 1647 aa5.35□□□□□ -1.55
SEC23A-207ENST00000554615 SETD1AO15047 1707 aaKnown RBP5.35□□□□□ -1.55
SEC23A-207ENST00000554615 CLTCQ00610 1675 aaKnown RBP5.35□□□□□ -1.55
SEC23A-207ENST00000554615 ANKRD26Q9UPS8 1709 aa5.34□□□□□ -1.55
SEC23A-207ENST00000554615 ZNF608Q9ULD9 1512 aaPredicted RBP5.34□□□□□ -1.55
SEC23A-207ENST00000554615 ZNF518AQ6AHZ1 1483 aa5.34□□□□□ -1.55
SEC23A-207ENST00000554615 DAPK1P53355 1430 aa5.34□□□□□ -1.55
SEC23A-207ENST00000554615 GPATCH8Q9UKJ3 1502 aaKnown RBP5.33□□□□□ -1.56
SEC23A-207ENST00000554615 USP54Q70EL1 1684 aa5.33□□□□□ -1.56
SEC23A-207ENST00000554615 CAMSAP2Q08AD1 1489 aa5.33□□□□□ -1.56
SEC23A-207ENST00000554615 NRXN1Q9ULB1 1477 aa5.33□□□□□ -1.56
SEC23A-207ENST00000554615 PPLO60437 1756 aa5.33□□□□□ -1.56
SEC23A-207ENST00000554615 CDK13Q14004 1512 aaKnown RBP5.33□□□□□ -1.56
SEC23A-207ENST00000554615 FHOD3Q2V2M9 1422 aa5.33□□□□□ -1.56
SEC23A-207ENST00000554615 RIMS1Q86UR5 1692 aaKnown RBP5.33□□□□□ -1.56
SEC23A-207ENST00000554615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.33□□□□□ -1.56
SEC23A-207ENST00000554615 RAB3GAP2Q9H2M9 1393 aa5.33□□□□□ -1.56
SEC23A-207ENST00000554615 TMEM131LA2VDJ0 1609 aa5.32□□□□□ -1.56
SEC23A-207ENST00000554615 MAP3K4Q9Y6R4 1608 aa5.32□□□□□ -1.56
SEC23A-207ENST00000554615 ABCC5O15440 1437 aa5.32□□□□□ -1.56
SEC23A-207ENST00000554615 TROQ12816 1431 aaPredicted RBP5.32□□□□□ -1.56
SEC23A-207ENST00000554615 RALGAPBQ86X10 1494 aa5.32□□□□□ -1.56
SEC23A-207ENST00000554615 KANK4Q5T7N3 995 aaPredicted RBP5.31□□□□□ -1.56
SEC23A-207ENST00000554615 PPARGC1BQ86YN6 1023 aaKnown RBP5.31□□□□□ -1.56
SEC23A-207ENST00000554615 SETBP1Q9Y6X0 1596 aa5.31□□□□□ -1.56
SEC23A-207ENST00000554615 GLI2P10070 1586 aa5.31□□□□□ -1.56
SEC23A-207ENST00000554615 RICTORQ6R327 1708 aa5.3□□□□□ -1.56
SEC23A-207ENST00000554615 ZFYVE16Q7Z3T8 1539 aa5.3□□□□□ -1.56
SEC23A-207ENST00000554615 TRPM2O94759 1503 aa5.3□□□□□ -1.56
SEC23A-207ENST00000554615 KIAA1107Q9UPP5 1409 aa5.3□□□□□ -1.56
SEC23A-207ENST00000554615 NCOA1Q15788 1441 aa5.29□□□□□ -1.56
SEC23A-207ENST00000554615 CAMSAP1Q5T5Y3 1602 aa5.29□□□□□ -1.56
SEC23A-207ENST00000554615 CACNB1Q02641 598 aaPredicted RBP5.29□□□□□ -1.56
SEC23A-207ENST00000554615 MROH2AA6NES4 1674 aa5.29□□□□□ -1.56
SEC23A-207ENST00000554615 KIDINS220Q9ULH0 1771 aa5.29□□□□□ -1.56
SEC23A-207ENST00000554615 KNDC1Q76NI1 1749 aa5.28□□□□□ -1.56
SEC23A-207ENST00000554615 SHPRHQ149N8 1683 aa5.28□□□□□ -1.56
SEC23A-207ENST00000554615 GPRASP1Q5JY77 1395 aa5.27□□□□□ -1.57
SEC23A-207ENST00000554615 ANKRD30BQ9BXX2 1392 aa5.27□□□□□ -1.57
SEC23A-207ENST00000554615 HECW2Q9P2P5 1572 aa5.27□□□□□ -1.57
SEC23A-207ENST00000554615 ATP10BO94823 1461 aa5.27□□□□□ -1.57
SEC23A-207ENST00000554615 N4BP2Q86UW6 1770 aaPredicted RBP5.27□□□□□ -1.57
SEC23A-207ENST00000554615 UGGT1Q9NYU2 1555 aa5.26□□□□□ -1.57
SEC23A-207ENST00000554615 POTEHQ6S545 545 aa5.26□□□□□ -1.57
SEC23A-207ENST00000554615 CCDC141Q6ZP82 1450 aa5.26□□□□□ -1.57
SEC23A-207ENST00000554615 RTEL1-TNFRSF6BF6WH68 1400 aa5.26□□□□□ -1.57
SEC23A-207ENST00000554615 ERBINQ96RT1 1412 aa5.26□□□□□ -1.57
SEC23A-207ENST00000554615 SIGLEC1Q9BZZ2 1709 aa5.26□□□□□ -1.57
SEC23A-207ENST00000554615 PTPRTO14522 1441 aa5.26□□□□□ -1.57
SEC23A-207ENST00000554615 FRMPD1Q5SYB0 1578 aa5.26□□□□□ -1.57
SEC23A-207ENST00000554615 ZNF316A6NFI3 1004 aaPredicted RBP5.25□□□□□ -1.57
SEC23A-207ENST00000554615 PPP1R15AO75807 674 aaPredicted RBP5.25□□□□□ -1.57
SEC23A-207ENST00000554615 PLEKHH2Q8IVE3 1493 aa5.25□□□□□ -1.57
SEC23A-207ENST00000554615 KIF1BO60333 1816 aa5.24□□□□□ -1.57
SEC23A-207ENST00000554615 CLTCL1P53675 1640 aa5.24□□□□□ -1.57
SEC23A-207ENST00000554615 MYOM2P54296 1465 aa5.24□□□□□ -1.57
SEC23A-207ENST00000554615 SCAF1Q9H7N4 1312 aaKnown RBP5.23□□□□□ -1.57
SEC23A-207ENST00000554615 ADGRB3O60242 1522 aa5.23□□□□□ -1.57
SEC23A-207ENST00000554615 ARHGEF28Q8N1W1 1705 aaKnown RBP5.23□□□□□ -1.57
SEC23A-207ENST00000554615 ERCC6L2Q5T890 1561 aa5.22□□□□□ -1.57
SEC23A-207ENST00000554615 EFCAB6Q5THR3 1501 aa5.22□□□□□ -1.57
SEC23A-207ENST00000554615 PLA2R1Q13018 1463 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms