RNA–Protein interactions for RNA: ENST00000549710.1

AC011601.1-201, humanhuman

TSL 3 BASIC

Gene AC011601.1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011601.1-201ENST00000549710 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
AC011601.1-201ENST00000549710 PSEN1P49768 467 aa11.64□□□□□ -0.55
AC011601.1-201ENST00000549710 FBXO22Q8NEZ5 403 aa11.64□□□□□ -0.55
AC011601.1-201ENST00000549710 PDE4AP27815 886 aa11.63□□□□□ -0.55
AC011601.1-201ENST00000549710 NLRP6P59044 892 aa11.63□□□□□ -0.55
AC011601.1-201ENST00000549710 MLLT3P42568 568 aaPredicted RBP11.62□□□□□ -0.55
AC011601.1-201ENST00000549710 MFSD10Q14728 455 aa11.62□□□□□ -0.55
AC011601.1-201ENST00000549710 HAX1O00165 279 aa11.6□□□□□ -0.55
AC011601.1-201ENST00000549710 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
AC011601.1-201ENST00000549710 RGS22Q8NE09 1264 aa11.59□□□□□ -0.55
AC011601.1-201ENST00000549710 A6NJR5 290 aa11.58□□□□□ -0.56
AC011601.1-201ENST00000549710 IGSF3O75054 1194 aa11.58□□□□□ -0.56
AC011601.1-201ENST00000549710 PHF8Q9UPP1 1060 aa11.58□□□□□ -0.56
AC011601.1-201ENST00000549710 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
AC011601.1-201ENST00000549710 TRAK2O60296 914 aa11.57□□□□□ -0.56
AC011601.1-201ENST00000549710 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
AC011601.1-201ENST00000549710 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
AC011601.1-201ENST00000549710 CAMK2BQ13554 666 aa11.56□□□□□ -0.56
AC011601.1-201ENST00000549710 DDRGK1Q96HY6 314 aa11.56□□□□□ -0.56
AC011601.1-201ENST00000549710 TSPYL2Q9H2G4 693 aaPredicted RBP11.56□□□□□ -0.56
AC011601.1-201ENST00000549710 SOX12O15370 315 aa11.55□□□□□ -0.56
AC011601.1-201ENST00000549710 CRISPLD2Q9H0B8 497 aa11.54□□□□□ -0.56
AC011601.1-201ENST00000549710 AEBP1Q8IUX7 1158 aa11.53□□□□□ -0.56
AC011601.1-201ENST00000549710 TMCO4Q5TGY1 634 aa11.52□□□□□ -0.57
AC011601.1-201ENST00000549710 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.57
AC011601.1-201ENST00000549710 CLUAP1Q96AJ1 413 aa11.52□□□□□ -0.57
AC011601.1-201ENST00000549710 ONECUT3O60422 494 aaPredicted RBP11.51□□□□□ -0.57
AC011601.1-201ENST00000549710 HMGB1P09429 215 aaKnown RBP11.51□□□□□ -0.57
AC011601.1-201ENST00000549710 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
AC011601.1-201ENST00000549710 MTMR7Q9Y216 660 aa11.51□□□□□ -0.57
AC011601.1-201ENST00000549710 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
AC011601.1-201ENST00000549710 MFAP1P55081 439 aaKnown RBP11.45□□□□□ -0.58
AC011601.1-201ENST00000549710 MINK1Q8N4C8 1332 aaPredicted RBP11.44□□□□□ -0.58
AC011601.1-201ENST00000549710 GPR37O15354 613 aa11.44□□□□□ -0.58
AC011601.1-201ENST00000549710 RBM25P49756 843 aaKnown RBP11.44□□□□□ -0.58
AC011601.1-201ENST00000549710 PARP9Q8IXQ6 854 aa11.43□□□□□ -0.58
AC011601.1-201ENST00000549710 CCDC102AQ96A19 550 aa11.42□□□□□ -0.58
AC011601.1-201ENST00000549710 GZF1Q9H116 711 aaPredicted RBP11.42□□□□□ -0.58
AC011601.1-201ENST00000549710 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
AC011601.1-201ENST00000549710 SERPINA10Q9UK55 444 aa11.42□□□□□ -0.58
AC011601.1-201ENST00000549710 AMHR2Q16671 573 aa11.41□□□□□ -0.58
AC011601.1-201ENST00000549710 FOXD4L5Q5VV16 416 aaPredicted RBP11.4□□□□□ -0.58
AC011601.1-201ENST00000549710 FOXD4L4Q8WXT5 416 aaPredicted RBP11.4□□□□□ -0.58
AC011601.1-201ENST00000549710 CCDC97Q96F63 343 aaPredicted RBP11.4□□□□□ -0.58
AC011601.1-201ENST00000549710 EVX2Q03828 476 aa11.39□□□□□ -0.59
AC011601.1-201ENST00000549710 MAP2K5Q13163 448 aa11.39□□□□□ -0.59
AC011601.1-201ENST00000549710 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
AC011601.1-201ENST00000549710 MS4A4AQ96JQ5 239 aa11.39□□□□□ -0.59
AC011601.1-201ENST00000549710 ZNF777Q9ULD5 760 aaPredicted RBP11.39□□□□□ -0.59
AC011601.1-201ENST00000549710 HSP90B1P14625 803 aaKnown RBP11.38□□□□□ -0.59
AC011601.1-201ENST00000549710 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
AC011601.1-201ENST00000549710 PLSCR2Q9NRY7 297 aa11.38□□□□□ -0.59
AC011601.1-201ENST00000549710 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
AC011601.1-201ENST00000549710 SPDYE16A6NNV3 312 aaPredicted RBP11.37□□□□□ -0.59
AC011601.1-201ENST00000549710 IRF6O14896 467 aa11.37□□□□□ -0.59
AC011601.1-201ENST00000549710 CDK11BP21127 795 aaKnown RBP11.37□□□□□ -0.59
AC011601.1-201ENST00000549710 PCMTD1Q96MG8 357 aaPredicted RBP11.37□□□□□ -0.59
AC011601.1-201ENST00000549710 CDK11AQ9UQ88 783 aaPredicted RBP11.37□□□□□ -0.59
AC011601.1-201ENST00000549710 DPYSL4O14531 572 aa11.36□□□□□ -0.59
AC011601.1-201ENST00000549710 MCM6Q14566 821 aa11.36□□□□□ -0.59
AC011601.1-201ENST00000549710 LHX8Q68G74 356 aa11.36□□□□□ -0.59
AC011601.1-201ENST00000549710 IFNL1Q8IU54 200 aa11.36□□□□□ -0.59
AC011601.1-201ENST00000549710 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
AC011601.1-201ENST00000549710 EIF5BO60841 1220 aaKnown RBP11.35□□□□□ -0.59
AC011601.1-201ENST00000549710 PROSER2Q86WR7 435 aaPredicted RBP11.35□□□□□ -0.59
AC011601.1-201ENST00000549710 E9PSI1 815 aa11.34□□□□□ -0.59
AC011601.1-201ENST00000549710 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
AC011601.1-201ENST00000549710 PDIA6Q15084 440 aa11.33□□□□□ -0.6
AC011601.1-201ENST00000549710 RETREG2Q8NC44 543 aa11.33□□□□□ -0.6
AC011601.1-201ENST00000549710 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
AC011601.1-201ENST00000549710 PUS7Q96PZ0 661 aaKnown RBP11.31□□□□□ -0.6
AC011601.1-201ENST00000549710 TTLL12Q14166 644 aaPredicted RBP11.3□□□□□ -0.6
AC011601.1-201ENST00000549710 EMILIN3Q9NT22 766 aa11.3□□□□□ -0.6
AC011601.1-201ENST00000549710 PITPNM1O00562 1244 aa11.29□□□□□ -0.6
AC011601.1-201ENST00000549710 FBXW7Q969H0 707 aa11.28□□□□□ -0.6
AC011601.1-201ENST00000549710 IRF5Q13568 498 aa11.27□□□□□ -0.61
AC011601.1-201ENST00000549710 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
AC011601.1-201ENST00000549710 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
AC011601.1-201ENST00000549710 GNPATO15228 680 aa11.26□□□□□ -0.61
AC011601.1-201ENST00000549710 POM121Q96HA1 1249 aa11.26□□□□□ -0.61
AC011601.1-201ENST00000549710 MAP3K13O43283 966 aa11.25□□□□□ -0.61
AC011601.1-201ENST00000549710 MS4A1P11836 297 aa11.25□□□□□ -0.61
AC011601.1-201ENST00000549710 GPHNQ9NQX3 736 aaPredicted RBP11.25□□□□□ -0.61
AC011601.1-201ENST00000549710 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
AC011601.1-201ENST00000549710 GIGYF2Q6Y7W6 1299 aaKnown RBP11.24□□□□□ -0.61
AC011601.1-201ENST00000549710 GRXCR2A6NFK2 248 aa11.22□□□□□ -0.61
AC011601.1-201ENST00000549710 PATL2C9JE40 543 aaKnown RBP11.22□□□□□ -0.61
AC011601.1-201ENST00000549710 FECHP22830 423 aa11.22□□□□□ -0.61
AC011601.1-201ENST00000549710 SH3D19Q5HYK7 790 aa11.22□□□□□ -0.61
AC011601.1-201ENST00000549710 PDE4CQ08493 712 aa11.21□□□□□ -0.61
AC011601.1-201ENST00000549710 HIC1Q14526 733 aa11.2□□□□□ -0.62
AC011601.1-201ENST00000549710 FCHSD2O94868 740 aa11.19□□□□□ -0.62
AC011601.1-201ENST00000549710 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
AC011601.1-201ENST00000549710 PPP1R15AO75807 674 aaPredicted RBP11.17□□□□□ -0.62
AC011601.1-201ENST00000549710 GOLGA2Q08379 1002 aa11.17□□□□□ -0.62
AC011601.1-201ENST00000549710 DSG2Q14126 1118 aa11.17□□□□□ -0.62
AC011601.1-201ENST00000549710 OXER1Q8TDS5 423 aa11.16□□□□□ -0.62
AC011601.1-201ENST00000549710 REPIN1Q9BWE0 567 aaKnown RBP11.15□□□□□ -0.62
AC011601.1-201ENST00000549710 USP35Q9P2H5 1018 aa11.15□□□□□ -0.62
AC011601.1-201ENST00000549710 AMOTL2Q9Y2J4 779 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms