RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 LHX8Q68G74 356 aa12.64□□□□□ -0.39
UBE2N-204ENST00000549833 NACADO15069 1562 aa12.64□□□□□ -0.39
UBE2N-204ENST00000549833 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
UBE2N-204ENST00000549833 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.63□□□□□ -0.39
UBE2N-204ENST00000549833 POTEJP0CG39 1038 aa12.61□□□□□ -0.39
UBE2N-204ENST00000549833 TSHZ2Q9NRE2 1034 aa12.6□□□□□ -0.39
UBE2N-204ENST00000549833 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
UBE2N-204ENST00000549833 MYO15BQ96JP2 1530 aa12.57□□□□□ -0.4
UBE2N-204ENST00000549833 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
UBE2N-204ENST00000549833 TMC2Q8TDI7 906 aa12.55□□□□□ -0.4
UBE2N-204ENST00000549833 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
UBE2N-204ENST00000549833 PDE4AP27815 886 aa12.52□□□□□ -0.41
UBE2N-204ENST00000549833 CRISPLD2Q9H0B8 497 aa12.52□□□□□ -0.41
UBE2N-204ENST00000549833 SLAIN1Q8ND83 568 aa12.51□□□□□ -0.41
UBE2N-204ENST00000549833 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
UBE2N-204ENST00000549833 NCKAP5LQ9HCH0 1330 aa12.5□□□□□ -0.41
UBE2N-204ENST00000549833 C2orf72A6NCS6 295 aa12.49□□□□□ -0.41
UBE2N-204ENST00000549833 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
UBE2N-204ENST00000549833 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
UBE2N-204ENST00000549833 KIF3CO14782 793 aa12.47□□□□□ -0.41
UBE2N-204ENST00000549833 LARP6Q9BRS8 491 aaKnown RBP12.47□□□□□ -0.41
UBE2N-204ENST00000549833 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
UBE2N-204ENST00000549833 DDX27Q96GQ7 796 aaKnown RBP12.46□□□□□ -0.41
UBE2N-204ENST00000549833 WDR70Q9NW82 654 aa12.45□□□□□ -0.42
UBE2N-204ENST00000549833 FOXK1P85037 733 aa12.44□□□□□ -0.42
UBE2N-204ENST00000549833 MFSD10Q14728 455 aa12.44□□□□□ -0.42
UBE2N-204ENST00000549833 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
UBE2N-204ENST00000549833 DSG2Q14126 1118 aa12.41□□□□□ -0.42
UBE2N-204ENST00000549833 SCRIBQ14160 1630 aa12.38□□□□□ -0.43
UBE2N-204ENST00000549833 PLPP6Q8IY26 295 aa12.38□□□□□ -0.43
UBE2N-204ENST00000549833 KDM2AQ9Y2K7 1162 aa12.36□□□□□ -0.43
UBE2N-204ENST00000549833 SNPHO15079 494 aa12.35□□□□□ -0.43
UBE2N-204ENST00000549833 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
UBE2N-204ENST00000549833 E2F4Q16254 413 aa12.31□□□□□ -0.44
UBE2N-204ENST00000549833 P3H3Q8IVL6 736 aa12.31□□□□□ -0.44
UBE2N-204ENST00000549833 RIMBP2O15034 1052 aa12.29□□□□□ -0.44
UBE2N-204ENST00000549833 CAMK2BQ13554 666 aa12.29□□□□□ -0.44
UBE2N-204ENST00000549833 BICRAQ9NZM4 1560 aa12.28□□□□□ -0.44
UBE2N-204ENST00000549833 SLC34A2O95436 690 aa12.27□□□□□ -0.45
UBE2N-204ENST00000549833 HOXB3P14651 431 aaPredicted RBP12.26□□□□□ -0.45
UBE2N-204ENST00000549833 ZNF710Q8N1W2 664 aa12.26□□□□□ -0.45
UBE2N-204ENST00000549833 KCNV2Q8TDN2 545 aa12.23□□□□□ -0.45
UBE2N-204ENST00000549833 UPF1Q92900 1129 aaKnown RBP eCLIP12.23□□□□□ -0.45
UBE2N-204ENST00000549833 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
UBE2N-204ENST00000549833 TBC1D12O60347 775 aa12.22□□□□□ -0.45
UBE2N-204ENST00000549833 PTCD2Q8WV60 388 aaKnown RBP12.22□□□□□ -0.45
UBE2N-204ENST00000549833 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
UBE2N-204ENST00000549833 OXER1Q8TDS5 423 aa12.21□□□□□ -0.45
UBE2N-204ENST00000549833 PCDHGA4Q9Y5G9 962 aa12.19□□□□□ -0.46
UBE2N-204ENST00000549833 ZNF316A6NFI3 1004 aaPredicted RBP12.18□□□□□ -0.46
UBE2N-204ENST00000549833 MAP3K9P80192 1104 aa12.18□□□□□ -0.46
UBE2N-204ENST00000549833 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
UBE2N-204ENST00000549833 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
UBE2N-204ENST00000549833 DPYSL4O14531 572 aa12.16□□□□□ -0.46
UBE2N-204ENST00000549833 SHROOM4Q9ULL8 1493 aa12.15□□□□□ -0.46
UBE2N-204ENST00000549833 HOXB1P14653 301 aaPredicted RBP12.13□□□□□ -0.47
UBE2N-204ENST00000549833 ARSIQ5FYB1 569 aa12.13□□□□□ -0.47
UBE2N-204ENST00000549833 GPR153Q6NV75 609 aa12.13□□□□□ -0.47
UBE2N-204ENST00000549833 FAM163AQ96GL9 167 aaPredicted RBP12.13□□□□□ -0.47
UBE2N-204ENST00000549833 ST18O60284 1047 aa12.12□□□□□ -0.47
UBE2N-204ENST00000549833 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
UBE2N-204ENST00000549833 PDIA6Q15084 440 aa12.1□□□□□ -0.47
UBE2N-204ENST00000549833 EVI5O60447 810 aa12.09□□□□□ -0.47
UBE2N-204ENST00000549833 NUDT7P0C024 238 aa12.09□□□□□ -0.47
UBE2N-204ENST00000549833 KHSRPQ92945 711 aaKnown RBP eCLIP12.08□□□□□ -0.487e-7■□□□□ 11.2
UBE2N-204ENST00000549833 NBR1Q14596 966 aa12.05□□□□□ -0.48
UBE2N-204ENST00000549833 EMP3P54852 163 aa12.04□□□□□ -0.48
UBE2N-204ENST00000549833 KDM4FA0A1W2PPD8 638 aa12.02□□□□□ -0.49
UBE2N-204ENST00000549833 LCE2DQ5TA82 110 aaPredicted RBP12.02□□□□□ -0.49
UBE2N-204ENST00000549833 ANO8Q9HCE9 1232 aaPredicted RBP12.01□□□□□ -0.49
UBE2N-204ENST00000549833 MARVELD3Q96A59 401 aa12□□□□□ -0.49
UBE2N-204ENST00000549833 PSDA5PKW4 1024 aaPredicted RBP11.99□□□□□ -0.49
UBE2N-204ENST00000549833 LHX6Q9UPM6 363 aa11.99□□□□□ -0.49
UBE2N-204ENST00000549833 ERBB3P21860 1342 aa11.98□□□□□ -0.49
UBE2N-204ENST00000549833 PTGER2P43116 358 aa11.97□□□□□ -0.49
UBE2N-204ENST00000549833 JPH4Q96JJ6 628 aa11.97□□□□□ -0.49
UBE2N-204ENST00000549833 SEMA3EO15041 775 aa11.95□□□□□ -0.5
UBE2N-204ENST00000549833 BCANQ96GW7 911 aa11.95□□□□□ -0.5
UBE2N-204ENST00000549833 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
UBE2N-204ENST00000549833 ZNF454Q8N9F8 522 aa11.94□□□□□ -0.5
UBE2N-204ENST00000549833 DDX12PQ92771 950 aa11.94□□□□□ -0.5
UBE2N-204ENST00000549833 FAM205CA6NFA0 338 aa11.93□□□□□ -0.5
UBE2N-204ENST00000549833 PHF14O94880 888 aa11.93□□□□□ -0.5
UBE2N-204ENST00000549833 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
UBE2N-204ENST00000549833 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
UBE2N-204ENST00000549833 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
UBE2N-204ENST00000549833 GRXCR2A6NFK2 248 aa11.92□□□□□ -0.5
UBE2N-204ENST00000549833 FOSBP53539 338 aa11.92□□□□□ -0.5
UBE2N-204ENST00000549833 SMYD5Q6GMV2 418 aa11.92□□□□□ -0.5
UBE2N-204ENST00000549833 EPAS1Q99814 870 aa11.92□□□□□ -0.5
UBE2N-204ENST00000549833 TULP1O00294 542 aaPredicted RBP11.91□□□□□ -0.5
UBE2N-204ENST00000549833 MLLT3P42568 568 aaPredicted RBP11.9□□□□□ -0.5
UBE2N-204ENST00000549833 TYW1BQ6NUM6 668 aa11.9□□□□□ -0.5
UBE2N-204ENST00000549833 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
UBE2N-204ENST00000549833 HS3ST6Q96QI5 342 aa11.9□□□□□ -0.5
UBE2N-204ENST00000549833 PCDHGA10Q9Y5H3 936 aa11.89□□□□□ -0.51
UBE2N-204ENST00000549833 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
UBE2N-204ENST00000549833 CECR2Q9BXF3 1484 aa11.87□□□□□ -0.51
UBE2N-204ENST00000549833 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
UBE2N-204ENST00000549833 POTEGQ6S5H5 508 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms