RNA–Protein interactions for RNA: ENST00000550795.1

PXN-217, Transcript of paxillin, humanhuman

TSL 3

Gene PXN, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-217ENST00000550795 ZFYVE16Q7Z3T8 1539 aa39.36■■■■□ 3.89
PXN-217ENST00000550795 POGZQ7Z3K3 1410 aa39.35■■■■□ 3.89
PXN-217ENST00000550795 YEATS2Q9ULM3 1422 aa39.34■■■■□ 3.89
PXN-217ENST00000550795 PTPRMP28827 1452 aa39.34■■■■□ 3.89
PXN-217ENST00000550795 FYCO1Q9BQS8 1478 aa39.3■■■■□ 3.88
PXN-217ENST00000550795 CDC42BPBQ9Y5S2 1711 aa39.3■■■■□ 3.88
PXN-217ENST00000550795 CCDC18Q5T9S5 1454 aa39.3■■■■□ 3.88
PXN-217ENST00000550795 SCAPERQ9BY12 1400 aa39.29■■■■□ 3.88
PXN-217ENST00000550795 LOC105371045A0A1W2PR82 267 aa39.27■■■■□ 3.88
PXN-217ENST00000550795 RIMS1Q86UR5 1692 aaKnown RBP39.27■■■■□ 3.88
PXN-217ENST00000550795 MAGI2Q86UL8 1455 aa39.26■■■■□ 3.88
PXN-217ENST00000550795 CEP162Q5TB80 1403 aa39.25■■■■□ 3.87
PXN-217ENST00000550795 PREX2Q70Z35 1606 aa39.25■■■■□ 3.87
PXN-217ENST00000550795 ARHGAP5Q13017 1502 aa39.22■■■■□ 3.87
PXN-217ENST00000550795 KDM5CP41229 1560 aa39.19■■■■□ 3.86
PXN-217ENST00000550795 CDC42BPAQ5VT25 1732 aa39.17■■■■□ 3.86
PXN-217ENST00000550795 ARID4BQ4LE39 1312 aaPredicted RBP39.17■■■■□ 3.86
PXN-217ENST00000550795 EFCAB2Q5VUJ9 269 aa39.15■■■■□ 3.86
PXN-217ENST00000550795 FER1L4A9Z1Z3 1794 aa39.11■■■■□ 3.85
PXN-217ENST00000550795 ZNF518AQ6AHZ1 1483 aa39.11■■■■□ 3.85
PXN-217ENST00000550795 ABCC1P33527 1531 aa39.1■■■■□ 3.85
PXN-217ENST00000550795 ITSN2Q9NZM3 1697 aa39.1■■■■□ 3.85
PXN-217ENST00000550795 DIP2CQ9Y2E4 1556 aa39.04■■■■□ 3.84
PXN-217ENST00000550795 C9orf84Q5VXU9 1444 aa39.04■■■■□ 3.84
PXN-217ENST00000550795 ATP10AO60312 1499 aa39.04■■■■□ 3.84
PXN-217ENST00000550795 ARHGEF12Q9NZN5 1544 aa39.04■■■■□ 3.84
PXN-217ENST00000550795 ABCA6Q8N139 1617 aa39.02■■■■□ 3.84
PXN-217ENST00000550795 LMTK3Q96Q04 1460 aa39.01■■■■□ 3.84
PXN-217ENST00000550795 SAMD9LQ8IVG5 1584 aa38.95■■■■□ 3.83
PXN-217ENST00000550795 REREQ9P2R6 1566 aa38.95■■■■□ 3.83
PXN-217ENST00000550795 AFAP1Q8N556 730 aa38.94■■■■□ 3.82
PXN-217ENST00000550795 TRAPPC8Q9Y2L5 1435 aa38.94■■■■□ 3.82
PXN-217ENST00000550795 MTUS2Q5JR59 1369 aa38.91■■■■□ 3.82
PXN-217ENST00000550795 MLH3Q9UHC1 1453 aa38.91■■■■□ 3.82
PXN-217ENST00000550795 KIDINS220Q9ULH0 1771 aa38.9■■■■□ 3.82
PXN-217ENST00000550795 MLECQ14165 292 aa38.87■■■■□ 3.81
PXN-217ENST00000550795 GPATCH8Q9UKJ3 1502 aaKnown RBP38.87■■■■□ 3.81
PXN-217ENST00000550795 SYCP2Q9BX26 1530 aa38.84■■■■□ 3.81
PXN-217ENST00000550795 ILDR1Q86SU0 546 aaPredicted RBP38.81■■■■□ 3.8
PXN-217ENST00000550795 ZNF777Q9ULD5 760 aaPredicted RBP38.81■■■■□ 3.8
PXN-217ENST00000550795 VPS8Q8N3P4 1428 aa38.79■■■■□ 3.8
PXN-217ENST00000550795 CCNB3Q8WWL7 1395 aa38.77■■■■□ 3.8
PXN-217ENST00000550795 EHBP1L1Q8N3D4 1523 aa38.77■■■■□ 3.8
PXN-217ENST00000550795 AGLP35573 1532 aa38.76■■■■□ 3.8
PXN-217ENST00000550795 TIAM1Q13009 1591 aa38.76■■■■□ 3.8
PXN-217ENST00000550795 PLPPR3Q6T4P5 718 aa38.73■■■■□ 3.79
PXN-217ENST00000550795 CFDP1Q9UEE9 299 aaPredicted RBP38.73■■■■□ 3.79
PXN-217ENST00000550795 MYT1LQ9UL68 1186 aa38.73■■■■□ 3.79
PXN-217ENST00000550795 PREX1Q8TCU6 1659 aa38.73■■■■□ 3.79
PXN-217ENST00000550795 INO80Q9ULG1 1556 aaPredicted RBP38.7■■■■□ 3.79
PXN-217ENST00000550795 C3P01024 1663 aa38.68■■■■□ 3.78
PXN-217ENST00000550795 HNRNPMP52272 730 aaKnown RBP eCLIP38.66■■■■□ 3.78
PXN-217ENST00000550795 ATP7AQ04656 1500 aa38.63■■■■□ 3.78
PXN-217ENST00000550795 HSPA2P54652 639 aa38.63■■■■□ 3.77
PXN-217ENST00000550795 KIAA1107Q9UPP5 1409 aa38.63■■■■□ 3.77
PXN-217ENST00000550795 PLEKHH2Q8IVE3 1493 aa38.6■■■■□ 3.77
PXN-217ENST00000550795 PLXNC1O60486 1568 aa38.6■■■■□ 3.77
PXN-217ENST00000550795 ZNF644Q9H582 1327 aaPredicted RBP38.6■■■■□ 3.77
PXN-217ENST00000550795 SUPT6HQ7KZ85 1726 aaKnown RBP38.58■■■■□ 3.77
PXN-217ENST00000550795 CEBPAP49715 358 aaPredicted RBP38.58■■■■□ 3.77
PXN-217ENST00000550795 NCOA2Q15596 1464 aa38.58■■■■□ 3.77
PXN-217ENST00000550795 LRRC9Q6ZRR7 1453 aa38.54■■■■□ 3.76
PXN-217ENST00000550795 KANK4Q5T7N3 995 aaPredicted RBP38.52■■■■□ 3.76
PXN-217ENST00000550795 SPAG9O60271 1321 aaKnown RBP38.51■■■■□ 3.76
PXN-217ENST00000550795 MROH2AA6NES4 1674 aa38.49■■■■□ 3.75
PXN-217ENST00000550795 SETD1BQ9UPS6 1966 aaKnown RBP38.49■■■■□ 3.75
PXN-217ENST00000550795 MBD5Q9P267 1494 aa38.48■■■■□ 3.75
PXN-217ENST00000550795 MAP3K1Q13233 1512 aa38.48■■■■□ 3.75
PXN-217ENST00000550795 ADGBQ8N7X0 1667 aa38.47■■■■□ 3.75
PXN-217ENST00000550795 STRCQ7RTU9 1775 aa38.47■■■■□ 3.75
PXN-217ENST00000550795 A2MP01023 1474 aa38.42■■■■□ 3.74
PXN-217ENST00000550795 CLTCQ00610 1675 aaKnown RBP38.4■■■■□ 3.74
PXN-217ENST00000550795 UHRF1BP1Q6BDS2 1440 aa38.4■■■■□ 3.74
PXN-217ENST00000550795 CNTLNQ9NXG0 1405 aa38.39■■■■□ 3.74
PXN-217ENST00000550795 CAMSAP2Q08AD1 1489 aa38.37■■■■□ 3.73
PXN-217ENST00000550795 APLP2Q06481 763 aa38.3■■■■□ 3.72
PXN-217ENST00000550795 CCDC141Q6ZP82 1450 aa38.28■■■■□ 3.72
PXN-217ENST00000550795 FBXO41Q8TF61 875 aa38.28■■■■□ 3.72
PXN-217ENST00000550795 RTEL1-TNFRSF6BF6WH68 1400 aa38.28■■■■□ 3.72
PXN-217ENST00000550795 ARHGEF5Q12774 1597 aa38.25■■■■□ 3.71
PXN-217ENST00000550795 ESF1Q9H501 851 aaKnown RBP38.24■■■■□ 3.71
PXN-217ENST00000550795 NPATQ14207 1427 aa38.22■■■■□ 3.71
PXN-217ENST00000550795 MYO3AQ8NEV4 1616 aa38.22■■■■□ 3.71
PXN-217ENST00000550795 MYOM3Q5VTT5 1437 aa38.21■■■■□ 3.71
PXN-217ENST00000550795 ZNF142P52746 1687 aaPredicted RBP38.2■■■■□ 3.71
PXN-217ENST00000550795 ZMYM3Q14202 1370 aa38.2■■■■□ 3.71
PXN-217ENST00000550795 RSPH4AQ5TD94 716 aa38.2■■■■□ 3.71
PXN-217ENST00000550795 MIA2Q96PC5 1412 aa38.14■■■■□ 3.7
PXN-217ENST00000550795 PTPRKQ15262 1439 aa38.13■■■■□ 3.7
PXN-217ENST00000550795 DHX29Q7Z478 1369 aaKnown RBP38.12■■■■□ 3.69
PXN-217ENST00000550795 NCOA1Q15788 1441 aa38.12■■■■□ 3.69
PXN-217ENST00000550795 GGT6Q6P531 493 aa38.1■■■■□ 3.69
PXN-217ENST00000550795 TSPY4P0CV99 314 aa38.09■■■■□ 3.69
PXN-217ENST00000550795 TSPY10P0CW01 314 aa38.09■■■■□ 3.69
PXN-217ENST00000550795 MAST1Q9Y2H9 1570 aa38.09■■■■□ 3.69
PXN-217ENST00000550795 CAMSAP1Q5T5Y3 1602 aa38.09■■■■□ 3.69
PXN-217ENST00000550795 CEP170BQ9Y4F5 1589 aaPredicted RBP38.06■■■■□ 3.68
PXN-217ENST00000550795 PTPRTO14522 1441 aa38.05■■■■□ 3.68
PXN-217ENST00000550795 KDM5DQ9BY66 1539 aa38.02■■■■□ 3.68
PXN-217ENST00000550795 FAM135AQ9P2D6 1515 aa38.02■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms