RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ZFYVE16Q7Z3T8 1539 aa34.45■■■■□ 3.1
SCARB1-210ENST00000545493 HECW2Q9P2P5 1572 aa34.44■■■■□ 3.1
SCARB1-210ENST00000545493 SIGLEC1Q9BZZ2 1709 aa34.44■■■■□ 3.1
SCARB1-210ENST00000545493 SCAPERQ9BY12 1400 aa34.42■■■■□ 3.1
SCARB1-210ENST00000545493 YEATS2Q9ULM3 1422 aa34.41■■■■□ 3.1
SCARB1-210ENST00000545493 MADDQ8WXG6 1647 aa34.41■■■■□ 3.1
SCARB1-210ENST00000545493 ARHGAP5Q13017 1502 aa34.4■■■■□ 3.1
SCARB1-210ENST00000545493 CDC42BPBQ9Y5S2 1711 aa34.4■■■■□ 3.1
SCARB1-210ENST00000545493 PREX2Q70Z35 1606 aa34.4■■■■□ 3.1
SCARB1-210ENST00000545493 MAGI2Q86UL8 1455 aa34.38■■■■□ 3.09
SCARB1-210ENST00000545493 PTPRMP28827 1452 aa34.33■■■■□ 3.09
SCARB1-210ENST00000545493 EFCAB2Q5VUJ9 269 aa34.33■■■■□ 3.09
SCARB1-210ENST00000545493 KDM5CP41229 1560 aa34.32■■■■□ 3.08
SCARB1-210ENST00000545493 CDC42BPAQ5VT25 1732 aa34.3■■■■□ 3.08
SCARB1-210ENST00000545493 ABCC1P33527 1531 aa34.28■■■■□ 3.08
SCARB1-210ENST00000545493 ARID4BQ4LE39 1312 aaPredicted RBP34.28■■■■□ 3.08
SCARB1-210ENST00000545493 ZNF518AQ6AHZ1 1483 aa34.27■■■■□ 3.08
SCARB1-210ENST00000545493 RIMS1Q86UR5 1692 aaKnown RBP34.26■■■■□ 3.08
SCARB1-210ENST00000545493 ITSN2Q9NZM3 1697 aa34.25■■■■□ 3.07
SCARB1-210ENST00000545493 CEP162Q5TB80 1403 aa34.24■■■■□ 3.07
SCARB1-210ENST00000545493 ARHGEF12Q9NZN5 1544 aa34.2■■■■□ 3.06
SCARB1-210ENST00000545493 C9orf84Q5VXU9 1444 aa34.19■■■■□ 3.06
SCARB1-210ENST00000545493 DIP2CQ9Y2E4 1556 aa34.17■■■■□ 3.06
SCARB1-210ENST00000545493 ATP10AO60312 1499 aa34.16■■■■□ 3.06
SCARB1-210ENST00000545493 ABCA6Q8N139 1617 aa34.15■■■■□ 3.06
SCARB1-210ENST00000545493 FER1L4A9Z1Z3 1794 aa34.15■■■■□ 3.06
SCARB1-210ENST00000545493 SAMD9LQ8IVG5 1584 aa34.14■■■■□ 3.06
SCARB1-210ENST00000545493 TRAPPC8Q9Y2L5 1435 aa34.13■■■■□ 3.05
SCARB1-210ENST00000545493 GPATCH8Q9UKJ3 1502 aaKnown RBP34.11■■■■□ 3.05
SCARB1-210ENST00000545493 AFAP1Q8N556 730 aa34.11■■■■□ 3.05
SCARB1-210ENST00000545493 REREQ9P2R6 1566 aa34.1■■■■□ 3.05
SCARB1-210ENST00000545493 MLH3Q9UHC1 1453 aa34.09■■■■□ 3.05
SCARB1-210ENST00000545493 EHBP1L1Q8N3D4 1523 aa34.08■■■■□ 3.05
SCARB1-210ENST00000545493 SYCP2Q9BX26 1530 aa34.06■■■■□ 3.04
SCARB1-210ENST00000545493 KIDINS220Q9ULH0 1771 aa34.04■■■■□ 3.04
SCARB1-210ENST00000545493 MTUS2Q5JR59 1369 aa34.03■■■■□ 3.04
SCARB1-210ENST00000545493 TIAM1Q13009 1591 aa34.02■■■■□ 3.04
SCARB1-210ENST00000545493 LMTK3Q96Q04 1460 aa34.01■■■■□ 3.04
SCARB1-210ENST00000545493 MLECQ14165 292 aa34.01■■■■□ 3.03
SCARB1-210ENST00000545493 CCNB3Q8WWL7 1395 aa33.95■■■■□ 3.02
SCARB1-210ENST00000545493 AGLP35573 1532 aa33.93■■■■□ 3.02
SCARB1-210ENST00000545493 ZNF777Q9ULD5 760 aaPredicted RBP33.92■■■■□ 3.02
SCARB1-210ENST00000545493 INO80Q9ULG1 1556 aaPredicted RBP33.91■■■■□ 3.02
SCARB1-210ENST00000545493 MYT1LQ9UL68 1186 aa33.91■■■■□ 3.02
SCARB1-210ENST00000545493 PLEKHH2Q8IVE3 1493 aa33.9■■■■□ 3.02
SCARB1-210ENST00000545493 KIAA1107Q9UPP5 1409 aa33.9■■■■□ 3.02
SCARB1-210ENST00000545493 LOC105371045A0A1W2PR82 267 aa33.88■■■■□ 3.01
SCARB1-210ENST00000545493 VPS8Q8N3P4 1428 aa33.87■■■■□ 3.01
SCARB1-210ENST00000545493 ATP7AQ04656 1500 aa33.86■■■■□ 3.01
SCARB1-210ENST00000545493 PLPPR3Q6T4P5 718 aa33.86■■■■□ 3.01
SCARB1-210ENST00000545493 CFDP1Q9UEE9 299 aaPredicted RBP33.86■■■■□ 3.01
SCARB1-210ENST00000545493 SUPT6HQ7KZ85 1726 aaKnown RBP33.85■■■■□ 3.01
SCARB1-210ENST00000545493 HNRNPMP52272 730 aaKnown RBP eCLIP33.82■■■■□ 33e-9■■■■■ 27.7
SCARB1-210ENST00000545493 NCOA2Q15596 1464 aa33.82■■■■□ 3
SCARB1-210ENST00000545493 PLXNC1O60486 1568 aa33.81■■■■□ 3
SCARB1-210ENST00000545493 PREX1Q8TCU6 1659 aa33.8■■■■□ 3
SCARB1-210ENST00000545493 SPAG9O60271 1321 aaKnown RBP33.78■■■■□ 3
SCARB1-210ENST00000545493 C3P01024 1663 aa33.77■■■■□ 3
SCARB1-210ENST00000545493 MBD5Q9P267 1494 aa33.76■■■■□ 3
SCARB1-210ENST00000545493 ZNF644Q9H582 1327 aaPredicted RBP33.74■■■□□ 2.99
SCARB1-210ENST00000545493 LRRC9Q6ZRR7 1453 aa33.71■■■□□ 2.99
SCARB1-210ENST00000545493 CAMSAP2Q08AD1 1489 aa33.7■■■□□ 2.99
SCARB1-210ENST00000545493 CEBPAP49715 358 aaPredicted RBP33.7■■■□□ 2.99
SCARB1-210ENST00000545493 ADGBQ8N7X0 1667 aa33.7■■■□□ 2.99
SCARB1-210ENST00000545493 HSPA2P54652 639 aa33.69■■■□□ 2.98
SCARB1-210ENST00000545493 A2MP01023 1474 aa33.68■■■□□ 2.98
SCARB1-210ENST00000545493 MROH2AA6NES4 1674 aa33.65■■■□□ 2.98
SCARB1-210ENST00000545493 MAP3K1Q13233 1512 aa33.65■■■□□ 2.98
SCARB1-210ENST00000545493 ILDR1Q86SU0 546 aaPredicted RBP33.64■■■□□ 2.98
SCARB1-210ENST00000545493 CNTLNQ9NXG0 1405 aa33.63■■■□□ 2.97
SCARB1-210ENST00000545493 CCDC141Q6ZP82 1450 aa33.63■■■□□ 2.97
SCARB1-210ENST00000545493 RTEL1-TNFRSF6BF6WH68 1400 aa33.59■■■□□ 2.97
SCARB1-210ENST00000545493 UHRF1BP1Q6BDS2 1440 aa33.59■■■□□ 2.97
SCARB1-210ENST00000545493 ARHGEF5Q12774 1597 aa33.58■■■□□ 2.97
SCARB1-210ENST00000545493 CLTCQ00610 1675 aaKnown RBP33.58■■■□□ 2.97
SCARB1-210ENST00000545493 SETD1BQ9UPS6 1966 aaKnown RBP33.54■■■□□ 2.96
SCARB1-210ENST00000545493 ESF1Q9H501 851 aaKnown RBP33.53■■■□□ 2.96
SCARB1-210ENST00000545493 KANK4Q5T7N3 995 aaPredicted RBP33.52■■■□□ 2.96
SCARB1-210ENST00000545493 STRCQ7RTU9 1775 aa33.49■■■□□ 2.95
SCARB1-210ENST00000545493 NPATQ14207 1427 aa33.45■■■□□ 2.95
SCARB1-210ENST00000545493 DHX29Q7Z478 1369 aaKnown RBP33.45■■■□□ 2.94
SCARB1-210ENST00000545493 MYOM3Q5VTT5 1437 aa33.45■■■□□ 2.94
SCARB1-210ENST00000545493 ZMYM3Q14202 1370 aa33.44■■■□□ 2.94
SCARB1-210ENST00000545493 MAST1Q9Y2H9 1570 aa33.43■■■□□ 2.94
SCARB1-210ENST00000545493 MYO3AQ8NEV4 1616 aa33.41■■■□□ 2.94
SCARB1-210ENST00000545493 MIA2Q96PC5 1412 aa33.4■■■□□ 2.94
SCARB1-210ENST00000545493 RSPH4AQ5TD94 716 aa33.39■■■□□ 2.94
SCARB1-210ENST00000545493 GGT6Q6P531 493 aa33.39■■■□□ 2.94
SCARB1-210ENST00000545493 ZNF142P52746 1687 aaPredicted RBP33.38■■■□□ 2.93
SCARB1-210ENST00000545493 PTPRKQ15262 1439 aa33.36■■■□□ 2.93
SCARB1-210ENST00000545493 FAM135AQ9P2D6 1515 aa33.34■■■□□ 2.93
SCARB1-210ENST00000545493 KDM5DQ9BY66 1539 aa33.33■■■□□ 2.93
SCARB1-210ENST00000545493 CROCC2H7BZ55 1655 aa33.31■■■□□ 2.92
SCARB1-210ENST00000545493 NCOA1Q15788 1441 aa33.3■■■□□ 2.92
SCARB1-210ENST00000545493 PPP6R1Q9UPN7 881 aa33.3■■■□□ 2.92
SCARB1-210ENST00000545493 CEP170BQ9Y4F5 1589 aaPredicted RBP33.3■■■□□ 2.92
SCARB1-210ENST00000545493 RNF17Q9BXT8 1623 aaKnown RBP33.29■■■□□ 2.92
SCARB1-210ENST00000545493 PTPN23Q9H3S7 1636 aa33.29■■■□□ 2.92
SCARB1-210ENST00000545493 FBXO41Q8TF61 875 aa33.28■■■□□ 2.92
SCARB1-210ENST00000545493 CAMSAP1Q5T5Y3 1602 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms