RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 CFAP44Q96MT7 982 aa12.04□□□□□ -0.48
COX6A1-202ENST00000549525 SHROOM4Q9ULL8 1493 aa12.01□□□□□ -0.49
COX6A1-202ENST00000549525 G3V3G9 751 aa11.99□□□□□ -0.49
COX6A1-202ENST00000549525 MAMSTRQ6ZN01 415 aa11.99□□□□□ -0.49
COX6A1-202ENST00000549525 UNC13AQ9UPW8 1703 aa11.99□□□□□ -0.49
COX6A1-202ENST00000549525 SCUBE2Q9NQ36 999 aa11.98□□□□□ -0.49
COX6A1-202ENST00000549525 C3orf67Q6ZVT6 689 aa11.97□□□□□ -0.49
COX6A1-202ENST00000549525 PLCB2Q00722 1185 aa11.96□□□□□ -0.49
COX6A1-202ENST00000549525 TMEM92Q6UXU6 159 aa11.96□□□□□ -0.49
COX6A1-202ENST00000549525 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.95□□□□□ -0.5
COX6A1-202ENST00000549525 BICRAQ9NZM4 1560 aa11.93□□□□□ -0.5
COX6A1-202ENST00000549525 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
COX6A1-202ENST00000549525 SLAIN1Q8ND83 568 aa11.9□□□□□ -0.5
COX6A1-202ENST00000549525 KIF3CO14782 793 aa11.87□□□□□ -0.51
COX6A1-202ENST00000549525 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
COX6A1-202ENST00000549525 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
COX6A1-202ENST00000549525 C2orf72A6NCS6 295 aa11.85□□□□□ -0.51
COX6A1-202ENST00000549525 CRISPLD2Q9H0B8 497 aa11.84□□□□□ -0.51
COX6A1-202ENST00000549525 GPHNQ9NQX3 736 aaPredicted RBP11.82□□□□□ -0.52
COX6A1-202ENST00000549525 TMC2Q8TDI7 906 aa11.81□□□□□ -0.52
COX6A1-202ENST00000549525 PDE4AP27815 886 aa11.76□□□□□ -0.53
COX6A1-202ENST00000549525 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
COX6A1-202ENST00000549525 DSG2Q14126 1118 aa11.76□□□□□ -0.53
COX6A1-202ENST00000549525 LARP6Q9BRS8 491 aaKnown RBP11.76□□□□□ -0.53
COX6A1-202ENST00000549525 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
COX6A1-202ENST00000549525 FOXK1P85037 733 aa11.74□□□□□ -0.53
COX6A1-202ENST00000549525 MFSD10Q14728 455 aa11.74□□□□□ -0.53
COX6A1-202ENST00000549525 PPP1R15BQ5SWA1 713 aa11.71□□□□□ -0.53
COX6A1-202ENST00000549525 PLPP6Q8IY26 295 aa11.71□□□□□ -0.53
COX6A1-202ENST00000549525 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
COX6A1-202ENST00000549525 BAZ1AQ9NRL2 1556 aaPredicted RBP11.69□□□□□ -0.54
COX6A1-202ENST00000549525 EIF4G1Q04637 1599 aaKnown RBP11.67□□□□□ -0.54
COX6A1-202ENST00000549525 LCE2DQ5TA82 110 aaPredicted RBP11.66□□□□□ -0.54
COX6A1-202ENST00000549525 SNPHO15079 494 aa11.65□□□□□ -0.54
COX6A1-202ENST00000549525 KDM2AQ9Y2K7 1162 aa11.65□□□□□ -0.54
COX6A1-202ENST00000549525 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
COX6A1-202ENST00000549525 CECR2Q9BXF3 1484 aa11.63□□□□□ -0.55
COX6A1-202ENST00000549525 SLC34A2O95436 690 aa11.62□□□□□ -0.55
COX6A1-202ENST00000549525 FAM163AQ96GL9 167 aaPredicted RBP11.62□□□□□ -0.55
COX6A1-202ENST00000549525 ST18O60284 1047 aa11.61□□□□□ -0.55
COX6A1-202ENST00000549525 CAMK2BQ13554 666 aa11.61□□□□□ -0.55
COX6A1-202ENST00000549525 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
COX6A1-202ENST00000549525 SMARCA4P51532 1647 aa11.6□□□□□ -0.55
COX6A1-202ENST00000549525 GPR153Q6NV75 609 aa11.58□□□□□ -0.56
COX6A1-202ENST00000549525 PTCD2Q8WV60 388 aaKnown RBP11.58□□□□□ -0.56
COX6A1-202ENST00000549525 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
COX6A1-202ENST00000549525 OXER1Q8TDS5 423 aa11.57□□□□□ -0.56
COX6A1-202ENST00000549525 WDR70Q9NW82 654 aa11.57□□□□□ -0.56
COX6A1-202ENST00000549525 PCDHGA4Q9Y5G9 962 aa11.57□□□□□ -0.56
COX6A1-202ENST00000549525 SMARCA2P51531 1590 aa11.57□□□□□ -0.56
COX6A1-202ENST00000549525 VSIG10Q8N0Z9 540 aa11.56□□□□□ -0.56
COX6A1-202ENST00000549525 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.56
COX6A1-202ENST00000549525 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
COX6A1-202ENST00000549525 E2F4Q16254 413 aa11.55□□□□□ -0.56
COX6A1-202ENST00000549525 ARSIQ5FYB1 569 aa11.55□□□□□ -0.56
COX6A1-202ENST00000549525 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
COX6A1-202ENST00000549525 PLSCR2Q9NRY7 297 aa11.55□□□□□ -0.56
COX6A1-202ENST00000549525 CC2D2AQ9P2K1 1620 aa11.55□□□□□ -0.56
COX6A1-202ENST00000549525 MROH2BQ7Z745 1585 aa11.54□□□□□ -0.56
COX6A1-202ENST00000549525 RSF1Q96T23 1441 aaPredicted RBP11.54□□□□□ -0.56
COX6A1-202ENST00000549525 RIMBP2O15034 1052 aa11.54□□□□□ -0.56
COX6A1-202ENST00000549525 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
COX6A1-202ENST00000549525 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
COX6A1-202ENST00000549525 ATAD2BQ9ULI0 1458 aa11.51□□□□□ -0.57
COX6A1-202ENST00000549525 PEG3Q9GZU2 1588 aa11.51□□□□□ -0.57
COX6A1-202ENST00000549525 KDM4FA0A1W2PPD8 638 aa11.51□□□□□ -0.57
COX6A1-202ENST00000549525 KCNV2Q8TDN2 545 aa11.51□□□□□ -0.57
COX6A1-202ENST00000549525 MARVELD3Q96A59 401 aa11.5□□□□□ -0.57
COX6A1-202ENST00000549525 DPYSL4O14531 572 aa11.48□□□□□ -0.57
COX6A1-202ENST00000549525 NUDT7P0C024 238 aa11.48□□□□□ -0.57
COX6A1-202ENST00000549525 SLC24A1O60721 1099 aa11.47□□□□□ -0.57
COX6A1-202ENST00000549525 BAZ1BQ9UIG0 1483 aaKnown RBP11.46□□□□□ -0.57
COX6A1-202ENST00000549525 SUPT5HO00267 1087 aaKnown RBP11.46□□□□□ -0.57
COX6A1-202ENST00000549525 ARIH1Q9Y4X5 557 aaPredicted RBP11.46□□□□□ -0.57
COX6A1-202ENST00000549525 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
COX6A1-202ENST00000549525 TBC1D12O60347 775 aa11.45□□□□□ -0.58
COX6A1-202ENST00000549525 POTEMA6NI47 508 aa11.44□□□□□ -0.58
COX6A1-202ENST00000549525 EMP3P54852 163 aa11.44□□□□□ -0.58
COX6A1-202ENST00000549525 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
COX6A1-202ENST00000549525 EVI5O60447 810 aa11.42□□□□□ -0.58
COX6A1-202ENST00000549525 WIZO95785 1651 aa11.41□□□□□ -0.58
COX6A1-202ENST00000549525 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
COX6A1-202ENST00000549525 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
COX6A1-202ENST00000549525 POTEGQ6S5H5 508 aa11.41□□□□□ -0.58
COX6A1-202ENST00000549525 P3H3Q8IVL6 736 aa11.4□□□□□ -0.58
COX6A1-202ENST00000549525 ARHGEF1Q92888 912 aaKnown RBP11.4□□□□□ -0.58
COX6A1-202ENST00000549525 ANO8Q9HCE9 1232 aaPredicted RBP11.4□□□□□ -0.58
COX6A1-202ENST00000549525 LHX6Q9UPM6 363 aa11.4□□□□□ -0.58
COX6A1-202ENST00000549525 PDIA6Q15084 440 aa11.39□□□□□ -0.59
COX6A1-202ENST00000549525 FAM205CA6NFA0 338 aa11.38□□□□□ -0.59
COX6A1-202ENST00000549525 ZNF316A6NFI3 1004 aaPredicted RBP11.38□□□□□ -0.59
COX6A1-202ENST00000549525 ERBB3P21860 1342 aa11.36□□□□□ -0.59
COX6A1-202ENST00000549525 TOP2AP11388 1531 aaKnown RBP11.36□□□□□ -0.59
COX6A1-202ENST00000549525 VARS2Q5ST30 1063 aaKnown RBP11.36□□□□□ -0.59
COX6A1-202ENST00000549525 HS3ST6Q96QI5 342 aa11.36□□□□□ -0.59
COX6A1-202ENST00000549525 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
COX6A1-202ENST00000549525 PTGER2P43116 358 aa11.3□□□□□ -0.6
COX6A1-202ENST00000549525 FOSBP53539 338 aa11.3□□□□□ -0.6
COX6A1-202ENST00000549525 JPH4Q96JJ6 628 aa11.29□□□□□ -0.6
COX6A1-202ENST00000549525 ZNF454Q8N9F8 522 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms