RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 RICTORQ6R327 1708 aa22.51■■□□□ 1.19
CNOT2-220ENST00000549750 MLECQ14165 292 aa22.5■■□□□ 1.19
CNOT2-220ENST00000549750 EHMT2Q96KQ7 1210 aa22.48■■□□□ 1.19
CNOT2-220ENST00000549750 DMRT2Q9Y5R5 561 aa22.47■■□□□ 1.19
CNOT2-220ENST00000549750 PLCH2O75038 1416 aa22.46■■□□□ 1.19
CNOT2-220ENST00000549750 ZMYM4Q5VZL5 1548 aa22.46■■□□□ 1.19
CNOT2-220ENST00000549750 YEATS2Q9ULM3 1422 aa22.45■■□□□ 1.18
CNOT2-220ENST00000549750 ZFYVE16Q7Z3T8 1539 aa22.44■■□□□ 1.18
CNOT2-220ENST00000549750 CDK11AQ9UQ88 783 aaPredicted RBP22.44■■□□□ 1.18
CNOT2-220ENST00000549750 LRRIQ1Q96JM4 1722 aa22.43■■□□□ 1.18
CNOT2-220ENST00000549750 MAGI2Q86UL8 1455 aa22.43■■□□□ 1.18
CNOT2-220ENST00000549750 TROQ12816 1431 aaPredicted RBP22.41■■□□□ 1.18
CNOT2-220ENST00000549750 MYO5CQ9NQX4 1742 aa22.41■■□□□ 1.18
CNOT2-220ENST00000549750 KIF14Q15058 1648 aa22.41■■□□□ 1.18
CNOT2-220ENST00000549750 SIGLEC1Q9BZZ2 1709 aa22.39■■□□□ 1.17
CNOT2-220ENST00000549750 CASKIN1Q8WXD9 1431 aa22.39■■□□□ 1.17
CNOT2-220ENST00000549750 FER1L4A9Z1Z3 1794 aa22.38■■□□□ 1.17
CNOT2-220ENST00000549750 CCDC18Q5T9S5 1454 aa22.37■■□□□ 1.17
CNOT2-220ENST00000549750 CEBPAP49715 358 aaPredicted RBP22.37■■□□□ 1.17
CNOT2-220ENST00000549750 ATP1B4Q9UN42 357 aaPredicted RBP22.37■■□□□ 1.17
CNOT2-220ENST00000549750 CLIP1P30622 1438 aa22.36■■□□□ 1.17
CNOT2-220ENST00000549750 PREX1Q8TCU6 1659 aa22.33■■□□□ 1.17
CNOT2-220ENST00000549750 SCAPERQ9BY12 1400 aa22.33■■□□□ 1.17
CNOT2-220ENST00000549750 ATP10AO60312 1499 aa22.33■■□□□ 1.16
CNOT2-220ENST00000549750 ARHGEF12Q9NZN5 1544 aa22.32■■□□□ 1.16
CNOT2-220ENST00000549750 EFCAB2Q5VUJ9 269 aa22.32■■□□□ 1.16
CNOT2-220ENST00000549750 FYCO1Q9BQS8 1478 aa22.32■■□□□ 1.16
CNOT2-220ENST00000549750 SPATA31D1Q6ZQQ2 1576 aa22.31■■□□□ 1.16
CNOT2-220ENST00000549750 STRCQ7RTU9 1775 aa22.29■■□□□ 1.16
CNOT2-220ENST00000549750 C9orf84Q5VXU9 1444 aa22.29■■□□□ 1.16
CNOT2-220ENST00000549750 UHRF1BP1Q6BDS2 1440 aa22.28■■□□□ 1.16
CNOT2-220ENST00000549750 ARHGAP5Q13017 1502 aa22.27■■□□□ 1.16
CNOT2-220ENST00000549750 SETD1BQ9UPS6 1966 aaKnown RBP22.27■■□□□ 1.16
CNOT2-220ENST00000549750 CDC42BPBQ9Y5S2 1711 aa22.26■■□□□ 1.15
CNOT2-220ENST00000549750 PREX2Q70Z35 1606 aa22.26■■□□□ 1.15
CNOT2-220ENST00000549750 KDM5CP41229 1560 aa22.25■■□□□ 1.15
CNOT2-220ENST00000549750 PTPRTO14522 1441 aa22.25■■□□□ 1.15
CNOT2-220ENST00000549750 ZNF518AQ6AHZ1 1483 aa22.25■■□□□ 1.15
CNOT2-220ENST00000549750 ABCC1P33527 1531 aa22.19■■□□□ 1.14
CNOT2-220ENST00000549750 CDC42BPAQ5VT25 1732 aa22.19■■□□□ 1.14
CNOT2-220ENST00000549750 REREQ9P2R6 1566 aa22.16■■□□□ 1.14
CNOT2-220ENST00000549750 MLH3Q9UHC1 1453 aa22.16■■□□□ 1.14
CNOT2-220ENST00000549750 MYT1LQ9UL68 1186 aa22.16■■□□□ 1.14
CNOT2-220ENST00000549750 IQSEC2Q5JU85 1478 aa22.15■■□□□ 1.14
CNOT2-220ENST00000549750 ITSN2Q9NZM3 1697 aa22.15■■□□□ 1.14
CNOT2-220ENST00000549750 AFAP1Q8N556 730 aa22.15■■□□□ 1.14
CNOT2-220ENST00000549750 LTBP4Q8N2S1 1624 aa22.15■■□□□ 1.14
CNOT2-220ENST00000549750 ESF1Q9H501 851 aaKnown RBP22.14■■□□□ 1.13
CNOT2-220ENST00000549750 DIP2CQ9Y2E4 1556 aa22.13■■□□□ 1.13
CNOT2-220ENST00000549750 TRAPPC8Q9Y2L5 1435 aa22.11■■□□□ 1.13
CNOT2-220ENST00000549750 GPATCH8Q9UKJ3 1502 aaKnown RBP22.1■■□□□ 1.13
CNOT2-220ENST00000549750 ABCA6Q8N139 1617 aa22.09■■□□□ 1.13
CNOT2-220ENST00000549750 SAMD9LQ8IVG5 1584 aa22.08■■□□□ 1.12
CNOT2-220ENST00000549750 NCOA1Q15788 1441 aa22.07■■□□□ 1.12
CNOT2-220ENST00000549750 AGLP35573 1532 aa22.07■■□□□ 1.12
CNOT2-220ENST00000549750 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
CNOT2-220ENST00000549750 KIDINS220Q9ULH0 1771 aa22.05■■□□□ 1.12
CNOT2-220ENST00000549750 C3P01024 1663 aa22.05■■□□□ 1.12
CNOT2-220ENST00000549750 UBAP1LF5GYI3 381 aa22.05■■□□□ 1.12
CNOT2-220ENST00000549750 KIAA1107Q9UPP5 1409 aa22.03■■□□□ 1.12
CNOT2-220ENST00000549750 PLEKHH2Q8IVE3 1493 aa22.03■■□□□ 1.12
CNOT2-220ENST00000549750 EHBP1L1Q8N3D4 1523 aa22.02■■□□□ 1.12
CNOT2-220ENST00000549750 SYCP2Q9BX26 1530 aa22.01■■□□□ 1.11
CNOT2-220ENST00000549750 MTUS2Q5JR59 1369 aa22.01■■□□□ 1.11
CNOT2-220ENST00000549750 CNTLNQ9NXG0 1405 aa21.99■■□□□ 1.11
CNOT2-220ENST00000549750 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
CNOT2-220ENST00000549750 ZNF335Q9H4Z2 1342 aaPredicted RBP21.98■■□□□ 1.11
CNOT2-220ENST00000549750 TIAM1Q13009 1591 aa21.97■■□□□ 1.11
CNOT2-220ENST00000549750 NCKAP5LQ9HCH0 1330 aa21.97■■□□□ 1.11
CNOT2-220ENST00000549750 CFDP1Q9UEE9 299 aaPredicted RBP21.96■■□□□ 1.11
CNOT2-220ENST00000549750 INO80Q9ULG1 1556 aaPredicted RBP21.95■■□□□ 1.11
CNOT2-220ENST00000549750 CAMSAP1Q5T5Y3 1602 aa21.95■■□□□ 1.1
CNOT2-220ENST00000549750 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
CNOT2-220ENST00000549750 NPATQ14207 1427 aa21.94■■□□□ 1.1
CNOT2-220ENST00000549750 ATP7AQ04656 1500 aa21.93■■□□□ 1.1
CNOT2-220ENST00000549750 PKD2Q13563 968 aa21.92■■□□□ 1.1
CNOT2-220ENST00000549750 SPAG9O60271 1321 aaKnown RBP21.91■■□□□ 1.1
CNOT2-220ENST00000549750 PLXNC1O60486 1568 aa21.91■■□□□ 1.1
CNOT2-220ENST00000549750 ZMYM3Q14202 1370 aa21.9■■□□□ 1.1
CNOT2-220ENST00000549750 HNRNPMP52272 730 aaKnown RBP eCLIP21.9■■□□□ 1.11e-8■■■■□ 24.2
CNOT2-220ENST00000549750 SUPT6HQ7KZ85 1726 aaKnown RBP21.88■■□□□ 1.09
CNOT2-220ENST00000549750 MBD5Q9P267 1494 aa21.88■■□□□ 1.09
CNOT2-220ENST00000549750 VPS8Q8N3P4 1428 aa21.87■■□□□ 1.09
CNOT2-220ENST00000549750 MROH2AA6NES4 1674 aa21.86■■□□□ 1.09
CNOT2-220ENST00000549750 NCOA2Q15596 1464 aa21.85■■□□□ 1.09
CNOT2-220ENST00000549750 HSPA1LP34931 641 aa21.85■■□□□ 1.09
CNOT2-220ENST00000549750 ADGBQ8N7X0 1667 aa21.85■■□□□ 1.09
CNOT2-220ENST00000549750 A2MP01023 1474 aa21.84■■□□□ 1.09
CNOT2-220ENST00000549750 PLA2R1Q13018 1463 aa21.83■■□□□ 1.09
CNOT2-220ENST00000549750 RTEL1-TNFRSF6BF6WH68 1400 aa21.83■■□□□ 1.09
CNOT2-220ENST00000549750 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
CNOT2-220ENST00000549750 PPP6R1Q9UPN7 881 aa21.82■■□□□ 1.08
CNOT2-220ENST00000549750 ZNF644Q9H582 1327 aaPredicted RBP21.81■■□□□ 1.08
CNOT2-220ENST00000549750 MAP3K1Q13233 1512 aa21.81■■□□□ 1.08
CNOT2-220ENST00000549750 TCOF1Q13428 1488 aaKnown RBP21.8■■□□□ 1.08
CNOT2-220ENST00000549750 PIP4K2BP78356 416 aa21.8■■□□□ 1.08
CNOT2-220ENST00000549750 TOM1O60784 492 aa21.79■■□□□ 1.08
CNOT2-220ENST00000549750 MED1Q15648 1581 aaPredicted RBP21.78■■□□□ 1.08
CNOT2-220ENST00000549750 LRRC9Q6ZRR7 1453 aa21.78■■□□□ 1.08
CNOT2-220ENST00000549750 LOC105371045A0A1W2PR82 267 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms