RNA–Protein interactions for RNA: ENST00000551018.5

PFDN5-214, Transcript of prefoldin subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-214ENST00000551018 AKNAQ7Z591 1439 aa13.37□□□□□ -0.27
PFDN5-214ENST00000551018 DENND4BO75064 1496 aaPredicted RBP13.36□□□□□ -0.27
PFDN5-214ENST00000551018 BCORL1Q5H9F3 1711 aa13.36□□□□□ -0.27
PFDN5-214ENST00000551018 ARHGEF40Q8TER5 1519 aa13.36□□□□□ -0.27
PFDN5-214ENST00000551018 EFCAB5A4FU69 1503 aa13.35□□□□□ -0.27
PFDN5-214ENST00000551018 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
PFDN5-214ENST00000551018 RIMS1Q86UR5 1692 aaKnown RBP13.34□□□□□ -0.27
PFDN5-214ENST00000551018 RICTORQ6R327 1708 aa13.33□□□□□ -0.27
PFDN5-214ENST00000551018 YEATS2Q9ULM3 1422 aa13.33□□□□□ -0.28
PFDN5-214ENST00000551018 MLECQ14165 292 aa13.33□□□□□ -0.28
PFDN5-214ENST00000551018 CFAP74Q9C0B2 1584 aa13.32□□□□□ -0.28
PFDN5-214ENST00000551018 PCF11O94913 1555 aaKnown RBP13.31□□□□□ -0.28
PFDN5-214ENST00000551018 LMTK3Q96Q04 1460 aa13.3□□□□□ -0.28
PFDN5-214ENST00000551018 ZFYVE16Q7Z3T8 1539 aa13.3□□□□□ -0.28
PFDN5-214ENST00000551018 HSPA2P54652 639 aa13.3□□□□□ -0.28
PFDN5-214ENST00000551018 SIGLEC1Q9BZZ2 1709 aa13.3□□□□□ -0.28
PFDN5-214ENST00000551018 SCAPERQ9BY12 1400 aa13.29□□□□□ -0.28
PFDN5-214ENST00000551018 ZMYM4Q5VZL5 1548 aa13.28□□□□□ -0.28
PFDN5-214ENST00000551018 HECW1Q76N89 1606 aa13.28□□□□□ -0.28
PFDN5-214ENST00000551018 C1QBPQ07021 282 aaKnown RBP13.27□□□□□ -0.29
PFDN5-214ENST00000551018 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
PFDN5-214ENST00000551018 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
PFDN5-214ENST00000551018 PLCH2O75038 1416 aa13.26□□□□□ -0.29
PFDN5-214ENST00000551018 KIF14Q15058 1648 aa13.26□□□□□ -0.29
PFDN5-214ENST00000551018 FBXO41Q8TF61 875 aa13.26□□□□□ -0.29
PFDN5-214ENST00000551018 FMN1Q68DA7 1419 aa13.25□□□□□ -0.29
PFDN5-214ENST00000551018 MYT1LQ9UL68 1186 aa13.24□□□□□ -0.29
PFDN5-214ENST00000551018 EFCAB2Q5VUJ9 269 aa13.22□□□□□ -0.29
PFDN5-214ENST00000551018 ARHGAP5Q13017 1502 aa13.22□□□□□ -0.29
PFDN5-214ENST00000551018 FER1L4A9Z1Z3 1794 aa13.22□□□□□ -0.29
PFDN5-214ENST00000551018 MAGI2Q86UL8 1455 aa13.22□□□□□ -0.29
PFDN5-214ENST00000551018 MYO5CQ9NQX4 1742 aa13.22□□□□□ -0.29
PFDN5-214ENST00000551018 CDK11AQ9UQ88 783 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-214ENST00000551018 CEBPAP49715 358 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-214ENST00000551018 AFAP1Q8N556 730 aa13.2□□□□□ -0.3
PFDN5-214ENST00000551018 ATP10AO60312 1499 aa13.2□□□□□ -0.3
PFDN5-214ENST00000551018 TROQ12816 1431 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-214ENST00000551018 CLIP1P30622 1438 aa13.19□□□□□ -0.3
PFDN5-214ENST00000551018 C9orf84Q5VXU9 1444 aa13.19□□□□□ -0.3
PFDN5-214ENST00000551018 LRRIQ1Q96JM4 1722 aa13.19□□□□□ -0.3
PFDN5-214ENST00000551018 ARHGEF12Q9NZN5 1544 aa13.17□□□□□ -0.3
PFDN5-214ENST00000551018 ZNF518AQ6AHZ1 1483 aa13.16□□□□□ -0.3
PFDN5-214ENST00000551018 KDM5CP41229 1560 aa13.13□□□□□ -0.31
PFDN5-214ENST00000551018 DIP2CQ9Y2E4 1556 aa13.13□□□□□ -0.31
PFDN5-214ENST00000551018 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
PFDN5-214ENST00000551018 ABCA6Q8N139 1617 aa13.12□□□□□ -0.31
PFDN5-214ENST00000551018 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
PFDN5-214ENST00000551018 ZNF777Q9ULD5 760 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-214ENST00000551018 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
PFDN5-214ENST00000551018 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
PFDN5-214ENST00000551018 ABCC1P33527 1531 aa13.1□□□□□ -0.31
PFDN5-214ENST00000551018 PREX1Q8TCU6 1659 aa13.1□□□□□ -0.31
PFDN5-214ENST00000551018 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
PFDN5-214ENST00000551018 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
PFDN5-214ENST00000551018 ESF1Q9H501 851 aaKnown RBP13.08□□□□□ -0.32
PFDN5-214ENST00000551018 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
PFDN5-214ENST00000551018 UHRF1BP1Q6BDS2 1440 aa13.07□□□□□ -0.32
PFDN5-214ENST00000551018 MLH3Q9UHC1 1453 aa13.06□□□□□ -0.32
PFDN5-214ENST00000551018 FYCO1Q9BQS8 1478 aa13.05□□□□□ -0.32
PFDN5-214ENST00000551018 CDC42BPAQ5VT25 1732 aa13.05□□□□□ -0.32
PFDN5-214ENST00000551018 SYCP2Q9BX26 1530 aa13.04□□□□□ -0.32
PFDN5-214ENST00000551018 HNRNPMP52272 730 aaKnown RBP eCLIP13.04□□□□□ -0.32
PFDN5-214ENST00000551018 C3P01024 1663 aa13.04□□□□□ -0.32
PFDN5-214ENST00000551018 REREQ9P2R6 1566 aa13.03□□□□□ -0.32
PFDN5-214ENST00000551018 STRCQ7RTU9 1775 aa13.03□□□□□ -0.32
PFDN5-214ENST00000551018 KIDINS220Q9ULH0 1771 aa13.03□□□□□ -0.32
PFDN5-214ENST00000551018 SAMD9LQ8IVG5 1584 aa13.03□□□□□ -0.32
PFDN5-214ENST00000551018 SPAG9O60271 1321 aaKnown RBP13.01□□□□□ -0.33
PFDN5-214ENST00000551018 AGLP35573 1532 aa13.01□□□□□ -0.33
PFDN5-214ENST00000551018 GPATCH8Q9UKJ3 1502 aaKnown RBP13.01□□□□□ -0.33
PFDN5-214ENST00000551018 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
PFDN5-214ENST00000551018 CFDP1Q9UEE9 299 aaPredicted RBP12.99□□□□□ -0.33
PFDN5-214ENST00000551018 SUPT6HQ7KZ85 1726 aaKnown RBP12.99□□□□□ -0.33
PFDN5-214ENST00000551018 CCNB3Q8WWL7 1395 aa12.98□□□□□ -0.33
PFDN5-214ENST00000551018 MTUS2Q5JR59 1369 aa12.97□□□□□ -0.33
PFDN5-214ENST00000551018 ATP7AQ04656 1500 aa12.97□□□□□ -0.33
PFDN5-214ENST00000551018 CNTLNQ9NXG0 1405 aa12.96□□□□□ -0.33
PFDN5-214ENST00000551018 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-214ENST00000551018 GGT6Q6P531 493 aa12.95□□□□□ -0.34
PFDN5-214ENST00000551018 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
PFDN5-214ENST00000551018 CLTCQ00610 1675 aaKnown RBP12.94□□□□□ -0.34
PFDN5-214ENST00000551018 A2MP01023 1474 aa12.94□□□□□ -0.34
PFDN5-214ENST00000551018 CAMSAP1Q5T5Y3 1602 aa12.94□□□□□ -0.34
PFDN5-214ENST00000551018 PTPRTO14522 1441 aa12.94□□□□□ -0.34
PFDN5-214ENST00000551018 NCOA1Q15788 1441 aa12.94□□□□□ -0.34
PFDN5-214ENST00000551018 INO80Q9ULG1 1556 aaPredicted RBP12.94□□□□□ -0.34
PFDN5-214ENST00000551018 DISP3Q9P2K9 1392 aa12.94□□□□□ -0.34
PFDN5-214ENST00000551018 NCKAP5LQ9HCH0 1330 aa12.93□□□□□ -0.34
PFDN5-214ENST00000551018 SETD1BQ9UPS6 1966 aaKnown RBP12.93□□□□□ -0.34
PFDN5-214ENST00000551018 PLEKHH2Q8IVE3 1493 aa12.92□□□□□ -0.34
PFDN5-214ENST00000551018 TIAM1Q13009 1591 aa12.92□□□□□ -0.34
PFDN5-214ENST00000551018 PLXNC1O60486 1568 aa12.91□□□□□ -0.34
PFDN5-214ENST00000551018 KIAA1107Q9UPP5 1409 aa12.91□□□□□ -0.34
PFDN5-214ENST00000551018 MROH2AA6NES4 1674 aa12.9□□□□□ -0.34
PFDN5-214ENST00000551018 NPATQ14207 1427 aa12.9□□□□□ -0.34
PFDN5-214ENST00000551018 LTBP4Q8N2S1 1624 aa12.9□□□□□ -0.34
PFDN5-214ENST00000551018 ZNF335Q9H4Z2 1342 aaPredicted RBP12.89□□□□□ -0.35
PFDN5-214ENST00000551018 EHBP1L1Q8N3D4 1523 aa12.89□□□□□ -0.35
PFDN5-214ENST00000551018 MYO3AQ8NEV4 1616 aa12.89□□□□□ -0.35
PFDN5-214ENST00000551018 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms