RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ZNF777Q9ULD5 760 aaPredicted RBP17.29■□□□□ 0.36
HDAC7-230ENST00000552960 PTPN23Q9H3S7 1636 aa17.28■□□□□ 0.36
HDAC7-230ENST00000552960 ATP10BO94823 1461 aa17.26■□□□□ 0.35
HDAC7-230ENST00000552960 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.353e-6■□□□□ 11.1
HDAC7-230ENST00000552960 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-230ENST00000552960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.353e-16■□□□□ 8.2
HDAC7-230ENST00000552960 KIF14Q15058 1648 aa17.24■□□□□ 0.35
HDAC7-230ENST00000552960 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
HDAC7-230ENST00000552960 ABCA8O94911 1581 aa17.23■□□□□ 0.35
HDAC7-230ENST00000552960 TROQ12816 1431 aaPredicted RBP17.22■□□□□ 0.35
HDAC7-230ENST00000552960 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
HDAC7-230ENST00000552960 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
HDAC7-230ENST00000552960 CCER2I3L3R5 266 aa17.21■□□□□ 0.35
HDAC7-230ENST00000552960 NAIPQ13075 1403 aa17.21■□□□□ 0.35
HDAC7-230ENST00000552960 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.34
HDAC7-230ENST00000552960 HFM1A2PYH4 1435 aa17.18■□□□□ 0.34
HDAC7-230ENST00000552960 TCOF1Q13428 1488 aaKnown RBP17.18■□□□□ 0.34
HDAC7-230ENST00000552960 KDM6BO15054 1643 aa17.17■□□□□ 0.34
HDAC7-230ENST00000552960 MSH5O43196 834 aa17.17■□□□□ 0.34
HDAC7-230ENST00000552960 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
HDAC7-230ENST00000552960 MIA2Q96PC5 1412 aa17.15■□□□□ 0.34
HDAC7-230ENST00000552960 SHROOM2Q13796 1616 aa17.15■□□□□ 0.34
HDAC7-230ENST00000552960 FOXD1Q16676 465 aa17.15■□□□□ 0.34
HDAC7-230ENST00000552960 UACAQ9BZF9 1416 aa17.15■□□□□ 0.34
HDAC7-230ENST00000552960 ABCC5O15440 1437 aa17.14■□□□□ 0.33
HDAC7-230ENST00000552960 CNGB1Q14028 1251 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-230ENST00000552960 CLASP1Q7Z460 1538 aa17.13■□□□□ 0.33
HDAC7-230ENST00000552960 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
HDAC7-230ENST00000552960 DAPK1P53355 1430 aa17.12■□□□□ 0.33
HDAC7-230ENST00000552960 HNRNPMP52272 730 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■■■□□ 16.7
HDAC7-230ENST00000552960 CAMSAP2Q08AD1 1489 aa17.1■□□□□ 0.33
HDAC7-230ENST00000552960 ABCC10Q5T3U5 1492 aa17.07■□□□□ 0.32
HDAC7-230ENST00000552960 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
HDAC7-230ENST00000552960 DENND4BO75064 1496 aaPredicted RBP17.04■□□□□ 0.32
HDAC7-230ENST00000552960 ADCY10Q96PN6 1610 aa17.02■□□□□ 0.32
HDAC7-230ENST00000552960 ABCC2Q92887 1545 aa17.02■□□□□ 0.32
HDAC7-230ENST00000552960 CDC42BPAQ5VT25 1732 aa17.02■□□□□ 0.32
HDAC7-230ENST00000552960 DNMT1P26358 1616 aaKnown RBP17.02■□□□□ 0.32
HDAC7-230ENST00000552960 B4GALNT3Q6L9W6 998 aa17.02■□□□□ 0.31
HDAC7-230ENST00000552960 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
HDAC7-230ENST00000552960 MPHOSPH9Q99550 1183 aa17.01■□□□□ 0.31
HDAC7-230ENST00000552960 CCDC184Q52MB2 194 aa17■□□□□ 0.31
HDAC7-230ENST00000552960 HSPA5P11021 654 aaKnown RBP17■□□□□ 0.31
HDAC7-230ENST00000552960 AKNAQ7Z591 1439 aa17■□□□□ 0.31
HDAC7-230ENST00000552960 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
HDAC7-230ENST00000552960 TTC37Q6PGP7 1564 aa16.98■□□□□ 0.31
HDAC7-230ENST00000552960 NCOA1Q15788 1441 aa16.98■□□□□ 0.31
HDAC7-230ENST00000552960 GCC2Q8IWJ2 1684 aa16.96■□□□□ 0.31
HDAC7-230ENST00000552960 ITSN2Q9NZM3 1697 aa16.96■□□□□ 0.31
HDAC7-230ENST00000552960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.96■□□□□ 0.314e-6■■■□□ 19
HDAC7-230ENST00000552960 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.3
HDAC7-230ENST00000552960 MRS2Q9HD23 443 aa16.95■□□□□ 0.3
HDAC7-230ENST00000552960 POLR3GLQ9BT43 218 aa16.95■□□□□ 0.3
HDAC7-230ENST00000552960 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
HDAC7-230ENST00000552960 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
HDAC7-230ENST00000552960 SLC4A1APQ9BWU0 796 aaKnown RBP16.94■□□□□ 0.3
HDAC7-230ENST00000552960 PPP4R2Q9NY27 417 aa16.94■□□□□ 0.3
HDAC7-230ENST00000552960 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
HDAC7-230ENST00000552960 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.35e-7■■□□□ 11.4
HDAC7-230ENST00000552960 CDC42BPBQ9Y5S2 1711 aa16.93■□□□□ 0.3
HDAC7-230ENST00000552960 TSPY4P0CV99 314 aa16.92■□□□□ 0.3
HDAC7-230ENST00000552960 TSPY10P0CW01 314 aa16.92■□□□□ 0.3
HDAC7-230ENST00000552960 SAMD9LQ8IVG5 1584 aa16.92■□□□□ 0.3
HDAC7-230ENST00000552960 NBR1Q14596 966 aa16.92■□□□□ 0.3
HDAC7-230ENST00000552960 MBD5Q9P267 1494 aa16.92■□□□□ 0.3
HDAC7-230ENST00000552960 C9orf84Q5VXU9 1444 aa16.92■□□□□ 0.3
HDAC7-230ENST00000552960 ARHGAP5Q13017 1502 aa16.91■□□□□ 0.3
HDAC7-230ENST00000552960 KDM5BQ9UGL1 1544 aa16.9■□□□□ 0.3
HDAC7-230ENST00000552960 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.29
HDAC7-230ENST00000552960 SYCP2Q9BX26 1530 aa16.88■□□□□ 0.29
HDAC7-230ENST00000552960 ARHGEF12Q9NZN5 1544 aa16.87■□□□□ 0.29
HDAC7-230ENST00000552960 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
HDAC7-230ENST00000552960 PREX2Q70Z35 1606 aa16.86■□□□□ 0.29
HDAC7-230ENST00000552960 UHRF1BP1LA0JNW5 1464 aa16.86■□□□□ 0.29
HDAC7-230ENST00000552960 C11orf95C9JLR9 678 aaPredicted RBP16.85■□□□□ 0.29
HDAC7-230ENST00000552960 KIF15Q9NS87 1388 aa16.85■□□□□ 0.29
HDAC7-230ENST00000552960 DEKP35659 375 aaKnown RBP16.85■□□□□ 0.29
HDAC7-230ENST00000552960 CROCC2H7BZ55 1655 aa16.85■□□□□ 0.29
HDAC7-230ENST00000552960 PKD2Q13563 968 aa16.85■□□□□ 0.29
HDAC7-230ENST00000552960 PZPP20742 1482 aa16.84■□□□□ 0.29
HDAC7-230ENST00000552960 AFAP1Q8N556 730 aa16.84■□□□□ 0.29
HDAC7-230ENST00000552960 L3MBTL2Q969R5 705 aa16.84■□□□□ 0.29
HDAC7-230ENST00000552960 PRKRIP1Q9H875 184 aaPredicted RBP16.84■□□□□ 0.29
HDAC7-230ENST00000552960 ADGRL2O95490 1459 aa16.84■□□□□ 0.29
HDAC7-230ENST00000552960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.28
HDAC7-230ENST00000552960 NUP155O75694 1391 aa16.82■□□□□ 0.28
HDAC7-230ENST00000552960 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
HDAC7-230ENST00000552960 CCDC141Q6ZP82 1450 aa16.81■□□□□ 0.28
HDAC7-230ENST00000552960 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
HDAC7-230ENST00000552960 PLCH2O75038 1416 aa16.81■□□□□ 0.28
HDAC7-230ENST00000552960 TRAPPC8Q9Y2L5 1435 aa16.8■□□□□ 0.28
HDAC7-230ENST00000552960 ADGBQ8N7X0 1667 aa16.8■□□□□ 0.28
HDAC7-230ENST00000552960 ASXL2Q76L83 1435 aa16.8■□□□□ 0.28
HDAC7-230ENST00000552960 EFCAB2Q5VUJ9 269 aa16.79■□□□□ 0.28
HDAC7-230ENST00000552960 CYB5RLQ6IPT4 315 aa16.79■□□□□ 0.28
HDAC7-230ENST00000552960 WDR7Q9Y4E6 1490 aa16.78■□□□□ 0.28
HDAC7-230ENST00000552960 MYO5CQ9NQX4 1742 aa16.78■□□□□ 0.28
HDAC7-230ENST00000552960 ERICH6BQ5W0A0 696 aa16.77■□□□□ 0.28
HDAC7-230ENST00000552960 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.27
HDAC7-230ENST00000552960 SHANK2Q9UPX8 1470 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms