RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 IER5LQ5T953 404 aa12.55□□□□□ -0.4
PRKCH-204ENST00000553265 MICALL2Q8IY33 904 aa12.55□□□□□ -0.4
PRKCH-204ENST00000553265 E2F4Q16254 413 aa12.54□□□□□ -0.4
PRKCH-204ENST00000553265 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
PRKCH-204ENST00000553265 OCEL1Q9H607 264 aa12.54□□□□□ -0.4
PRKCH-204ENST00000553265 PLCG2P16885 1265 aa12.53□□□□□ -0.4
PRKCH-204ENST00000553265 MFSD10Q14728 455 aa12.53□□□□□ -0.4
PRKCH-204ENST00000553265 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
PRKCH-204ENST00000553265 COLQQ9Y215 455 aaPredicted RBP12.5□□□□□ -0.41
PRKCH-204ENST00000553265 SHROOM4Q9ULL8 1493 aa12.5□□□□□ -0.41
PRKCH-204ENST00000553265 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
PRKCH-204ENST00000553265 SEC24BO95487 1268 aa12.48□□□□□ -0.41
PRKCH-204ENST00000553265 G3V3G9 751 aa12.46□□□□□ -0.41
PRKCH-204ENST00000553265 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
PRKCH-204ENST00000553265 PPP1R15BQ5SWA1 713 aa12.46□□□□□ -0.41
PRKCH-204ENST00000553265 SP7Q8TDD2 431 aaPredicted RBP12.46□□□□□ -0.41
PRKCH-204ENST00000553265 ARHGEF1Q92888 912 aaKnown RBP12.45□□□□□ -0.42
PRKCH-204ENST00000553265 GPHNQ9NQX3 736 aaPredicted RBP12.45□□□□□ -0.42
PRKCH-204ENST00000553265 POTEFA5A3E0 1075 aa12.44□□□□□ -0.42
PRKCH-204ENST00000553265 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
PRKCH-204ENST00000553265 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
PRKCH-204ENST00000553265 SCRIBQ14160 1630 aa12.42□□□□□ -0.42
PRKCH-204ENST00000553265 DSG2Q14126 1118 aa12.42□□□□□ -0.42
PRKCH-204ENST00000553265 TMC2Q8TDI7 906 aa12.42□□□□□ -0.42
PRKCH-204ENST00000553265 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
PRKCH-204ENST00000553265 CAMK2BQ13554 666 aa12.4□□□□□ -0.42
PRKCH-204ENST00000553265 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
PRKCH-204ENST00000553265 C2orf72A6NCS6 295 aa12.39□□□□□ -0.43
PRKCH-204ENST00000553265 SEMA3EO15041 775 aa12.39□□□□□ -0.43
PRKCH-204ENST00000553265 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
PRKCH-204ENST00000553265 C7P10643 843 aa12.37□□□□□ -0.43
PRKCH-204ENST00000553265 TMEM92Q6UXU6 159 aa12.37□□□□□ -0.43
PRKCH-204ENST00000553265 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
PRKCH-204ENST00000553265 FOXK1P85037 733 aa12.35□□□□□ -0.43
PRKCH-204ENST00000553265 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
PRKCH-204ENST00000553265 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
PRKCH-204ENST00000553265 PLPP6Q8IY26 295 aa12.34□□□□□ -0.43
PRKCH-204ENST00000553265 KIF3CO14782 793 aa12.33□□□□□ -0.44
PRKCH-204ENST00000553265 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.44
PRKCH-204ENST00000553265 DPYSL4O14531 572 aa12.32□□□□□ -0.44
PRKCH-204ENST00000553265 TESPA1A2RU30 521 aaPredicted RBP12.31□□□□□ -0.44
PRKCH-204ENST00000553265 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
PRKCH-204ENST00000553265 ARIH1Q9Y4X5 557 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-204ENST00000553265 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
PRKCH-204ENST00000553265 TULP1O00294 542 aaPredicted RBP12.26□□□□□ -0.45
PRKCH-204ENST00000553265 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
PRKCH-204ENST00000553265 MLLT3P42568 568 aaPredicted RBP12.24□□□□□ -0.45
PRKCH-204ENST00000553265 PDIA6Q15084 440 aa12.2□□□□□ -0.46
PRKCH-204ENST00000553265 MAP3K9P80192 1104 aa12.17□□□□□ -0.46
PRKCH-204ENST00000553265 SMYD5Q6GMV2 418 aa12.17□□□□□ -0.46
PRKCH-204ENST00000553265 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.16□□□□□ -0.46
PRKCH-204ENST00000553265 SPDYE16A6NNV3 312 aaPredicted RBP12.15□□□□□ -0.46
PRKCH-204ENST00000553265 RBM26Q5T8P6 1007 aaKnown RBP12.15□□□□□ -0.46
PRKCH-204ENST00000553265 ZC3H15Q8WU90 426 aaKnown RBP12.15□□□□□ -0.46
PRKCH-204ENST00000553265 OXER1Q8TDS5 423 aa12.14□□□□□ -0.47
PRKCH-204ENST00000553265 POTEJP0CG39 1038 aa12.11□□□□□ -0.47
PRKCH-204ENST00000553265 GRXCR2A6NFK2 248 aa12.1□□□□□ -0.47
PRKCH-204ENST00000553265 POTEB2H3BUK9 544 aa12.1□□□□□ -0.47
PRKCH-204ENST00000553265 GPIHBP1Q8IV16 184 aa12.07□□□□□ -0.48
PRKCH-204ENST00000553265 EVI5O60447 810 aa12.06□□□□□ -0.48
PRKCH-204ENST00000553265 DDX12PQ92771 950 aa12.06□□□□□ -0.48
PRKCH-204ENST00000553265 PTCD2Q8WV60 388 aaKnown RBP12.04□□□□□ -0.48
PRKCH-204ENST00000553265 SLC24A3Q9HC58 644 aa12.04□□□□□ -0.48
PRKCH-204ENST00000553265 TBC1D12O60347 775 aa12.03□□□□□ -0.48
PRKCH-204ENST00000553265 SLC34A2O95436 690 aa12.01□□□□□ -0.49
PRKCH-204ENST00000553265 ZMYND10O75800 440 aa12□□□□□ -0.49
PRKCH-204ENST00000553265 SLAIN1Q8ND83 568 aa11.99□□□□□ -0.49
PRKCH-204ENST00000553265 PCDHGA4Q9Y5G9 962 aa11.99□□□□□ -0.49
PRKCH-204ENST00000553265 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
PRKCH-204ENST00000553265 OSBPP22059 807 aa11.98□□□□□ -0.49
PRKCH-204ENST00000553265 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
PRKCH-204ENST00000553265 PTGER2P43116 358 aa11.97□□□□□ -0.49
PRKCH-204ENST00000553265 NUTM2FA1L443 756 aa11.96□□□□□ -0.49
PRKCH-204ENST00000553265 GPR37O15354 613 aa11.95□□□□□ -0.5
PRKCH-204ENST00000553265 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
PRKCH-204ENST00000553265 SCUBE2Q9NQ36 999 aa11.95□□□□□ -0.5
PRKCH-204ENST00000553265 KHSRPQ92945 711 aaKnown RBP eCLIP11.93□□□□□ -0.5
PRKCH-204ENST00000553265 HOXB3P14651 431 aaPredicted RBP11.91□□□□□ -0.5
PRKCH-204ENST00000553265 ANO8Q9HCE9 1232 aaPredicted RBP11.91□□□□□ -0.5
PRKCH-204ENST00000553265 KRI1Q8N9T8 703 aaKnown RBP11.9□□□□□ -0.5
PRKCH-204ENST00000553265 NUDT7P0C024 238 aa11.89□□□□□ -0.51
PRKCH-204ENST00000553265 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
PRKCH-204ENST00000553265 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
PRKCH-204ENST00000553265 DOK7Q18PE1 504 aa11.88□□□□□ -0.51
PRKCH-204ENST00000553265 ARSIQ5FYB1 569 aa11.88□□□□□ -0.51
PRKCH-204ENST00000553265 RBM33Q96EV2 1170 aaKnown RBP11.88□□□□□ -0.51
PRKCH-204ENST00000553265 CDHR5Q9HBB8 845 aa11.88□□□□□ -0.51
PRKCH-204ENST00000553265 PCDHGA10Q9Y5H3 936 aa11.87□□□□□ -0.51
PRKCH-204ENST00000553265 NCAPD3P42695 1498 aa11.87□□□□□ -0.51
PRKCH-204ENST00000553265 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
PRKCH-204ENST00000553265 PHF14O94880 888 aa11.86□□□□□ -0.51
PRKCH-204ENST00000553265 NEUROD2Q15784 382 aa11.86□□□□□ -0.51
PRKCH-204ENST00000553265 CUX2O14529 1486 aa11.85□□□□□ -0.51
PRKCH-204ENST00000553265 EN1Q05925 392 aaPredicted RBP11.85□□□□□ -0.51
PRKCH-204ENST00000553265 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
PRKCH-204ENST00000553265 HMGXB3Q12766 1538 aa11.85□□□□□ -0.51
PRKCH-204ENST00000553265 MAP3K7O43318 606 aa11.84□□□□□ -0.51
PRKCH-204ENST00000553265 ATAD2BQ9ULI0 1458 aa11.83□□□□□ -0.52
PRKCH-204ENST00000553265 FCHSD2O94868 740 aa11.83□□□□□ -0.52
PRKCH-204ENST00000553265 FECHP22830 423 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms