RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 EHBP1L1Q8N3D4 1523 aa18.83■□□□□ 0.6
RAB5C-204ENST00000547517 RICTORQ6R327 1708 aa18.82■□□□□ 0.6
RAB5C-204ENST00000547517 CDC42BPBQ9Y5S2 1711 aa18.8■□□□□ 0.6
RAB5C-204ENST00000547517 TIAM1Q13009 1591 aa18.8■□□□□ 0.6
RAB5C-204ENST00000547517 CDC42BPAQ5VT25 1732 aa18.8■□□□□ 0.6
RAB5C-204ENST00000547517 EFCAB2Q5VUJ9 269 aa18.79■□□□□ 0.6
RAB5C-204ENST00000547517 SCAPERQ9BY12 1400 aa18.78■□□□□ 0.6
RAB5C-204ENST00000547517 POGZQ7Z3K3 1410 aa18.77■□□□□ 0.6
RAB5C-204ENST00000547517 ZMYM4Q5VZL5 1548 aa18.76■□□□□ 0.59
RAB5C-204ENST00000547517 ARHGEF40Q8TER5 1519 aa18.75■□□□□ 0.59
RAB5C-204ENST00000547517 ABCC1P33527 1531 aa18.74■□□□□ 0.59
RAB5C-204ENST00000547517 GPATCH8Q9UKJ3 1502 aaKnown RBP18.74■□□□□ 0.59
RAB5C-204ENST00000547517 CCNB3Q8WWL7 1395 aa18.73■□□□□ 0.59
RAB5C-204ENST00000547517 SUPT6HQ7KZ85 1726 aaKnown RBP18.71■□□□□ 0.59
RAB5C-204ENST00000547517 ZFYVE16Q7Z3T8 1539 aa18.71■□□□□ 0.59
RAB5C-204ENST00000547517 KDM4FA0A1W2PPD8 638 aa18.71■□□□□ 0.59
RAB5C-204ENST00000547517 ZNF518AQ6AHZ1 1483 aa18.71■□□□□ 0.59
RAB5C-204ENST00000547517 ITSN2Q9NZM3 1697 aa18.7■□□□□ 0.58
RAB5C-204ENST00000547517 SAMD9LQ8IVG5 1584 aa18.7■□□□□ 0.58
RAB5C-204ENST00000547517 YEATS2Q9ULM3 1422 aa18.69■□□□□ 0.58
RAB5C-204ENST00000547517 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
RAB5C-204ENST00000547517 LRRC9Q6ZRR7 1453 aa18.69■□□□□ 0.58
RAB5C-204ENST00000547517 MAP3K1Q13233 1512 aa18.69■□□□□ 0.58
RAB5C-204ENST00000547517 ZNF777Q9ULD5 760 aaPredicted RBP18.68■□□□□ 0.58
RAB5C-204ENST00000547517 ARHGEF12Q9NZN5 1544 aa18.68■□□□□ 0.58
RAB5C-204ENST00000547517 KDM5CP41229 1560 aa18.68■□□□□ 0.58
RAB5C-204ENST00000547517 MAGI2Q86UL8 1455 aa18.67■□□□□ 0.58
RAB5C-204ENST00000547517 SYCP2Q9BX26 1530 aa18.67■□□□□ 0.58
RAB5C-204ENST00000547517 CFDP1Q9UEE9 299 aaPredicted RBP18.66■□□□□ 0.58
RAB5C-204ENST00000547517 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
RAB5C-204ENST00000547517 HECW2Q9P2P5 1572 aa18.65■□□□□ 0.58
RAB5C-204ENST00000547517 AFAP1Q8N556 730 aa18.64■□□□□ 0.57
RAB5C-204ENST00000547517 KANK4Q5T7N3 995 aaPredicted RBP18.62■□□□□ 0.57
RAB5C-204ENST00000547517 PLEKHH2Q8IVE3 1493 aa18.62■□□□□ 0.57
RAB5C-204ENST00000547517 ARID4BQ4LE39 1312 aaPredicted RBP18.61■□□□□ 0.57
RAB5C-204ENST00000547517 APLP2Q06481 763 aa18.61■□□□□ 0.57
RAB5C-204ENST00000547517 SIGLEC1Q9BZZ2 1709 aa18.6■□□□□ 0.57
RAB5C-204ENST00000547517 MYT1LQ9UL68 1186 aa18.6■□□□□ 0.57
RAB5C-204ENST00000547517 KIAA1107Q9UPP5 1409 aa18.59■□□□□ 0.57
RAB5C-204ENST00000547517 BCORL1Q5H9F3 1711 aa18.59■□□□□ 0.57
RAB5C-204ENST00000547517 ABCA6Q8N139 1617 aa18.59■□□□□ 0.57
RAB5C-204ENST00000547517 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
RAB5C-204ENST00000547517 MLH3Q9UHC1 1453 aa18.58■□□□□ 0.57
RAB5C-204ENST00000547517 C9orf84Q5VXU9 1444 aa18.58■□□□□ 0.57
RAB5C-204ENST00000547517 ATP10AO60312 1499 aa18.58■□□□□ 0.56
RAB5C-204ENST00000547517 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
RAB5C-204ENST00000547517 HNRNPMP52272 730 aaKnown RBP eCLIP18.57■□□□□ 0.56
RAB5C-204ENST00000547517 CAMSAP2Q08AD1 1489 aa18.57■□□□□ 0.56
RAB5C-204ENST00000547517 ADAMTSL3P82987 1691 aa18.56■□□□□ 0.56
RAB5C-204ENST00000547517 KIDINS220Q9ULH0 1771 aa18.55■□□□□ 0.56
RAB5C-204ENST00000547517 MADDQ8WXG6 1647 aa18.54■□□□□ 0.56
RAB5C-204ENST00000547517 INO80Q9ULG1 1556 aaPredicted RBP18.53■□□□□ 0.56
RAB5C-204ENST00000547517 ATP7AQ04656 1500 aa18.53■□□□□ 0.56
RAB5C-204ENST00000547517 MYOM3Q5VTT5 1437 aa18.52■□□□□ 0.56
RAB5C-204ENST00000547517 MBD5Q9P267 1494 aa18.52■□□□□ 0.55
RAB5C-204ENST00000547517 SPAG9O60271 1321 aaKnown RBP18.51■□□□□ 0.55
RAB5C-204ENST00000547517 REREQ9P2R6 1566 aa18.51■□□□□ 0.55
RAB5C-204ENST00000547517 MLECQ14165 292 aa18.49■□□□□ 0.55
RAB5C-204ENST00000547517 CCDC141Q6ZP82 1450 aa18.49■□□□□ 0.55
RAB5C-204ENST00000547517 RIMS1Q86UR5 1692 aaKnown RBP18.48■□□□□ 0.55
RAB5C-204ENST00000547517 MIA2Q96PC5 1412 aa18.47■□□□□ 0.55
RAB5C-204ENST00000547517 PTPRMP28827 1452 aa18.46■□□□□ 0.55
RAB5C-204ENST00000547517 FER1L4A9Z1Z3 1794 aa18.46■□□□□ 0.55
RAB5C-204ENST00000547517 ARHGEF5Q12774 1597 aa18.46■□□□□ 0.55
RAB5C-204ENST00000547517 AGLP35573 1532 aa18.44■□□□□ 0.54
RAB5C-204ENST00000547517 PLXNC1O60486 1568 aa18.42■□□□□ 0.54
RAB5C-204ENST00000547517 PTPN23Q9H3S7 1636 aa18.42■□□□□ 0.54
RAB5C-204ENST00000547517 RTEL1-TNFRSF6BF6WH68 1400 aa18.41■□□□□ 0.54
RAB5C-204ENST00000547517 FGD6Q6ZV73 1430 aa18.41■□□□□ 0.54
RAB5C-204ENST00000547517 ADGBQ8N7X0 1667 aa18.41■□□□□ 0.54
RAB5C-204ENST00000547517 A2MP01023 1474 aa18.41■□□□□ 0.54
RAB5C-204ENST00000547517 RSPH4AQ5TD94 716 aa18.38■□□□□ 0.53
RAB5C-204ENST00000547517 PLPPR3Q6T4P5 718 aa18.37■□□□□ 0.53
RAB5C-204ENST00000547517 TCOF1Q13428 1488 aaKnown RBP18.37■□□□□ 0.53
RAB5C-204ENST00000547517 MAST1Q9Y2H9 1570 aa18.37■□□□□ 0.53
RAB5C-204ENST00000547517 CROCC2H7BZ55 1655 aa18.36■□□□□ 0.53
RAB5C-204ENST00000547517 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
RAB5C-204ENST00000547517 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
RAB5C-204ENST00000547517 DNMT1P26358 1616 aaKnown RBP18.33■□□□□ 0.52
RAB5C-204ENST00000547517 PPARGC1BQ86YN6 1023 aaKnown RBP18.32■□□□□ 0.52
RAB5C-204ENST00000547517 SHANK2Q9UPX8 1470 aa18.32■□□□□ 0.52
RAB5C-204ENST00000547517 ABCC5O15440 1437 aa18.32■□□□□ 0.52
RAB5C-204ENST00000547517 DAPK1P53355 1430 aa18.32■□□□□ 0.52
RAB5C-204ENST00000547517 DHX29Q7Z478 1369 aaKnown RBP18.31■□□□□ 0.52
RAB5C-204ENST00000547517 ESF1Q9H501 851 aaKnown RBP18.3■□□□□ 0.52
RAB5C-204ENST00000547517 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
RAB5C-204ENST00000547517 CNTLNQ9NXG0 1405 aa18.28■□□□□ 0.52
RAB5C-204ENST00000547517 C3P01024 1663 aa18.28■□□□□ 0.52
RAB5C-204ENST00000547517 GGT6Q6P531 493 aa18.27■□□□□ 0.52
RAB5C-204ENST00000547517 CLTCQ00610 1675 aaKnown RBP18.27■□□□□ 0.52
RAB5C-204ENST00000547517 CEBPAP49715 358 aaPredicted RBP18.26■□□□□ 0.51
RAB5C-204ENST00000547517 MROH2AA6NES4 1674 aa18.25■□□□□ 0.51
RAB5C-204ENST00000547517 LMTK3Q96Q04 1460 aa18.25■□□□□ 0.51
RAB5C-204ENST00000547517 KIF3BO15066 747 aa18.24■□□□□ 0.51
RAB5C-204ENST00000547517 DUOX2Q9NRD8 1548 aa18.23■□□□□ 0.51
RAB5C-204ENST00000547517 EIF2AK4Q9P2K8 1649 aaKnown RBP18.23■□□□□ 0.51
RAB5C-204ENST00000547517 KIF15Q9NS87 1388 aa18.23■□□□□ 0.51
RAB5C-204ENST00000547517 RNF17Q9BXT8 1623 aaKnown RBP18.21■□□□□ 0.51
RAB5C-204ENST00000547517 KDM5DQ9BY66 1539 aa18.21■□□□□ 0.51
RAB5C-204ENST00000547517 PREX1Q8TCU6 1659 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms