RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 TROQ12816 1431 aaPredicted RBP27.54■■■□□ 2
CDK4-208ENST00000551706 ILDR2Q71H61 639 aa27.54■■■□□ 2
CDK4-208ENST00000551706 DISP3Q9P2K9 1392 aa27.54■■■□□ 2
CDK4-208ENST00000551706 LRRIQ1Q96JM4 1722 aa27.53■■■□□ 2
CDK4-208ENST00000551706 POGZQ7Z3K3 1410 aa27.51■■□□□ 1.99
CDK4-208ENST00000551706 VPS8Q8N3P4 1428 aa27.51■■□□□ 1.99
CDK4-208ENST00000551706 DENND4BO75064 1496 aaPredicted RBP27.51■■□□□ 1.99
CDK4-208ENST00000551706 FANCAO15360 1455 aa27.5■■□□□ 1.99
CDK4-208ENST00000551706 RICTORQ6R327 1708 aa27.49■■□□□ 1.99
CDK4-208ENST00000551706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.48■■□□□ 1.992e-6■■■■■ 31.3
CDK4-208ENST00000551706 AKNAQ7Z591 1439 aa27.46■■□□□ 1.99
CDK4-208ENST00000551706 KIF14Q15058 1648 aa27.45■■□□□ 1.99
CDK4-208ENST00000551706 TTC37Q6PGP7 1564 aa27.41■■□□□ 1.98
CDK4-208ENST00000551706 CFAP74Q9C0B2 1584 aa27.39■■□□□ 1.98
CDK4-208ENST00000551706 SIGLEC1Q9BZZ2 1709 aa27.39■■□□□ 1.98
CDK4-208ENST00000551706 ZMYM4Q5VZL5 1548 aa27.39■■□□□ 1.98
CDK4-208ENST00000551706 ZFYVE16Q7Z3T8 1539 aa27.39■■□□□ 1.98
CDK4-208ENST00000551706 MLECQ14165 292 aa27.38■■□□□ 1.97
CDK4-208ENST00000551706 MTUS2Q5JR59 1369 aa27.37■■□□□ 1.97
CDK4-208ENST00000551706 PLCH2O75038 1416 aa27.37■■□□□ 1.97
CDK4-208ENST00000551706 YEATS2Q9ULM3 1422 aa27.37■■□□□ 1.97
CDK4-208ENST00000551706 FER1L4A9Z1Z3 1794 aa27.37■■□□□ 1.97
CDK4-208ENST00000551706 MAGI2Q86UL8 1455 aa27.34■■□□□ 1.97
CDK4-208ENST00000551706 DMRT2Q9Y5R5 561 aa27.31■■□□□ 1.96
CDK4-208ENST00000551706 EHBP1L1Q8N3D4 1523 aa27.31■■□□□ 1.96
CDK4-208ENST00000551706 PREX1Q8TCU6 1659 aa27.3■■□□□ 1.96
CDK4-208ENST00000551706 EFCAB2Q5VUJ9 269 aa27.29■■□□□ 1.96
CDK4-208ENST00000551706 MAP3K1Q13233 1512 aa27.29■■□□□ 1.96
CDK4-208ENST00000551706 TIAM1Q13009 1591 aa27.29■■□□□ 1.96
CDK4-208ENST00000551706 MYO5CQ9NQX4 1742 aa27.29■■□□□ 1.96
CDK4-208ENST00000551706 SPATA31D1Q6ZQQ2 1576 aa27.28■■□□□ 1.96
CDK4-208ENST00000551706 ARHGEF12Q9NZN5 1544 aa27.25■■□□□ 1.95
CDK4-208ENST00000551706 APLP2Q06481 763 aa27.24■■□□□ 1.95
CDK4-208ENST00000551706 STRCQ7RTU9 1775 aa27.23■■□□□ 1.95
CDK4-208ENST00000551706 ARHGAP5Q13017 1502 aa27.23■■□□□ 1.95
CDK4-208ENST00000551706 CEBPAP49715 358 aaPredicted RBP27.21■■□□□ 1.95
CDK4-208ENST00000551706 LRRC9Q6ZRR7 1453 aa27.2■■□□□ 1.95
CDK4-208ENST00000551706 PREX2Q70Z35 1606 aa27.19■■□□□ 1.94
CDK4-208ENST00000551706 SCAPERQ9BY12 1400 aa27.19■■□□□ 1.94
CDK4-208ENST00000551706 CCNB3Q8WWL7 1395 aa27.19■■□□□ 1.94
CDK4-208ENST00000551706 ATP10AO60312 1499 aa27.19■■□□□ 1.94
CDK4-208ENST00000551706 GPATCH8Q9UKJ3 1502 aaKnown RBP27.18■■□□□ 1.94
CDK4-208ENST00000551706 C9orf84Q5VXU9 1444 aa27.17■■□□□ 1.94
CDK4-208ENST00000551706 UHRF1BP1Q6BDS2 1440 aa27.16■■□□□ 1.94
CDK4-208ENST00000551706 CDC42BPBQ9Y5S2 1711 aa27.14■■□□□ 1.94
CDK4-208ENST00000551706 CDC42BPAQ5VT25 1732 aa27.13■■□□□ 1.93
CDK4-208ENST00000551706 SUPT6HQ7KZ85 1726 aaKnown RBP27.13■■□□□ 1.93
CDK4-208ENST00000551706 NCOA2Q15596 1464 aa27.13■■□□□ 1.93
CDK4-208ENST00000551706 KANK4Q5T7N3 995 aaPredicted RBP27.12■■□□□ 1.93
CDK4-208ENST00000551706 CFDP1Q9UEE9 299 aaPredicted RBP27.12■■□□□ 1.93
CDK4-208ENST00000551706 PTPRTO14522 1441 aa27.11■■□□□ 1.93
CDK4-208ENST00000551706 SETD1BQ9UPS6 1966 aaKnown RBP27.09■■□□□ 1.93
CDK4-208ENST00000551706 ZNF777Q9ULD5 760 aaPredicted RBP27.06■■□□□ 1.92
CDK4-208ENST00000551706 ITSN2Q9NZM3 1697 aa27.05■■□□□ 1.92
CDK4-208ENST00000551706 ZNF518AQ6AHZ1 1483 aa27.05■■□□□ 1.92
CDK4-208ENST00000551706 ABCC1P33527 1531 aa27.05■■□□□ 1.92
CDK4-208ENST00000551706 PLEKHH2Q8IVE3 1493 aa27.04■■□□□ 1.92
CDK4-208ENST00000551706 IQSEC2Q5JU85 1478 aa27.03■■□□□ 1.92
CDK4-208ENST00000551706 LTBP4Q8N2S1 1624 aa27.03■■□□□ 1.92
CDK4-208ENST00000551706 KIAA1107Q9UPP5 1409 aa27.01■■□□□ 1.91
CDK4-208ENST00000551706 SAMD9LQ8IVG5 1584 aa27.01■■□□□ 1.91
CDK4-208ENST00000551706 AFAP1Q8N556 730 aa26.98■■□□□ 1.91
CDK4-208ENST00000551706 C3P01024 1663 aa26.96■■□□□ 1.91
CDK4-208ENST00000551706 KDM5CP41229 1560 aa26.96■■□□□ 1.91
CDK4-208ENST00000551706 TRAPPC8Q9Y2L5 1435 aa26.95■■□□□ 1.9
CDK4-208ENST00000551706 SYCP2Q9BX26 1530 aa26.95■■□□□ 1.9
CDK4-208ENST00000551706 MYT1LQ9UL68 1186 aa26.94■■□□□ 1.9
CDK4-208ENST00000551706 MYOM3Q5VTT5 1437 aa26.93■■□□□ 1.9
CDK4-208ENST00000551706 HNRNPMP52272 730 aaKnown RBP eCLIP26.93■■□□□ 1.9
CDK4-208ENST00000551706 ESF1Q9H501 851 aaKnown RBP26.92■■□□□ 1.9
CDK4-208ENST00000551706 ZNF644Q9H582 1327 aaPredicted RBP26.91■■□□□ 1.9
CDK4-208ENST00000551706 MIA2Q96PC5 1412 aa26.91■■□□□ 1.9
CDK4-208ENST00000551706 REREQ9P2R6 1566 aa26.91■■□□□ 1.9
CDK4-208ENST00000551706 DIP2CQ9Y2E4 1556 aa26.91■■□□□ 1.9
CDK4-208ENST00000551706 NCOA1Q15788 1441 aa26.9■■□□□ 1.9
CDK4-208ENST00000551706 MLH3Q9UHC1 1453 aa26.9■■□□□ 1.9
CDK4-208ENST00000551706 CAMSAP2Q08AD1 1489 aa26.87■■□□□ 1.89
CDK4-208ENST00000551706 RSPH4AQ5TD94 716 aa26.87■■□□□ 1.89
CDK4-208ENST00000551706 MBD5Q9P267 1494 aa26.86■■□□□ 1.89
CDK4-208ENST00000551706 SPAG9O60271 1321 aaKnown RBP26.85■■□□□ 1.89
CDK4-208ENST00000551706 ABCA6Q8N139 1617 aa26.83■■□□□ 1.89
CDK4-208ENST00000551706 AGLP35573 1532 aa26.82■■□□□ 1.88
CDK4-208ENST00000551706 UBAP1LF5GYI3 381 aa26.82■■□□□ 1.88
CDK4-208ENST00000551706 CCDC141Q6ZP82 1450 aa26.8■■□□□ 1.88
CDK4-208ENST00000551706 CAMSAP1Q5T5Y3 1602 aa26.79■■□□□ 1.88
CDK4-208ENST00000551706 CNTLNQ9NXG0 1405 aa26.79■■□□□ 1.88
CDK4-208ENST00000551706 FGD6Q6ZV73 1430 aa26.78■■□□□ 1.88
CDK4-208ENST00000551706 ARHGEF5Q12774 1597 aa26.77■■□□□ 1.88
CDK4-208ENST00000551706 ZNF335Q9H4Z2 1342 aaPredicted RBP26.76■■□□□ 1.87
CDK4-208ENST00000551706 KIDINS220Q9ULH0 1771 aa26.76■■□□□ 1.87
CDK4-208ENST00000551706 ATP7AQ04656 1500 aa26.75■■□□□ 1.87
CDK4-208ENST00000551706 RTEL1-TNFRSF6BF6WH68 1400 aa26.75■■□□□ 1.87
CDK4-208ENST00000551706 INO80Q9ULG1 1556 aaPredicted RBP26.74■■□□□ 1.87
CDK4-208ENST00000551706 TSPY4P0CV99 314 aa26.73■■□□□ 1.87
CDK4-208ENST00000551706 TSPY10P0CW01 314 aa26.73■■□□□ 1.87
CDK4-208ENST00000551706 NPATQ14207 1427 aa26.73■■□□□ 1.87
CDK4-208ENST00000551706 PTPN23Q9H3S7 1636 aa26.72■■□□□ 1.87
CDK4-208ENST00000551706 NCKAP5LQ9HCH0 1330 aa26.72■■□□□ 1.87
CDK4-208ENST00000551706 TCOF1Q13428 1488 aaKnown RBP26.71■■□□□ 1.87
CDK4-208ENST00000551706 MROH2AA6NES4 1674 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms