RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 SETQ01105 290 aaPredicted RBP8.87□□□□□ -0.99
LINC02388-201ENST00000550678 FAM43BQ6ZT52 329 aaPredicted RBP8.87□□□□□ -0.99
LINC02388-201ENST00000550678 MIER1Q8N108 512 aa8.86□□□□□ -0.99
LINC02388-201ENST00000550678 CHMP4BQ9H444 224 aaKnown RBP8.86□□□□□ -0.99
LINC02388-201ENST00000550678 SLC24A3Q9HC58 644 aa8.85□□□□□ -0.99
LINC02388-201ENST00000550678 FTSJ3Q8IY81 847 aaKnown RBP8.84□□□□□ -0.99
LINC02388-201ENST00000550678 MCCP23508 829 aa8.83□□□□□ -1
LINC02388-201ENST00000550678 ANAPC15P60006 121 aa8.83□□□□□ -1
LINC02388-201ENST00000550678 HS6ST3Q8IZP7 471 aa8.82□□□□□ -1
LINC02388-201ENST00000550678 APBB1O00213 710 aa8.82□□□□□ -1
LINC02388-201ENST00000550678 KDM4AO75164 1064 aa8.81□□□□□ -1
LINC02388-201ENST00000550678 NKX1-1Q15270 411 aaPredicted RBP8.81□□□□□ -1
LINC02388-201ENST00000550678 P3H3Q8IVL6 736 aa8.81□□□□□ -1
LINC02388-201ENST00000550678 ZC3H15Q8WU90 426 aaKnown RBP8.81□□□□□ -1
LINC02388-201ENST00000550678 MAFGO15525 162 aa8.8□□□□□ -1
LINC02388-201ENST00000550678 DNAJC2Q99543 621 aaKnown RBP8.79□□□□□ -1
LINC02388-201ENST00000550678 DCAF8L1A6NGE4 600 aa8.77□□□□□ -1
LINC02388-201ENST00000550678 GPATCH11Q8N954 259 aa8.77□□□□□ -1
LINC02388-201ENST00000550678 GTPBP6O43824 516 aaPredicted RBP8.77□□□□□ -1.01
LINC02388-201ENST00000550678 PTMAP06454 111 aaKnown RBP8.76□□□□□ -1.01
LINC02388-201ENST00000550678 HOXD11P31277 338 aaPredicted RBP8.76□□□□□ -1.01
LINC02388-201ENST00000550678 NEFMP07197 916 aa8.75□□□□□ -1.01
LINC02388-201ENST00000550678 MFAP1P55081 439 aaKnown RBP8.75□□□□□ -1.01
LINC02388-201ENST00000550678 MKRN4PQ13434 485 aaPredicted RBP8.74□□□□□ -1.01
LINC02388-201ENST00000550678 OS9Q13438 667 aaPredicted RBP8.73□□□□□ -1.01
LINC02388-201ENST00000550678 TMCO4Q5TGY1 634 aa8.73□□□□□ -1.01
LINC02388-201ENST00000550678 KCNV2Q8TDN2 545 aa8.73□□□□□ -1.01
LINC02388-201ENST00000550678 E9PSI1 815 aa8.72□□□□□ -1.01
LINC02388-201ENST00000550678 GTF2E1P29083 439 aaPredicted RBP8.72□□□□□ -1.01
LINC02388-201ENST00000550678 RBM19Q9Y4C8 960 aaKnown RBP8.72□□□□□ -1.01
LINC02388-201ENST00000550678 ZCCHC6Q5VYS8 1495 aaKnown RBP8.72□□□□□ -1.01
LINC02388-201ENST00000550678 AEBP1Q8IUX7 1158 aa8.72□□□□□ -1.01
LINC02388-201ENST00000550678 FAM193AP78312 1265 aa8.71□□□□□ -1.02
LINC02388-201ENST00000550678 HNRNPUL2Q1KMD3 747 aaKnown RBP8.71□□□□□ -1.02
LINC02388-201ENST00000550678 CCDC125Q86Z20 511 aa8.7□□□□□ -1.02
LINC02388-201ENST00000550678 CCDC82Q8N4S0 544 aa8.7□□□□□ -1.02
LINC02388-201ENST00000550678 CADPSQ9ULU8 1353 aa8.69□□□□□ -1.02
LINC02388-201ENST00000550678 MKRN3Q13064 507 aaKnown RBP8.69□□□□□ -1.02
LINC02388-201ENST00000550678 FAM50AQ14320 339 aaKnown RBP8.69□□□□□ -1.02
LINC02388-201ENST00000550678 EXOC8Q8IYI6 725 aa8.68□□□□□ -1.02
LINC02388-201ENST00000550678 PLEKHD1A6NEE1 506 aa8.68□□□□□ -1.02
LINC02388-201ENST00000550678 HSP90AB4PQ58FF6 505 aa8.67□□□□□ -1.02
LINC02388-201ENST00000550678 IL27Q8NEV9 243 aa8.67□□□□□ -1.02
LINC02388-201ENST00000550678 LOC102724159A0A0B4J2E5 919 aa8.66□□□□□ -1.02
LINC02388-201ENST00000550678 PWP2Q15269 919 aaKnown RBP8.66□□□□□ -1.02
LINC02388-201ENST00000550678 TMTC2Q8N394 836 aa8.66□□□□□ -1.02
LINC02388-201ENST00000550678 GPBP1L1Q9HC44 474 aaPredicted RBP8.66□□□□□ -1.02
LINC02388-201ENST00000550678 ZNF219Q9P2Y4 722 aaPredicted RBP8.66□□□□□ -1.02
LINC02388-201ENST00000550678 PATL2C9JE40 543 aaKnown RBP8.66□□□□□ -1.02
LINC02388-201ENST00000550678 CANXP27824 592 aaKnown RBP8.65□□□□□ -1.02
LINC02388-201ENST00000550678 TRAIPQ9BWF2 469 aa8.65□□□□□ -1.02
LINC02388-201ENST00000550678 STAC3Q96MF2 364 aa8.64□□□□□ -1.03
LINC02388-201ENST00000550678 LAS1LQ9Y4W2 734 aaKnown RBP8.64□□□□□ -1.03
LINC02388-201ENST00000550678 RNF25Q96BH1 459 aaPredicted RBP8.64□□□□□ -1.03
LINC02388-201ENST00000550678 GZF1Q9H116 711 aaPredicted RBP8.64□□□□□ -1.03
LINC02388-201ENST00000550678 CIZ1Q9ULV3 898 aaPredicted RBP8.64□□□□□ -1.03
LINC02388-201ENST00000550678 FAM9BQ8IZU0 186 aa8.63□□□□□ -1.03
LINC02388-201ENST00000550678 SGSM3Q96HU1 749 aa8.63□□□□□ -1.03
LINC02388-201ENST00000550678 PHF14O94880 888 aa8.62□□□□□ -1.03
LINC02388-201ENST00000550678 RIPOR2Q9Y4F9 1068 aa8.62□□□□□ -1.03
LINC02388-201ENST00000550678 FANCIQ9NVI1 1328 aa8.62□□□□□ -1.03
LINC02388-201ENST00000550678 ABCC9O60706 1549 aa8.61□□□□□ -1.03
LINC02388-201ENST00000550678 RTL5Q5HYW3 569 aaPredicted RBP8.61□□□□□ -1.03
LINC02388-201ENST00000550678 CLGNO14967 610 aa8.61□□□□□ -1.03
LINC02388-201ENST00000550678 BRD1O95696 1058 aa8.61□□□□□ -1.03
LINC02388-201ENST00000550678 CNGB1Q14028 1251 aaPredicted RBP8.61□□□□□ -1.03
LINC02388-201ENST00000550678 ZMYND10O75800 440 aa8.6□□□□□ -1.03
LINC02388-201ENST00000550678 ZNF622Q969S3 477 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC02388-201ENST00000550678 FOXD4L6Q3SYB3 417 aaPredicted RBP8.57□□□□□ -1.04
LINC02388-201ENST00000550678 FOXD4L3Q6VB84 417 aaPredicted RBP8.57□□□□□ -1.04
LINC02388-201ENST00000550678 WDR70Q9NW82 654 aa8.57□□□□□ -1.04
LINC02388-201ENST00000550678 SPTY2D1Q68D10 685 aaPredicted RBP8.56□□□□□ -1.04
LINC02388-201ENST00000550678 NOL8Q76FK4 1167 aaKnown RBP8.55□□□□□ -1.04
LINC02388-201ENST00000550678 PLSCR2Q9NRY7 297 aa8.55□□□□□ -1.04
LINC02388-201ENST00000550678 SMARCA5O60264 1052 aaPredicted RBP8.54□□□□□ -1.04
LINC02388-201ENST00000550678 MMP14P50281 582 aa8.54□□□□□ -1.04
LINC02388-201ENST00000550678 RYDENQ9NUL5 291 aaKnown RBP8.54□□□□□ -1.04
LINC02388-201ENST00000550678 VGFO15240 615 aaPredicted RBP8.53□□□□□ -1.04
LINC02388-201ENST00000550678 KDM4CQ9H3R0 1056 aa8.53□□□□□ -1.04
LINC02388-201ENST00000550678 PLCD3Q8N3E9 789 aa8.53□□□□□ -1.04
LINC02388-201ENST00000550678 WRNQ14191 1432 aaPredicted RBP eCLIP8.52□□□□□ -1.05
LINC02388-201ENST00000550678 SOX12O15370 315 aa8.5□□□□□ -1.05
LINC02388-201ENST00000550678 SEMA3EO15041 775 aa8.5□□□□□ -1.05
LINC02388-201ENST00000550678 TRAK2O60296 914 aa8.5□□□□□ -1.05
LINC02388-201ENST00000550678 CLUAP1Q96AJ1 413 aa8.5□□□□□ -1.05
LINC02388-201ENST00000550678 STAG3Q9UJ98 1225 aa8.5□□□□□ -1.05
LINC02388-201ENST00000550678 FLIIQ13045 1269 aa8.49□□□□□ -1.05
LINC02388-201ENST00000550678 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
LINC02388-201ENST00000550678 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
LINC02388-201ENST00000550678 ITGAEP38570 1179 aa8.48□□□□□ -1.05
LINC02388-201ENST00000550678 POLA2Q14181 598 aa8.48□□□□□ -1.05
LINC02388-201ENST00000550678 TESPA1A2RU30 521 aaPredicted RBP8.47□□□□□ -1.05
LINC02388-201ENST00000550678 MARCH6O60337 910 aa8.47□□□□□ -1.05
LINC02388-201ENST00000550678 AXDND1Q5T1B0 1012 aaPredicted RBP8.47□□□□□ -1.05
LINC02388-201ENST00000550678 BARGINQ6ZT62 677 aa8.47□□□□□ -1.05
LINC02388-201ENST00000550678 PRDM4Q9UKN5 801 aa8.47□□□□□ -1.05
LINC02388-201ENST00000550678 HDAC5Q9UQL6 1122 aa8.47□□□□□ -1.05
LINC02388-201ENST00000550678 ANKRD13AQ8IZ07 590 aa8.46□□□□□ -1.05
LINC02388-201ENST00000550678 MYH16Q9H6N6 1097 aa8.46□□□□□ -1.05
LINC02388-201ENST00000550678 ONECUT3O60422 494 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms