RNA–Protein interactions for RNA: ENST00000549896.1

AC013417.1-201, humanhuman

TSL 5 BASIC

Gene AC013417.1, Length 271 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013417.1-201ENST00000549896 HOXB3P14651 431 aaPredicted RBP12.72□□□□□ -0.37
AC013417.1-201ENST00000549896 EMP3P54852 163 aa12.71□□□□□ -0.37
AC013417.1-201ENST00000549896 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
AC013417.1-201ENST00000549896 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
AC013417.1-201ENST00000549896 MARVELD3Q96A59 401 aa12.67□□□□□ -0.38
AC013417.1-201ENST00000549896 PPP1R37O75864 691 aa12.66□□□□□ -0.38
AC013417.1-201ENST00000549896 HOXB1P14653 301 aaPredicted RBP12.66□□□□□ -0.38
AC013417.1-201ENST00000549896 CDAN1Q8IWY9 1227 aa12.66□□□□□ -0.38
AC013417.1-201ENST00000549896 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
AC013417.1-201ENST00000549896 C2orf72A6NCS6 295 aa12.63□□□□□ -0.39
AC013417.1-201ENST00000549896 KIF3CO14782 793 aa12.63□□□□□ -0.39
AC013417.1-201ENST00000549896 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
AC013417.1-201ENST00000549896 FAM205CA6NFA0 338 aa12.58□□□□□ -0.4
AC013417.1-201ENST00000549896 HS3ST6Q96QI5 342 aa12.56□□□□□ -0.4
AC013417.1-201ENST00000549896 ERBB3P21860 1342 aa12.56□□□□□ -0.4
AC013417.1-201ENST00000549896 SLC34A2O95436 690 aa12.54□□□□□ -0.4
AC013417.1-201ENST00000549896 GPR153Q6NV75 609 aa12.54□□□□□ -0.4
AC013417.1-201ENST00000549896 GTPBP6O43824 516 aaPredicted RBP12.53□□□□□ -0.4
AC013417.1-201ENST00000549896 GPHNQ9NQX3 736 aaPredicted RBP12.53□□□□□ -0.4
AC013417.1-201ENST00000549896 FOXK1P85037 733 aa12.51□□□□□ -0.41
AC013417.1-201ENST00000549896 ARSIQ5FYB1 569 aa12.5□□□□□ -0.41
AC013417.1-201ENST00000549896 RTN4Q9NQC3 1192 aaKnown RBP12.5□□□□□ -0.41
AC013417.1-201ENST00000549896 BBXQ8WY36 941 aaPredicted RBP12.49□□□□□ -0.41
AC013417.1-201ENST00000549896 PDE4AP27815 886 aa12.46□□□□□ -0.41
AC013417.1-201ENST00000549896 PLPP6Q8IY26 295 aa12.46□□□□□ -0.41
AC013417.1-201ENST00000549896 TBC1D12O60347 775 aa12.45□□□□□ -0.42
AC013417.1-201ENST00000549896 VARS2Q5ST30 1063 aaKnown RBP12.45□□□□□ -0.42
AC013417.1-201ENST00000549896 PCDHGA4Q9Y5G9 962 aa12.45□□□□□ -0.42
AC013417.1-201ENST00000549896 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.44□□□□□ -0.42
AC013417.1-201ENST00000549896 CRISPLD2Q9H0B8 497 aa12.43□□□□□ -0.42
AC013417.1-201ENST00000549896 POTEB3A0JP26 581 aa12.42□□□□□ -0.42
AC013417.1-201ENST00000549896 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
AC013417.1-201ENST00000549896 DSG2Q14126 1118 aa12.42□□□□□ -0.42
AC013417.1-201ENST00000549896 POTEBQ6S5H4 581 aa12.42□□□□□ -0.42
AC013417.1-201ENST00000549896 PTCD2Q8WV60 388 aaKnown RBP12.41□□□□□ -0.42
AC013417.1-201ENST00000549896 NUDT7P0C024 238 aa12.39□□□□□ -0.43
AC013417.1-201ENST00000549896 ZNF687Q8N1G0 1237 aa12.39□□□□□ -0.43
AC013417.1-201ENST00000549896 PSDA5PKW4 1024 aaPredicted RBP12.38□□□□□ -0.43
AC013417.1-201ENST00000549896 PPP1R15BQ5SWA1 713 aa12.38□□□□□ -0.43
AC013417.1-201ENST00000549896 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.43
AC013417.1-201ENST00000549896 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
AC013417.1-201ENST00000549896 KRTAP3-3Q9BYR6 98 aa12.35□□□□□ -0.43
AC013417.1-201ENST00000549896 KRTAP3-2Q9BYR7 98 aa12.35□□□□□ -0.43
AC013417.1-201ENST00000549896 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
AC013417.1-201ENST00000549896 LARP6Q9BRS8 491 aaKnown RBP12.34□□□□□ -0.43
AC013417.1-201ENST00000549896 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
AC013417.1-201ENST00000549896 SPNS2Q8IVW8 549 aa12.32□□□□□ -0.44
AC013417.1-201ENST00000549896 LHX6Q9UPM6 363 aa12.31□□□□□ -0.44
AC013417.1-201ENST00000549896 PBX2P40425 430 aa12.3□□□□□ -0.44
AC013417.1-201ENST00000549896 MFSD10Q14728 455 aa12.29□□□□□ -0.44
AC013417.1-201ENST00000549896 OXER1Q8TDS5 423 aa12.29□□□□□ -0.44
AC013417.1-201ENST00000549896 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
AC013417.1-201ENST00000549896 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
AC013417.1-201ENST00000549896 PTGER2P43116 358 aa12.24□□□□□ -0.45
AC013417.1-201ENST00000549896 MMRN1Q13201 1228 aa12.24□□□□□ -0.45
AC013417.1-201ENST00000549896 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
AC013417.1-201ENST00000549896 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
AC013417.1-201ENST00000549896 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
AC013417.1-201ENST00000549896 CADPS2Q86UW7 1296 aa12.21□□□□□ -0.45
AC013417.1-201ENST00000549896 KCNH8Q96L42 1107 aa12.21□□□□□ -0.45
AC013417.1-201ENST00000549896 MAP3K9P80192 1104 aa12.2□□□□□ -0.46
AC013417.1-201ENST00000549896 LSM11P83369 360 aaKnown RBP eCLIP12.18□□□□□ -0.46
AC013417.1-201ENST00000549896 ARHGAP33O14559 1287 aa12.17□□□□□ -0.46
AC013417.1-201ENST00000549896 ANKRD13DQ6ZTN6 518 aa12.17□□□□□ -0.46
AC013417.1-201ENST00000549896 EVI5O60447 810 aa12.15□□□□□ -0.46
AC013417.1-201ENST00000549896 ZNF454Q8N9F8 522 aa12.13□□□□□ -0.47
AC013417.1-201ENST00000549896 ANO8Q9HCE9 1232 aaPredicted RBP12.13□□□□□ -0.47
AC013417.1-201ENST00000549896 MYT1LQ9UL68 1186 aa12.12□□□□□ -0.47
AC013417.1-201ENST00000549896 CAMK2BQ13554 666 aa12.11□□□□□ -0.47
AC013417.1-201ENST00000549896 JPH4Q96JJ6 628 aa12.11□□□□□ -0.47
AC013417.1-201ENST00000549896 WDR70Q9NW82 654 aa12.11□□□□□ -0.47
AC013417.1-201ENST00000549896 EMILIN3Q9NT22 766 aa12.1□□□□□ -0.47
AC013417.1-201ENST00000549896 AXIN2Q9Y2T1 843 aa12.1□□□□□ -0.47
AC013417.1-201ENST00000549896 RNF166Q96A37 237 aaPredicted RBP12.09□□□□□ -0.47
AC013417.1-201ENST00000549896 TK2O00142 265 aa12.08□□□□□ -0.48
AC013417.1-201ENST00000549896 FOSBP53539 338 aa12.08□□□□□ -0.48
AC013417.1-201ENST00000549896 POTEEQ6S8J3 1075 aa12.07□□□□□ -0.48
AC013417.1-201ENST00000549896 BCL2L12Q9HB09 334 aa12.06□□□□□ -0.48
AC013417.1-201ENST00000549896 PTPREP23469 700 aa12.04□□□□□ -0.48
AC013417.1-201ENST00000549896 ADGRD1Q6QNK2 874 aa12.04□□□□□ -0.48
AC013417.1-201ENST00000549896 ZDHHC16Q969W1 377 aa12.04□□□□□ -0.48
AC013417.1-201ENST00000549896 KCNK17Q96T54 332 aa12.04□□□□□ -0.48
AC013417.1-201ENST00000549896 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
AC013417.1-201ENST00000549896 PSEN2P49810 448 aa12.02□□□□□ -0.49
AC013417.1-201ENST00000549896 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
AC013417.1-201ENST00000549896 DPYSL4O14531 572 aa12.01□□□□□ -0.49
AC013417.1-201ENST00000549896 E2F4Q16254 413 aa12.01□□□□□ -0.49
AC013417.1-201ENST00000549896 PHF14O94880 888 aa12□□□□□ -0.49
AC013417.1-201ENST00000549896 TYW1BQ6NUM6 668 aa11.99□□□□□ -0.49
AC013417.1-201ENST00000549896 SPDYE16A6NNV3 312 aaPredicted RBP11.98□□□□□ -0.49
AC013417.1-201ENST00000549896 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
AC013417.1-201ENST00000549896 EPAS1Q99814 870 aa11.98□□□□□ -0.49
AC013417.1-201ENST00000549896 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
AC013417.1-201ENST00000549896 ADAM33Q9BZ11 813 aa11.95□□□□□ -0.5
AC013417.1-201ENST00000549896 PCDHGA10Q9Y5H3 936 aa11.95□□□□□ -0.5
AC013417.1-201ENST00000549896 ARIH1Q9Y4X5 557 aaPredicted RBP11.94□□□□□ -0.5
AC013417.1-201ENST00000549896 PDIA6Q15084 440 aa11.93□□□□□ -0.5
AC013417.1-201ENST00000549896 HRO43593 1189 aa11.92□□□□□ -0.5
AC013417.1-201ENST00000549896 VPS9D1Q9Y2B5 631 aa11.92□□□□□ -0.5
AC013417.1-201ENST00000549896 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms