RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 PCF11O94913 1555 aaKnown RBP24.89■■□□□ 1.58
APEX1-204ENST00000553368 ATP1B4Q9UN42 357 aaPredicted RBP24.89■■□□□ 1.58
APEX1-204ENST00000553368 CDK11AQ9UQ88 783 aaPredicted RBP24.89■■□□□ 1.58
APEX1-204ENST00000553368 LMTK3Q96Q04 1460 aa24.89■■□□□ 1.57
APEX1-204ENST00000553368 EFCAB2Q5VUJ9 269 aa24.87■■□□□ 1.57
APEX1-204ENST00000553368 MYO5CQ9NQX4 1742 aa24.85■■□□□ 1.57
APEX1-204ENST00000553368 TROQ12816 1431 aaPredicted RBP24.84■■□□□ 1.57
APEX1-204ENST00000553368 KIF14Q15058 1648 aa24.83■■□□□ 1.56
APEX1-204ENST00000553368 ATP10AO60312 1499 aa24.81■■□□□ 1.56
APEX1-204ENST00000553368 LRRIQ1Q96JM4 1722 aa24.8■■□□□ 1.56
APEX1-204ENST00000553368 FBXO41Q8TF61 875 aa24.79■■□□□ 1.56
APEX1-204ENST00000553368 CLIP1P30622 1438 aa24.78■■□□□ 1.56
APEX1-204ENST00000553368 C9orf84Q5VXU9 1444 aa24.77■■□□□ 1.56
APEX1-204ENST00000553368 MLECQ14165 292 aa24.76■■□□□ 1.55
APEX1-204ENST00000553368 ZNF518AQ6AHZ1 1483 aa24.76■■□□□ 1.55
APEX1-204ENST00000553368 ARHGEF12Q9NZN5 1544 aa24.76■■□□□ 1.55
APEX1-204ENST00000553368 FER1L4A9Z1Z3 1794 aa24.75■■□□□ 1.55
APEX1-204ENST00000553368 ARHGAP5Q13017 1502 aa24.74■■□□□ 1.55
APEX1-204ENST00000553368 KDM5CP41229 1560 aa24.74■■□□□ 1.55
APEX1-204ENST00000553368 AFAP1Q8N556 730 aa24.72■■□□□ 1.55
APEX1-204ENST00000553368 CASKIN1Q8WXD9 1431 aa24.71■■□□□ 1.55
APEX1-204ENST00000553368 HSPA2P54652 639 aa24.71■■□□□ 1.55
APEX1-204ENST00000553368 PLPPR3Q6T4P5 718 aa24.7■■□□□ 1.54
APEX1-204ENST00000553368 CDC42BPBQ9Y5S2 1711 aa24.69■■□□□ 1.54
APEX1-204ENST00000553368 CCDC18Q5T9S5 1454 aa24.69■■□□□ 1.54
APEX1-204ENST00000553368 MLH3Q9UHC1 1453 aa24.65■■□□□ 1.54
APEX1-204ENST00000553368 REREQ9P2R6 1566 aa24.65■■□□□ 1.54
APEX1-204ENST00000553368 PREX2Q70Z35 1606 aa24.64■■□□□ 1.54
APEX1-204ENST00000553368 DIP2CQ9Y2E4 1556 aa24.64■■□□□ 1.54
APEX1-204ENST00000553368 TRAPPC8Q9Y2L5 1435 aa24.61■■□□□ 1.53
APEX1-204ENST00000553368 ABCC1P33527 1531 aa24.61■■□□□ 1.53
APEX1-204ENST00000553368 CEBPAP49715 358 aaPredicted RBP24.6■■□□□ 1.53
APEX1-204ENST00000553368 FYCO1Q9BQS8 1478 aa24.59■■□□□ 1.53
APEX1-204ENST00000553368 ABCA6Q8N139 1617 aa24.59■■□□□ 1.53
APEX1-204ENST00000553368 MYT1LQ9UL68 1186 aa24.58■■□□□ 1.53
APEX1-204ENST00000553368 PREX1Q8TCU6 1659 aa24.58■■□□□ 1.53
APEX1-204ENST00000553368 AGLP35573 1532 aa24.57■■□□□ 1.52
APEX1-204ENST00000553368 ITSN2Q9NZM3 1697 aa24.57■■□□□ 1.52
APEX1-204ENST00000553368 CDC42BPAQ5VT25 1732 aa24.56■■□□□ 1.52
APEX1-204ENST00000553368 SETD1BQ9UPS6 1966 aaKnown RBP24.53■■□□□ 1.52
APEX1-204ENST00000553368 KIDINS220Q9ULH0 1771 aa24.52■■□□□ 1.52
APEX1-204ENST00000553368 CERKQ8TCT0 537 aa24.49■■□□□ 1.51
APEX1-204ENST00000553368 GPATCH8Q9UKJ3 1502 aaKnown RBP24.49■■□□□ 1.51
APEX1-204ENST00000553368 UHRF1BP1Q6BDS2 1440 aa24.48■■□□□ 1.51
APEX1-204ENST00000553368 C3P01024 1663 aa24.47■■□□□ 1.51
APEX1-204ENST00000553368 SAMD9LQ8IVG5 1584 aa24.47■■□□□ 1.51
APEX1-204ENST00000553368 STRCQ7RTU9 1775 aa24.46■■□□□ 1.51
APEX1-204ENST00000553368 ZNF777Q9ULD5 760 aaPredicted RBP24.44■■□□□ 1.5
APEX1-204ENST00000553368 DMRT2Q9Y5R5 561 aa24.43■■□□□ 1.5
APEX1-204ENST00000553368 SYCP2Q9BX26 1530 aa24.42■■□□□ 1.5
APEX1-204ENST00000553368 CNTLNQ9NXG0 1405 aa24.42■■□□□ 1.5
APEX1-204ENST00000553368 KIAA1107Q9UPP5 1409 aa24.42■■□□□ 1.5
APEX1-204ENST00000553368 HNRNPMP52272 730 aaKnown RBP eCLIP24.41■■□□□ 1.5
APEX1-204ENST00000553368 ESF1Q9H501 851 aaKnown RBP24.41■■□□□ 1.5
APEX1-204ENST00000553368 SPAG9O60271 1321 aaKnown RBP24.4■■□□□ 1.5
APEX1-204ENST00000553368 PLEKHH2Q8IVE3 1493 aa24.38■■□□□ 1.49
APEX1-204ENST00000553368 CFDP1Q9UEE9 299 aaPredicted RBP24.37■■□□□ 1.49
APEX1-204ENST00000553368 CCNB3Q8WWL7 1395 aa24.36■■□□□ 1.49
APEX1-204ENST00000553368 PTPRTO14522 1441 aa24.35■■□□□ 1.49
APEX1-204ENST00000553368 ATP7AQ04656 1500 aa24.35■■□□□ 1.49
APEX1-204ENST00000553368 MROH2AA6NES4 1674 aa24.34■■□□□ 1.49
APEX1-204ENST00000553368 MTUS2Q5JR59 1369 aa24.34■■□□□ 1.49
APEX1-204ENST00000553368 INO80Q9ULG1 1556 aaPredicted RBP24.33■■□□□ 1.49
APEX1-204ENST00000553368 NPATQ14207 1427 aa24.32■■□□□ 1.48
APEX1-204ENST00000553368 PLXNC1O60486 1568 aa24.32■■□□□ 1.48
APEX1-204ENST00000553368 ZMYM3Q14202 1370 aa24.31■■□□□ 1.48
APEX1-204ENST00000553368 SUPT6HQ7KZ85 1726 aaKnown RBP24.31■■□□□ 1.48
APEX1-204ENST00000553368 A2MP01023 1474 aa24.31■■□□□ 1.48
APEX1-204ENST00000553368 TIAM1Q13009 1591 aa24.28■■□□□ 1.48
APEX1-204ENST00000553368 NCOA1Q15788 1441 aa24.27■■□□□ 1.48
APEX1-204ENST00000553368 EHBP1L1Q8N3D4 1523 aa24.26■■□□□ 1.47
APEX1-204ENST00000553368 MBD5Q9P267 1494 aa24.26■■□□□ 1.47
APEX1-204ENST00000553368 ZNF644Q9H582 1327 aaPredicted RBP24.25■■□□□ 1.47
APEX1-204ENST00000553368 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
APEX1-204ENST00000553368 CLTCQ00610 1675 aaKnown RBP24.23■■□□□ 1.47
APEX1-204ENST00000553368 PPP6R1Q9UPN7 881 aa24.22■■□□□ 1.47
APEX1-204ENST00000553368 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
APEX1-204ENST00000553368 LTBP4Q8N2S1 1624 aa24.21■■□□□ 1.47
APEX1-204ENST00000553368 RTEL1-TNFRSF6BF6WH68 1400 aa24.21■■□□□ 1.47
APEX1-204ENST00000553368 CAMSAP1Q5T5Y3 1602 aa24.21■■□□□ 1.47
APEX1-204ENST00000553368 GGT6Q6P531 493 aa24.2■■□□□ 1.46
APEX1-204ENST00000553368 PTPRKQ15262 1439 aa24.19■■□□□ 1.46
APEX1-204ENST00000553368 DHX29Q7Z478 1369 aaKnown RBP24.16■■□□□ 1.46
APEX1-204ENST00000553368 ZNF142P52746 1687 aaPredicted RBP24.15■■□□□ 1.46
APEX1-204ENST00000553368 IQSEC2Q5JU85 1478 aa24.14■■□□□ 1.46
APEX1-204ENST00000553368 MYO3AQ8NEV4 1616 aa24.14■■□□□ 1.46
APEX1-204ENST00000553368 PLA2R1Q13018 1463 aa24.13■■□□□ 1.45
APEX1-204ENST00000553368 NCKAP5LQ9HCH0 1330 aa24.12■■□□□ 1.45
APEX1-204ENST00000553368 NCOA2Q15596 1464 aa24.12■■□□□ 1.45
APEX1-204ENST00000553368 CEP170BQ9Y4F5 1589 aaPredicted RBP24.12■■□□□ 1.45
APEX1-204ENST00000553368 PKD2Q13563 968 aa24.1■■□□□ 1.45
APEX1-204ENST00000553368 RSPH4AQ5TD94 716 aa24.1■■□□□ 1.45
APEX1-204ENST00000553368 CCDC141Q6ZP82 1450 aa24.1■■□□□ 1.45
APEX1-204ENST00000553368 TCOF1Q13428 1488 aaKnown RBP24.09■■□□□ 1.45
APEX1-204ENST00000553368 CAMSAP2Q08AD1 1489 aa24.08■■□□□ 1.45
APEX1-204ENST00000553368 KIF3BO15066 747 aa24.04■■□□□ 1.44
APEX1-204ENST00000553368 A2ML1A8K2U0 1454 aa24.04■■□□□ 1.44
APEX1-204ENST00000553368 FAM135AQ9P2D6 1515 aa24.04■■□□□ 1.44
APEX1-204ENST00000553368 ZNF335Q9H4Z2 1342 aaPredicted RBP24.03■■□□□ 1.44
APEX1-204ENST00000553368 ARHGEF5Q12774 1597 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms