RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 POLR1AO95602 1720 aaPredicted RBP19.31■□□□□ 0.68
SRP54-202ENST00000546080 SMG6Q86US8 1419 aaKnown RBP19.3■□□□□ 0.68
SRP54-202ENST00000546080 NBR1Q14596 966 aa19.3■□□□□ 0.68
SRP54-202ENST00000546080 KIF7Q2M1P5 1343 aa19.29■□□□□ 0.68
SRP54-202ENST00000546080 FOXD1Q16676 465 aa19.28■□□□□ 0.68
SRP54-202ENST00000546080 PAK3O75914 559 aaPredicted RBP19.27■□□□□ 0.68
SRP54-202ENST00000546080 RPRD2Q5VT52 1461 aaKnown RBP19.27■□□□□ 0.68
SRP54-202ENST00000546080 NBPF8Q3BBV2 869 aa19.27■□□□□ 0.68
SRP54-202ENST00000546080 NESP48681 1621 aa19.27■□□□□ 0.67
SRP54-202ENST00000546080 ANP32AP39687 249 aaKnown RBP19.26■□□□□ 0.67
SRP54-202ENST00000546080 TEX14Q8IWB6 1497 aa19.26■□□□□ 0.67
SRP54-202ENST00000546080 NUDCQ9Y266 331 aa19.25■□□□□ 0.67
SRP54-202ENST00000546080 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
SRP54-202ENST00000546080 CCDC136Q96JN2 1154 aa19.25■□□□□ 0.67
SRP54-202ENST00000546080 MIA2Q96PC5 1412 aa19.24■□□□□ 0.67
SRP54-202ENST00000546080 ANKRD30BQ9BXX2 1392 aa19.24■□□□□ 0.67
SRP54-202ENST00000546080 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
SRP54-202ENST00000546080 IPO9Q96P70 1041 aaKnown RBP19.21■□□□□ 0.67
SRP54-202ENST00000546080 RNF123Q5XPI4 1314 aa19.21■□□□□ 0.67
SRP54-202ENST00000546080 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
SRP54-202ENST00000546080 TDRD9Q8NDG6 1382 aaKnown RBP19.2■□□□□ 0.66
SRP54-202ENST00000546080 EPRSP07814 1512 aaKnown RBP19.18■□□□□ 0.66
SRP54-202ENST00000546080 RTL5Q5HYW3 569 aaPredicted RBP19.17■□□□□ 0.66
SRP54-202ENST00000546080 ZBTB47Q9UFB7 747 aaPredicted RBP19.17■□□□□ 0.66
SRP54-202ENST00000546080 DHX29Q7Z478 1369 aaKnown RBP19.17■□□□□ 0.66
SRP54-202ENST00000546080 ROCK1Q13464 1354 aa19.16■□□□□ 0.66
SRP54-202ENST00000546080 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
SRP54-202ENST00000546080 DAPK1P53355 1430 aa19.14■□□□□ 0.66
SRP54-202ENST00000546080 CDK13Q14004 1512 aaKnown RBP19.14■□□□□ 0.66
SRP54-202ENST00000546080 CNGB1Q14028 1251 aaPredicted RBP19.14■□□□□ 0.65
SRP54-202ENST00000546080 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
SRP54-202ENST00000546080 POLR3GLQ9BT43 218 aa19.11■□□□□ 0.65
SRP54-202ENST00000546080 DNMT1P26358 1616 aaKnown RBP19.11■□□□□ 0.65
SRP54-202ENST00000546080 PDS5BQ9NTI5 1447 aa19.1■□□□□ 0.65
SRP54-202ENST00000546080 USP47Q96K76 1375 aa19.08■□□□□ 0.65
SRP54-202ENST00000546080 WDR62O43379 1518 aa19.08■□□□□ 0.65
SRP54-202ENST00000546080 BCORL1Q5H9F3 1711 aa19.08■□□□□ 0.65
SRP54-202ENST00000546080 ABCC5O15440 1437 aa19.08■□□□□ 0.64
SRP54-202ENST00000546080 MBD5Q9P267 1494 aa19.06■□□□□ 0.64
SRP54-202ENST00000546080 ARID4BQ4LE39 1312 aaPredicted RBP19.06■□□□□ 0.64
SRP54-202ENST00000546080 IQGAP2Q13576 1575 aa19.06■□□□□ 0.64
SRP54-202ENST00000546080 ARID3CA6NKF2 412 aa19.05■□□□□ 0.64
SRP54-202ENST00000546080 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
SRP54-202ENST00000546080 PNISRQ8TF01 805 aaKnown RBP19.05■□□□□ 0.64
SRP54-202ENST00000546080 KIF14Q15058 1648 aa19.05■□□□□ 0.64
SRP54-202ENST00000546080 SENP3-EIF4A1A0A087X0R7 540 aa19.03■□□□□ 0.64
SRP54-202ENST00000546080 KDM5CP41229 1560 aa19.03■□□□□ 0.64
SRP54-202ENST00000546080 PZPP20742 1482 aa19.03■□□□□ 0.64
SRP54-202ENST00000546080 ROCK2O75116 1388 aaKnown RBP19.03■□□□□ 0.64
SRP54-202ENST00000546080 ZNF326Q5BKZ1 582 aaKnown RBP19.02■□□□□ 0.64
SRP54-202ENST00000546080 TCERG1O14776 1098 aaKnown RBP18.99■□□□□ 0.63
SRP54-202ENST00000546080 RRP1P56182 461 aaKnown RBP18.99■□□□□ 0.63
SRP54-202ENST00000546080 NPM2Q86SE8 214 aaKnown RBP18.99■□□□□ 0.63
SRP54-202ENST00000546080 ZNF644Q9H582 1327 aaPredicted RBP18.99■□□□□ 0.63
SRP54-202ENST00000546080 ERCC6Q03468 1493 aa18.98■□□□□ 0.63
SRP54-202ENST00000546080 KIAA1107Q9UPP5 1409 aa18.98■□□□□ 0.63
SRP54-202ENST00000546080 KIF15Q9NS87 1388 aa18.98■□□□□ 0.63
SRP54-202ENST00000546080 LRPPRCP42704 1394 aaKnown RBP18.98■□□□□ 0.63
SRP54-202ENST00000546080 PBRM1Q86U86 1689 aa18.96■□□□□ 0.62
SRP54-202ENST00000546080 BRD4O60885 1362 aaPredicted RBP18.95■□□□□ 0.62
SRP54-202ENST00000546080 EXOC6Q8TAG9 804 aa18.95■□□□□ 0.62
SRP54-202ENST00000546080 MYBBP1AQ9BQG0 1328 aaKnown RBP18.94■□□□□ 0.62
SRP54-202ENST00000546080 TARBP1Q13395 1621 aaKnown RBP18.94■□□□□ 0.62
SRP54-202ENST00000546080 ADGBQ8N7X0 1667 aa18.93■□□□□ 0.62
SRP54-202ENST00000546080 RALGAPBQ86X10 1494 aa18.93■□□□□ 0.62
SRP54-202ENST00000546080 KTN1Q86UP2 1357 aaKnown RBP18.93■□□□□ 0.62
SRP54-202ENST00000546080 PDE4AP27815 886 aa18.92■□□□□ 0.62
SRP54-202ENST00000546080 RCAN3Q9UKA8 241 aa18.92■□□□□ 0.62
SRP54-202ENST00000546080 RALBP1Q15311 655 aa18.91■□□□□ 0.62
SRP54-202ENST00000546080 USP35Q9P2H5 1018 aa18.91■□□□□ 0.62
SRP54-202ENST00000546080 ADAMTS12P58397 1594 aa18.91■□□□□ 0.62
SRP54-202ENST00000546080 UHRF1BP1Q6BDS2 1440 aa18.91■□□□□ 0.62
SRP54-202ENST00000546080 NEFMP07197 916 aa18.91■□□□□ 0.62
SRP54-202ENST00000546080 PKD2Q13563 968 aa18.91■□□□□ 0.62
SRP54-202ENST00000546080 CAMSAP2Q08AD1 1489 aa18.9■□□□□ 0.62
SRP54-202ENST00000546080 MS4A1P11836 297 aa18.9■□□□□ 0.62
SRP54-202ENST00000546080 CARD11Q9BXL7 1154 aa18.9■□□□□ 0.62
SRP54-202ENST00000546080 LAS1LQ9Y4W2 734 aaKnown RBP18.9■□□□□ 0.62
SRP54-202ENST00000546080 BACH2Q9BYV9 841 aa18.89■□□□□ 0.61
SRP54-202ENST00000546080 NUP153P49790 1475 aaKnown RBP18.87■□□□□ 0.61
SRP54-202ENST00000546080 PRKCSHP14314 528 aaPredicted RBP18.87■□□□□ 0.61
SRP54-202ENST00000546080 IL27Q8NEV9 243 aa18.87■□□□□ 0.61
SRP54-202ENST00000546080 ADGRL2O95490 1459 aa18.87■□□□□ 0.61
SRP54-202ENST00000546080 PPM1GO15355 546 aaPredicted RBP18.86■□□□□ 0.61
SRP54-202ENST00000546080 ITSN2Q9NZM3 1697 aa18.86■□□□□ 0.61
SRP54-202ENST00000546080 E9PCH4 1651 aa18.85■□□□□ 0.61
SRP54-202ENST00000546080 PDE3BQ13370 1112 aa18.85■□□□□ 0.61
SRP54-202ENST00000546080 ANO8Q9HCE9 1232 aaPredicted RBP18.85■□□□□ 0.61
SRP54-202ENST00000546080 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
SRP54-202ENST00000546080 RAPGEF6Q8TEU7 1601 aa18.85■□□□□ 0.61
SRP54-202ENST00000546080 ARHGEF12Q9NZN5 1544 aa18.84■□□□□ 0.61
SRP54-202ENST00000546080 KIAA0556O60303 1618 aa18.84■□□□□ 0.61
SRP54-202ENST00000546080 CROCC2H7BZ55 1655 aa18.84■□□□□ 0.61
SRP54-202ENST00000546080 CFDP1Q9UEE9 299 aaPredicted RBP18.84■□□□□ 0.61
SRP54-202ENST00000546080 SALL2Q9Y467 1007 aaPredicted RBP18.84■□□□□ 0.61
SRP54-202ENST00000546080 ST20-MTHFSA0A0A6YYL1 179 aa18.83■□□□□ 0.6
SRP54-202ENST00000546080 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
SRP54-202ENST00000546080 NLRP13Q86W25 1043 aa18.81■□□□□ 0.6
SRP54-202ENST00000546080 TROQ12816 1431 aaPredicted RBP18.81■□□□□ 0.6
SRP54-202ENST00000546080 DISP1Q96F81 1524 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms