RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 RAPGEF6Q8TEU7 1601 aa14.65□□□□□ -0.06
NPAS3-205ENST00000547068 UACAQ9BZF9 1416 aa14.65□□□□□ -0.06
NPAS3-205ENST00000547068 PHLDB1Q86UU1 1377 aa14.65□□□□□ -0.06
NPAS3-205ENST00000547068 MAP3K1Q13233 1512 aa14.64□□□□□ -0.07
NPAS3-205ENST00000547068 RIMBP3CA6NJZ7 1639 aa14.64□□□□□ -0.07
NPAS3-205ENST00000547068 RIMBP3BA6NNM3 1639 aa14.64□□□□□ -0.07
NPAS3-205ENST00000547068 RIMBP3Q9UFD9 1639 aa14.64□□□□□ -0.07
NPAS3-205ENST00000547068 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
NPAS3-205ENST00000547068 CYB5RLQ6IPT4 315 aa14.62□□□□□ -0.07
NPAS3-205ENST00000547068 LRRC9Q6ZRR7 1453 aa14.62□□□□□ -0.07
NPAS3-205ENST00000547068 ABCA8O94911 1581 aa14.62□□□□□ -0.07
NPAS3-205ENST00000547068 ARID3CA6NKF2 412 aa14.61□□□□□ -0.07
NPAS3-205ENST00000547068 ANP32AP39687 249 aaKnown RBP14.6□□□□□ -0.07
NPAS3-205ENST00000547068 IPO9Q96P70 1041 aaKnown RBP14.6□□□□□ -0.07
NPAS3-205ENST00000547068 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
NPAS3-205ENST00000547068 NUP153P49790 1475 aaKnown RBP14.59□□□□□ -0.07
NPAS3-205ENST00000547068 ABCC2Q92887 1545 aa14.59□□□□□ -0.07
NPAS3-205ENST00000547068 NPM1P06748 294 aaKnown RBP eCLIP14.58□□□□□ -0.07
NPAS3-205ENST00000547068 EPRSP07814 1512 aaKnown RBP14.58□□□□□ -0.08
NPAS3-205ENST00000547068 UHRF1BP1LA0JNW5 1464 aa14.58□□□□□ -0.08
NPAS3-205ENST00000547068 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
NPAS3-205ENST00000547068 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
NPAS3-205ENST00000547068 IL27Q8NEV9 243 aa14.57□□□□□ -0.08
NPAS3-205ENST00000547068 CCDC184Q52MB2 194 aa14.55□□□□□ -0.08
NPAS3-205ENST00000547068 FAM9BQ8IZU0 186 aa14.55□□□□□ -0.08
NPAS3-205ENST00000547068 ZBED9Q6R2W3 1325 aa14.55□□□□□ -0.08
NPAS3-205ENST00000547068 WASHC2AQ641Q2 1341 aa14.54□□□□□ -0.08
NPAS3-205ENST00000547068 LRRIQ1Q96JM4 1722 aa14.54□□□□□ -0.08
NPAS3-205ENST00000547068 ATP10BO94823 1461 aa14.54□□□□□ -0.08
NPAS3-205ENST00000547068 PLEKHD1A6NEE1 506 aa14.54□□□□□ -0.08
NPAS3-205ENST00000547068 CDK13Q14004 1512 aaKnown RBP14.54□□□□□ -0.08
NPAS3-205ENST00000547068 CCDC136Q96JN2 1154 aa14.53□□□□□ -0.08
NPAS3-205ENST00000547068 MTUS2Q5JR59 1369 aa14.52□□□□□ -0.08
NPAS3-205ENST00000547068 ADCY10Q96PN6 1610 aa14.52□□□□□ -0.08
NPAS3-205ENST00000547068 RTN4Q9NQC3 1192 aaKnown RBP14.52□□□□□ -0.08
NPAS3-205ENST00000547068 CFAP43Q8NDM7 1665 aa14.52□□□□□ -0.09
NPAS3-205ENST00000547068 KDM5BQ9UGL1 1544 aa14.51□□□□□ -0.09
NPAS3-205ENST00000547068 HSPA5P11021 654 aaKnown RBP14.5□□□□□ -0.09
NPAS3-205ENST00000547068 MRS2Q9HD23 443 aa14.5□□□□□ -0.09
NPAS3-205ENST00000547068 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
NPAS3-205ENST00000547068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.48□□□□□ -0.09
NPAS3-205ENST00000547068 ZCCHC11Q5TAX3 1644 aaKnown RBP14.48□□□□□ -0.09
NPAS3-205ENST00000547068 PRKRIP1Q9H875 184 aaPredicted RBP14.48□□□□□ -0.09
NPAS3-205ENST00000547068 NCOA2Q15596 1464 aa14.47□□□□□ -0.09
NPAS3-205ENST00000547068 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.46□□□□□ -0.1
NPAS3-205ENST00000547068 EHBP1L1Q8N3D4 1523 aa14.45□□□□□ -0.1
NPAS3-205ENST00000547068 EIF4G2P78344 907 aaKnown RBP eCLIP14.45□□□□□ -0.1
NPAS3-205ENST00000547068 TROQ12816 1431 aaPredicted RBP14.44□□□□□ -0.1
NPAS3-205ENST00000547068 AKNAQ7Z591 1439 aa14.43□□□□□ -0.1
NPAS3-205ENST00000547068 MAGI3Q5TCQ9 1506 aa14.43□□□□□ -0.1
NPAS3-205ENST00000547068 SMG6Q86US8 1419 aaKnown RBP14.42□□□□□ -0.1
NPAS3-205ENST00000547068 USP35Q9P2H5 1018 aa14.42□□□□□ -0.1
NPAS3-205ENST00000547068 SUPT6HQ7KZ85 1726 aaKnown RBP14.41□□□□□ -0.1
NPAS3-205ENST00000547068 HFM1A2PYH4 1435 aa14.41□□□□□ -0.1
NPAS3-205ENST00000547068 NEFMP07197 916 aa14.41□□□□□ -0.1
NPAS3-205ENST00000547068 ASXL2Q76L83 1435 aa14.41□□□□□ -0.1
NPAS3-205ENST00000547068 UBE2Q2Q8WVN8 375 aa14.4□□□□□ -0.1
NPAS3-205ENST00000547068 PTPN23Q9H3S7 1636 aa14.39□□□□□ -0.11
NPAS3-205ENST00000547068 WDR7Q9Y4E6 1490 aa14.39□□□□□ -0.11
NPAS3-205ENST00000547068 NPM2Q86SE8 214 aaKnown RBP14.39□□□□□ -0.11
NPAS3-205ENST00000547068 NUDCQ9Y266 331 aa14.39□□□□□ -0.11
NPAS3-205ENST00000547068 RNF123Q5XPI4 1314 aa14.38□□□□□ -0.11
NPAS3-205ENST00000547068 LAS1LQ9Y4W2 734 aaKnown RBP14.38□□□□□ -0.11
NPAS3-205ENST00000547068 FGD6Q6ZV73 1430 aa14.38□□□□□ -0.11
NPAS3-205ENST00000547068 KIF14Q15058 1648 aa14.38□□□□□ -0.11
NPAS3-205ENST00000547068 C11orf95C9JLR9 678 aaPredicted RBP14.38□□□□□ -0.11
NPAS3-205ENST00000547068 CCDC7Q96M83 1385 aa14.37□□□□□ -0.11
NPAS3-205ENST00000547068 WASHC2CQ9Y4E1 1318 aa14.36□□□□□ -0.11
NPAS3-205ENST00000547068 PTPRKQ15262 1439 aa14.36□□□□□ -0.11
NPAS3-205ENST00000547068 NCOA1Q15788 1441 aa14.36□□□□□ -0.11
NPAS3-205ENST00000547068 NAIPQ13075 1403 aa14.34□□□□□ -0.11
NPAS3-205ENST00000547068 PPM1GO15355 546 aaPredicted RBP14.33□□□□□ -0.12
NPAS3-205ENST00000547068 MYOM3Q5VTT5 1437 aa14.31□□□□□ -0.12
NPAS3-205ENST00000547068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.31□□□□□ -0.12
NPAS3-205ENST00000547068 CFDP1Q9UEE9 299 aaPredicted RBP14.31□□□□□ -0.12
NPAS3-205ENST00000547068 ABCC10Q5T3U5 1492 aa14.3□□□□□ -0.12
NPAS3-205ENST00000547068 TCERG1O14776 1098 aaKnown RBP14.3□□□□□ -0.12
NPAS3-205ENST00000547068 GPATCH8Q9UKJ3 1502 aaKnown RBP14.29□□□□□ -0.12
NPAS3-205ENST00000547068 PDE4AP27815 886 aa14.29□□□□□ -0.12
NPAS3-205ENST00000547068 FAM69CQ0P6D2 419 aa14.29□□□□□ -0.12
NPAS3-205ENST00000547068 BRPF3Q9ULD4 1205 aa14.29□□□□□ -0.12
NPAS3-205ENST00000547068 ITSN2Q9NZM3 1697 aa14.28□□□□□ -0.12
NPAS3-205ENST00000547068 MIA2Q96PC5 1412 aa14.28□□□□□ -0.12
NPAS3-205ENST00000547068 KIF7Q2M1P5 1343 aa14.28□□□□□ -0.12
NPAS3-205ENST00000547068 L3MBTL2Q969R5 705 aa14.28□□□□□ -0.12
NPAS3-205ENST00000547068 TTC37Q6PGP7 1564 aa14.27□□□□□ -0.13
NPAS3-205ENST00000547068 ZNF777Q9ULD5 760 aaPredicted RBP14.27□□□□□ -0.13
NPAS3-205ENST00000547068 ABCA9Q8IUA7 1624 aa14.27□□□□□ -0.13
NPAS3-205ENST00000547068 EIF5BO60841 1220 aaKnown RBP14.26□□□□□ -0.13
NPAS3-205ENST00000547068 MYO5CQ9NQX4 1742 aa14.26□□□□□ -0.13
NPAS3-205ENST00000547068 GSE1Q14687 1217 aa14.26□□□□□ -0.13
NPAS3-205ENST00000547068 CDC42BPAQ5VT25 1732 aa14.26□□□□□ -0.13
NPAS3-205ENST00000547068 PLCH2O75038 1416 aa14.25□□□□□ -0.13
NPAS3-205ENST00000547068 EFCAB2Q5VUJ9 269 aa14.25□□□□□ -0.13
NPAS3-205ENST00000547068 CD109Q6YHK3 1445 aa14.25□□□□□ -0.13
NPAS3-205ENST00000547068 BACH2Q9BYV9 841 aa14.25□□□□□ -0.13
NPAS3-205ENST00000547068 CNGB1Q14028 1251 aaPredicted RBP14.24□□□□□ -0.13
NPAS3-205ENST00000547068 GLI2P10070 1586 aa14.24□□□□□ -0.13
NPAS3-205ENST00000547068 ARHGAP5Q13017 1502 aa14.24□□□□□ -0.13
NPAS3-205ENST00000547068 SENP3-EIF4A1A0A087X0R7 540 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms