RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.49■□□□□ 0.872e-7■■■■■ 33.4
BRF1-207ENST00000546417 HECW1Q76N89 1606 aa20.47■□□□□ 0.87
BRF1-207ENST00000546417 ARHGEF12Q9NZN5 1544 aa20.44■□□□□ 0.86
BRF1-207ENST00000546417 STRCQ7RTU9 1775 aa20.44■□□□□ 0.86
BRF1-207ENST00000546417 ATP10AO60312 1499 aa20.43■□□□□ 0.86
BRF1-207ENST00000546417 SPATA31D1Q6ZQQ2 1576 aa20.42■□□□□ 0.86
BRF1-207ENST00000546417 SCAPERQ9BY12 1400 aa20.42■□□□□ 0.86
BRF1-207ENST00000546417 SETD1BQ9UPS6 1966 aaKnown RBP20.41■□□□□ 0.86
BRF1-207ENST00000546417 CEBPAP49715 358 aaPredicted RBP20.4■□□□□ 0.86
BRF1-207ENST00000546417 C9orf84Q5VXU9 1444 aa20.4■□□□□ 0.86
BRF1-207ENST00000546417 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.85
BRF1-207ENST00000546417 RANGAP1P46060 587 aaPredicted RBP20.39■□□□□ 0.85
BRF1-207ENST00000546417 CSRNP3Q8WYN3 585 aa20.39■□□□□ 0.85
BRF1-207ENST00000546417 PLCH2O75038 1416 aa20.37■□□□□ 0.85
BRF1-207ENST00000546417 PTPRTO14522 1441 aa20.35■□□□□ 0.85
BRF1-207ENST00000546417 EFCAB2Q5VUJ9 269 aa20.32■□□□□ 0.84
BRF1-207ENST00000546417 IQSEC2Q5JU85 1478 aa20.29■□□□□ 0.84
BRF1-207ENST00000546417 CDK13Q14004 1512 aaKnown RBP20.28■□□□□ 0.84
BRF1-207ENST00000546417 MYO5CQ9NQX4 1742 aa20.28■□□□□ 0.84
BRF1-207ENST00000546417 ZNF518AQ6AHZ1 1483 aa20.28■□□□□ 0.84
BRF1-207ENST00000546417 LTBP4Q8N2S1 1624 aa20.26■□□□□ 0.83
BRF1-207ENST00000546417 MYT1LQ9UL68 1186 aa20.25■□□□□ 0.83
BRF1-207ENST00000546417 C3P01024 1663 aa20.25■□□□□ 0.83
BRF1-207ENST00000546417 ESF1Q9H501 851 aaKnown RBP20.24■□□□□ 0.83
BRF1-207ENST00000546417 KDM5CP41229 1560 aa20.22■□□□□ 0.83
BRF1-207ENST00000546417 AFAP1Q8N556 730 aa20.22■□□□□ 0.83
BRF1-207ENST00000546417 CDK11AQ9UQ88 783 aaPredicted RBP20.22■□□□□ 0.83
BRF1-207ENST00000546417 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
BRF1-207ENST00000546417 TRAPPC8Q9Y2L5 1435 aa20.21■□□□□ 0.83
BRF1-207ENST00000546417 EEA1Q15075 1411 aa20.2■□□□□ 0.82
BRF1-207ENST00000546417 DIP2CQ9Y2E4 1556 aa20.2■□□□□ 0.82
BRF1-207ENST00000546417 NCOA1Q15788 1441 aa20.19■□□□□ 0.82
BRF1-207ENST00000546417 ARHGAP5Q13017 1502 aa20.18■□□□□ 0.82
BRF1-207ENST00000546417 ATP1B4Q9UN42 357 aaPredicted RBP20.17■□□□□ 0.82
BRF1-207ENST00000546417 KIF14Q15058 1648 aa20.16■□□□□ 0.82
BRF1-207ENST00000546417 AGLP35573 1532 aa20.16■□□□□ 0.82
BRF1-207ENST00000546417 MLH3Q9UHC1 1453 aa20.15■□□□□ 0.82
BRF1-207ENST00000546417 ABCA6Q8N139 1617 aa20.14■□□□□ 0.81
BRF1-207ENST00000546417 FMN1Q68DA7 1419 aa20.13■□□□□ 0.81
BRF1-207ENST00000546417 CNTLNQ9NXG0 1405 aa20.13■□□□□ 0.81
BRF1-207ENST00000546417 UBAP1LF5GYI3 381 aa20.11■□□□□ 0.81
BRF1-207ENST00000546417 CAMSAP1Q5T5Y3 1602 aa20.11■□□□□ 0.81
BRF1-207ENST00000546417 CLIP1P30622 1438 aa20.1■□□□□ 0.81
BRF1-207ENST00000546417 TROQ12816 1431 aaPredicted RBP20.1■□□□□ 0.81
BRF1-207ENST00000546417 NPATQ14207 1427 aa20.09■□□□□ 0.81
BRF1-207ENST00000546417 CDC42BPBQ9Y5S2 1711 aa20.07■□□□□ 0.8
BRF1-207ENST00000546417 ZNF335Q9H4Z2 1342 aaPredicted RBP20.06■□□□□ 0.8
BRF1-207ENST00000546417 MROH2AA6NES4 1674 aa20.06■□□□□ 0.8
BRF1-207ENST00000546417 NCKAP5LQ9HCH0 1330 aa20.04■□□□□ 0.8
BRF1-207ENST00000546417 KIDINS220Q9ULH0 1771 aa20.03■□□□□ 0.8
BRF1-207ENST00000546417 ABCC1P33527 1531 aa20.03■□□□□ 0.8
BRF1-207ENST00000546417 PKD2Q13563 968 aa20.03■□□□□ 0.8
BRF1-207ENST00000546417 ZMYM3Q14202 1370 aa20.02■□□□□ 0.8
BRF1-207ENST00000546417 ITSN2Q9NZM3 1697 aa20.02■□□□□ 0.8
BRF1-207ENST00000546417 PREX2Q70Z35 1606 aa20.01■□□□□ 0.79
BRF1-207ENST00000546417 PLA2R1Q13018 1463 aa20■□□□□ 0.79
BRF1-207ENST00000546417 SUPT6HQ7KZ85 1726 aaKnown RBP19.99■□□□□ 0.79
BRF1-207ENST00000546417 ARHGAP35Q9NRY4 1499 aa19.98■□□□□ 0.79
BRF1-207ENST00000546417 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
BRF1-207ENST00000546417 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
BRF1-207ENST00000546417 LRRIQ1Q96JM4 1722 aa19.96■□□□□ 0.79
BRF1-207ENST00000546417 MYO3AQ8NEV4 1616 aa19.95■□□□□ 0.78
BRF1-207ENST00000546417 TCOF1Q13428 1488 aaKnown RBP19.95■□□□□ 0.78
BRF1-207ENST00000546417 MED1Q15648 1581 aaPredicted RBP19.94■□□□□ 0.78
BRF1-207ENST00000546417 CEP170BQ9Y4F5 1589 aaPredicted RBP19.93■□□□□ 0.78
BRF1-207ENST00000546417 PPP6R1Q9UPN7 881 aa19.93■□□□□ 0.78
BRF1-207ENST00000546417 SAMD9LQ8IVG5 1584 aa19.92■□□□□ 0.78
BRF1-207ENST00000546417 CLTCQ00610 1675 aaKnown RBP19.92■□□□□ 0.78
BRF1-207ENST00000546417 HSPA1LP34931 641 aa19.92■□□□□ 0.78
BRF1-207ENST00000546417 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
BRF1-207ENST00000546417 TOM1O60784 492 aa19.91■□□□□ 0.78
BRF1-207ENST00000546417 CDC42BPAQ5VT25 1732 aa19.9■□□□□ 0.78
BRF1-207ENST00000546417 SPAG9O60271 1321 aaKnown RBP19.9■□□□□ 0.78
BRF1-207ENST00000546417 PTPRKQ15262 1439 aa19.9■□□□□ 0.78
BRF1-207ENST00000546417 PIP4K2BP78356 416 aa19.89■□□□□ 0.77
BRF1-207ENST00000546417 EHMT2Q96KQ7 1210 aa19.89■□□□□ 0.77
BRF1-207ENST00000546417 CCDC18Q5T9S5 1454 aa19.88■□□□□ 0.77
BRF1-207ENST00000546417 ZNF777Q9ULD5 760 aaPredicted RBP19.87■□□□□ 0.77
BRF1-207ENST00000546417 GGT6Q6P531 493 aa19.85■□□□□ 0.77
BRF1-207ENST00000546417 CPS1P31327 1500 aa19.85■□□□□ 0.77
BRF1-207ENST00000546417 SYCP2Q9BX26 1530 aa19.85■□□□□ 0.77
BRF1-207ENST00000546417 PLXNC1O60486 1568 aa19.84■□□□□ 0.77
BRF1-207ENST00000546417 PHF23Q9BUL5 403 aaPredicted RBP19.84■□□□□ 0.77
BRF1-207ENST00000546417 ATP7AQ04656 1500 aa19.84■□□□□ 0.77
BRF1-207ENST00000546417 A2MP01023 1474 aa19.84■□□□□ 0.77
BRF1-207ENST00000546417 HNRNPMP52272 730 aaKnown RBP eCLIP19.83■□□□□ 0.773e-6■■■■■ 26.8
BRF1-207ENST00000546417 A2ML1A8K2U0 1454 aa19.83■□□□□ 0.76
BRF1-207ENST00000546417 CASKIN1Q8WXD9 1431 aa19.82■□□□□ 0.76
BRF1-207ENST00000546417 DNMT1P26358 1616 aaKnown RBP19.81■□□□□ 0.76
BRF1-207ENST00000546417 POLR1AO95602 1720 aaPredicted RBP19.8■□□□□ 0.76
BRF1-207ENST00000546417 SHANK2Q9UPX8 1470 aa19.79■□□□□ 0.76
BRF1-207ENST00000546417 INO80Q9ULG1 1556 aaPredicted RBP19.79■□□□□ 0.76
BRF1-207ENST00000546417 KIAA1107Q9UPP5 1409 aa19.79■□□□□ 0.76
BRF1-207ENST00000546417 PLEKHH2Q8IVE3 1493 aa19.79■□□□□ 0.76
BRF1-207ENST00000546417 GPATCH8Q9UKJ3 1502 aaKnown RBP19.77■□□□□ 0.76
BRF1-207ENST00000546417 ADGBQ8N7X0 1667 aa19.75■□□□□ 0.75
BRF1-207ENST00000546417 NEURL4Q96JN8 1562 aa19.74■□□□□ 0.75
BRF1-207ENST00000546417 CFDP1Q9UEE9 299 aaPredicted RBP19.74■□□□□ 0.75
BRF1-207ENST00000546417 ANKLE2Q86XL3 938 aa19.73■□□□□ 0.75
BRF1-207ENST00000546417 TNRQ92752 1358 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms