RNA–Protein interactions for RNA: ENST00000550859.5

SMARCC2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-211ENST00000550859 TMC2Q8TDI7 906 aa10.91□□□□□ -0.66
SMARCC2-211ENST00000550859 SLAIN1Q8ND83 568 aa10.87□□□□□ -0.67
SMARCC2-211ENST00000550859 CADPS2Q86UW7 1296 aa10.86□□□□□ -0.67
SMARCC2-211ENST00000550859 LARP6Q9BRS8 491 aaKnown RBP10.85□□□□□ -0.67
SMARCC2-211ENST00000550859 GPHNQ9NQX3 736 aaPredicted RBP10.85□□□□□ -0.67
SMARCC2-211ENST00000550859 WDR70Q9NW82 654 aa10.85□□□□□ -0.67
SMARCC2-211ENST00000550859 OTUD5Q96G74 571 aa10.84□□□□□ -0.67
SMARCC2-211ENST00000550859 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
SMARCC2-211ENST00000550859 TMEM92Q6UXU6 159 aa10.82□□□□□ -0.68
SMARCC2-211ENST00000550859 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
SMARCC2-211ENST00000550859 CRISPLD2Q9H0B8 497 aa10.82□□□□□ -0.68
SMARCC2-211ENST00000550859 NCKAP5LQ9HCH0 1330 aa10.82□□□□□ -0.68
SMARCC2-211ENST00000550859 SLC24A1O60721 1099 aa10.81□□□□□ -0.68
SMARCC2-211ENST00000550859 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
SMARCC2-211ENST00000550859 KIF3CO14782 793 aa10.79□□□□□ -0.68
SMARCC2-211ENST00000550859 FOXK1P85037 733 aa10.77□□□□□ -0.69
SMARCC2-211ENST00000550859 SNPHO15079 494 aa10.76□□□□□ -0.69
SMARCC2-211ENST00000550859 DSG2Q14126 1118 aa10.76□□□□□ -0.69
SMARCC2-211ENST00000550859 MFSD10Q14728 455 aa10.76□□□□□ -0.69
SMARCC2-211ENST00000550859 PPP1R15BQ5SWA1 713 aa10.76□□□□□ -0.69
SMARCC2-211ENST00000550859 PLPP6Q8IY26 295 aa10.76□□□□□ -0.69
SMARCC2-211ENST00000550859 KDM2AQ9Y2K7 1162 aa10.72□□□□□ -0.69
SMARCC2-211ENST00000550859 DOK7Q18PE1 504 aa10.7□□□□□ -0.7
SMARCC2-211ENST00000550859 E2F4Q16254 413 aa10.69□□□□□ -0.7
SMARCC2-211ENST00000550859 RIMBP2O15034 1052 aa10.68□□□□□ -0.7
SMARCC2-211ENST00000550859 ZNF710Q8N1W2 664 aa10.67□□□□□ -0.7
SMARCC2-211ENST00000550859 TBC1D12O60347 775 aa10.66□□□□□ -0.7
SMARCC2-211ENST00000550859 SLC34A2O95436 690 aa10.64□□□□□ -0.71
SMARCC2-211ENST00000550859 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
SMARCC2-211ENST00000550859 CAMK2BQ13554 666 aa10.63□□□□□ -0.71
SMARCC2-211ENST00000550859 HOXB3P14651 431 aaPredicted RBP10.62□□□□□ -0.71
SMARCC2-211ENST00000550859 ZSWIM6Q9HCJ5 1215 aa10.62□□□□□ -0.71
SMARCC2-211ENST00000550859 MAP3K9P80192 1104 aa10.61□□□□□ -0.71
SMARCC2-211ENST00000550859 PTCD2Q8WV60 388 aaKnown RBP10.6□□□□□ -0.71
SMARCC2-211ENST00000550859 UPF1Q92900 1129 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMARCC2-211ENST00000550859 FAM163AQ96GL9 167 aaPredicted RBP10.6□□□□□ -0.71
SMARCC2-211ENST00000550859 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
SMARCC2-211ENST00000550859 ARHGEF1Q92888 912 aaKnown RBP10.58□□□□□ -0.72
SMARCC2-211ENST00000550859 EMILIN3Q9NT22 766 aa10.58□□□□□ -0.72
SMARCC2-211ENST00000550859 PCDHGA4Q9Y5G9 962 aa10.57□□□□□ -0.72
SMARCC2-211ENST00000550859 ARSIQ5FYB1 569 aa10.56□□□□□ -0.72
SMARCC2-211ENST00000550859 ZNF316A6NFI3 1004 aaPredicted RBP10.55□□□□□ -0.72
SMARCC2-211ENST00000550859 KCNV2Q8TDN2 545 aa10.55□□□□□ -0.72
SMARCC2-211ENST00000550859 DPYSL4O14531 572 aa10.54□□□□□ -0.72
SMARCC2-211ENST00000550859 ARIH1Q9Y4X5 557 aaPredicted RBP10.54□□□□□ -0.72
SMARCC2-211ENST00000550859 ST18O60284 1047 aa10.53□□□□□ -0.72
SMARCC2-211ENST00000550859 GPR153Q6NV75 609 aa10.53□□□□□ -0.72
SMARCC2-211ENST00000550859 SPDYE16A6NNV3 312 aaPredicted RBP10.51□□□□□ -0.73
SMARCC2-211ENST00000550859 EVI5O60447 810 aa10.51□□□□□ -0.73
SMARCC2-211ENST00000550859 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
SMARCC2-211ENST00000550859 NUDT7P0C024 238 aa10.49□□□□□ -0.73
SMARCC2-211ENST00000550859 KHSRPQ92945 711 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMARCC2-211ENST00000550859 EMP3P54852 163 aa10.45□□□□□ -0.74
SMARCC2-211ENST00000550859 PDIA6Q15084 440 aa10.45□□□□□ -0.74
SMARCC2-211ENST00000550859 ANO8Q9HCE9 1232 aaPredicted RBP10.45□□□□□ -0.74
SMARCC2-211ENST00000550859 NBR1Q14596 966 aa10.44□□□□□ -0.74
SMARCC2-211ENST00000550859 ERBB3P21860 1342 aa10.43□□□□□ -0.74
SMARCC2-211ENST00000550859 MARVELD3Q96A59 401 aa10.43□□□□□ -0.74
SMARCC2-211ENST00000550859 PSDA5PKW4 1024 aaPredicted RBP10.42□□□□□ -0.74
SMARCC2-211ENST00000550859 KDM4FA0A1W2PPD8 638 aa10.41□□□□□ -0.74
SMARCC2-211ENST00000550859 LHX6Q9UPM6 363 aa10.41□□□□□ -0.74
SMARCC2-211ENST00000550859 PTGER2P43116 358 aa10.39□□□□□ -0.75
SMARCC2-211ENST00000550859 FAM205CA6NFA0 338 aa10.38□□□□□ -0.75
SMARCC2-211ENST00000550859 SEMA3EO15041 775 aa10.38□□□□□ -0.75
SMARCC2-211ENST00000550859 LCE2DQ5TA82 110 aaPredicted RBP10.38□□□□□ -0.75
SMARCC2-211ENST00000550859 SMYD5Q6GMV2 418 aa10.38□□□□□ -0.75
SMARCC2-211ENST00000550859 GRXCR2A6NFK2 248 aa10.37□□□□□ -0.75
SMARCC2-211ENST00000550859 TULP1O00294 542 aaPredicted RBP10.37□□□□□ -0.75
SMARCC2-211ENST00000550859 PPP4R3BQ5MIZ7 849 aa10.37□□□□□ -0.75
SMARCC2-211ENST00000550859 ZNF454Q8N9F8 522 aa10.37□□□□□ -0.75
SMARCC2-211ENST00000550859 DDX12PQ92771 950 aa10.37□□□□□ -0.75
SMARCC2-211ENST00000550859 BCANQ96GW7 911 aa10.37□□□□□ -0.75
SMARCC2-211ENST00000550859 PHF14O94880 888 aa10.36□□□□□ -0.75
SMARCC2-211ENST00000550859 JPH4Q96JJ6 628 aa10.36□□□□□ -0.75
SMARCC2-211ENST00000550859 VARS2Q5ST30 1063 aaKnown RBP10.35□□□□□ -0.75
SMARCC2-211ENST00000550859 EPAS1Q99814 870 aa10.35□□□□□ -0.75
SMARCC2-211ENST00000550859 FOSBP53539 338 aa10.34□□□□□ -0.75
SMARCC2-211ENST00000550859 TESPA1A2RU30 521 aaPredicted RBP10.32□□□□□ -0.76
SMARCC2-211ENST00000550859 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
SMARCC2-211ENST00000550859 TYW1BQ6NUM6 668 aa10.32□□□□□ -0.76
SMARCC2-211ENST00000550859 FBXW7Q969H0 707 aa10.32□□□□□ -0.76
SMARCC2-211ENST00000550859 HS3ST6Q96QI5 342 aa10.32□□□□□ -0.76
SMARCC2-211ENST00000550859 PCDHGA10Q9Y5H3 936 aa10.32□□□□□ -0.76
SMARCC2-211ENST00000550859 ZDHHC16Q969W1 377 aa10.31□□□□□ -0.76
SMARCC2-211ENST00000550859 POTEMA6NI47 508 aa10.29□□□□□ -0.76
SMARCC2-211ENST00000550859 POTEGQ6S5H5 508 aa10.29□□□□□ -0.76
SMARCC2-211ENST00000550859 KCNH8Q96L42 1107 aa10.29□□□□□ -0.76
SMARCC2-211ENST00000550859 ZNF687Q8N1G0 1237 aa10.28□□□□□ -0.76
SMARCC2-211ENST00000550859 OSBPP22059 807 aa10.27□□□□□ -0.77
SMARCC2-211ENST00000550859 RBM33Q96EV2 1170 aaKnown RBP10.27□□□□□ -0.77
SMARCC2-211ENST00000550859 MAP3K7O43318 606 aa10.26□□□□□ -0.77
SMARCC2-211ENST00000550859 POTEB3A0JP26 581 aa10.24□□□□□ -0.77
SMARCC2-211ENST00000550859 PTPREP23469 700 aa10.24□□□□□ -0.77
SMARCC2-211ENST00000550859 EN1Q05925 392 aaPredicted RBP10.24□□□□□ -0.77
SMARCC2-211ENST00000550859 POTEBQ6S5H4 581 aa10.24□□□□□ -0.77
SMARCC2-211ENST00000550859 BCL2L12Q9HB09 334 aa10.24□□□□□ -0.77
SMARCC2-211ENST00000550859 PBX2P40425 430 aa10.23□□□□□ -0.77
SMARCC2-211ENST00000550859 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
SMARCC2-211ENST00000550859 ARHGAP33O14559 1287 aa10.22□□□□□ -0.77
SMARCC2-211ENST00000550859 C6orf132Q5T0Z8 1188 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms