RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 ANP32EQ9BTT0 268 aa23.46■■□□□ 1.35
SEC23A-203ENST00000545328 SLC4A1APQ9BWU0 796 aaKnown RBP23.46■■□□□ 1.35
SEC23A-203ENST00000545328 ZNF326Q5BKZ1 582 aaKnown RBP23.44■■□□□ 1.34
SEC23A-203ENST00000545328 ZNF777Q9ULD5 760 aaPredicted RBP23.44■■□□□ 1.34
SEC23A-203ENST00000545328 WDR62O43379 1518 aa23.43■■□□□ 1.34
SEC23A-203ENST00000545328 ZNF608Q9ULD9 1512 aaPredicted RBP23.42■■□□□ 1.34
SEC23A-203ENST00000545328 ADAMTS12P58397 1594 aa23.42■■□□□ 1.34
SEC23A-203ENST00000545328 SENP3-EIF4A1A0A087X0R7 540 aa23.4■■□□□ 1.34
SEC23A-203ENST00000545328 MRS2Q9HD23 443 aa23.4■■□□□ 1.34
SEC23A-203ENST00000545328 MIA2Q96PC5 1412 aa23.39■■□□□ 1.33
SEC23A-203ENST00000545328 DAPK1P53355 1430 aa23.39■■□□□ 1.33
SEC23A-203ENST00000545328 CNTLNQ9NXG0 1405 aa23.38■■□□□ 1.33
SEC23A-203ENST00000545328 FBLN2P98095 1184 aa23.37■■□□□ 1.33
SEC23A-203ENST00000545328 CCDC7Q96M83 1385 aa23.36■■□□□ 1.33
SEC23A-203ENST00000545328 PRKRIP1Q9H875 184 aaPredicted RBP23.36■■□□□ 1.33
SEC23A-203ENST00000545328 ABCC5O15440 1437 aa23.35■■□□□ 1.33
SEC23A-203ENST00000545328 AKNAQ7Z591 1439 aa23.34■■□□□ 1.33
SEC23A-203ENST00000545328 ANKRD30BQ9BXX2 1392 aa23.34■■□□□ 1.33
SEC23A-203ENST00000545328 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
SEC23A-203ENST00000545328 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
SEC23A-203ENST00000545328 PRG4Q92954 1404 aaPredicted RBP23.3■■□□□ 1.32
SEC23A-203ENST00000545328 CFDP1Q9UEE9 299 aaPredicted RBP23.3■■□□□ 1.32
SEC23A-203ENST00000545328 NUP153P49790 1475 aaKnown RBP23.3■■□□□ 1.32
SEC23A-203ENST00000545328 NCOA1Q15788 1441 aa23.29■■□□□ 1.32
SEC23A-203ENST00000545328 RPRD2Q5VT52 1461 aaKnown RBP23.28■■□□□ 1.32
SEC23A-203ENST00000545328 CDK11AQ9UQ88 783 aaPredicted RBP23.28■■□□□ 1.32
SEC23A-203ENST00000545328 DISP1Q96F81 1524 aa23.28■■□□□ 1.32
SEC23A-203ENST00000545328 KIAA0556O60303 1618 aa23.26■■□□□ 1.31
SEC23A-203ENST00000545328 TEX14Q8IWB6 1497 aa23.25■■□□□ 1.31
SEC23A-203ENST00000545328 DNMT1P26358 1616 aaKnown RBP23.24■■□□□ 1.31
SEC23A-203ENST00000545328 ROCK1Q13464 1354 aa23.22■■□□□ 1.31
SEC23A-203ENST00000545328 B4GALNT3Q6L9W6 998 aa23.22■■□□□ 1.31
SEC23A-203ENST00000545328 KIAA0586Q9BVV6 1533 aa23.22■■□□□ 1.31
SEC23A-203ENST00000545328 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
SEC23A-203ENST00000545328 PLB1Q6P1J6 1458 aa23.21■■□□□ 1.31
SEC23A-203ENST00000545328 RAPGEF6Q8TEU7 1601 aa23.21■■□□□ 1.31
SEC23A-203ENST00000545328 PKD2Q13563 968 aa23.21■■□□□ 1.31
SEC23A-203ENST00000545328 MSH5O43196 834 aa23.18■■□□□ 1.3
SEC23A-203ENST00000545328 CAMSAP2Q08AD1 1489 aa23.18■■□□□ 1.3
SEC23A-203ENST00000545328 GRIN2AQ12879 1464 aa23.17■■□□□ 1.3
SEC23A-203ENST00000545328 PZPP20742 1482 aa23.16■■□□□ 1.3
SEC23A-203ENST00000545328 IFT140Q96RY7 1462 aa23.16■■□□□ 1.3
SEC23A-203ENST00000545328 KDM2AQ9Y2K7 1162 aa23.15■■□□□ 1.3
SEC23A-203ENST00000545328 SPATA31E1Q6ZUB1 1445 aa23.14■■□□□ 1.3
SEC23A-203ENST00000545328 KIF14Q15058 1648 aa23.14■■□□□ 1.29
SEC23A-203ENST00000545328 TROQ12816 1431 aaPredicted RBP23.13■■□□□ 1.29
SEC23A-203ENST00000545328 PPP4R2Q9NY27 417 aa23.13■■□□□ 1.29
SEC23A-203ENST00000545328 ZBED9Q6R2W3 1325 aa23.12■■□□□ 1.29
SEC23A-203ENST00000545328 USP47Q96K76 1375 aa23.12■■□□□ 1.29
SEC23A-203ENST00000545328 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
SEC23A-203ENST00000545328 GPATCH8Q9UKJ3 1502 aaKnown RBP23.1■■□□□ 1.29
SEC23A-203ENST00000545328 KIAA1107Q9UPP5 1409 aa23.06■■□□□ 1.28
SEC23A-203ENST00000545328 JPH4Q96JJ6 628 aa23.05■■□□□ 1.28
SEC23A-203ENST00000545328 NUP155O75694 1391 aa23.05■■□□□ 1.28
SEC23A-203ENST00000545328 BCORL1Q5H9F3 1711 aa23.05■■□□□ 1.28
SEC23A-203ENST00000545328 ANKRD30AQ9BXX3 1397 aa23.04■■□□□ 1.28
SEC23A-203ENST00000545328 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
SEC23A-203ENST00000545328 ERICH6Q7L0X2 663 aa23.03■■□□□ 1.28
SEC23A-203ENST00000545328 ANKRD50Q9ULJ7 1429 aa23.03■■□□□ 1.28
SEC23A-203ENST00000545328 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
SEC23A-203ENST00000545328 CEP170Q5SW79 1584 aa23.03■■□□□ 1.28
SEC23A-203ENST00000545328 PLEKHD1A6NEE1 506 aa23.02■■□□□ 1.28
SEC23A-203ENST00000545328 DHX29Q7Z478 1369 aaKnown RBP23.02■■□□□ 1.28
SEC23A-203ENST00000545328 HNRNPMP52272 730 aaKnown RBP eCLIP23.02■■□□□ 1.272e-7■■■□□ 16
SEC23A-203ENST00000545328 ITSN2Q9NZM3 1697 aa23■■□□□ 1.27
SEC23A-203ENST00000545328 DCAF11Q8TEB1 546 aa22.99■■□□□ 1.27
SEC23A-203ENST00000545328 ADGBQ8N7X0 1667 aa22.99■■□□□ 1.27
SEC23A-203ENST00000545328 SALL2Q9Y467 1007 aaPredicted RBP22.98■■□□□ 1.27
SEC23A-203ENST00000545328 POLR1AO95602 1720 aaPredicted RBP22.98■■□□□ 1.27
SEC23A-203ENST00000545328 TMC1Q8TDI8 760 aa22.98■■□□□ 1.27
SEC23A-203ENST00000545328 ST20-MTHFSA0A0A6YYL1 179 aa22.97■■□□□ 1.27
SEC23A-203ENST00000545328 MBD5Q9P267 1494 aa22.96■■□□□ 1.27
SEC23A-203ENST00000545328 TSPY4P0CV99 314 aa22.96■■□□□ 1.27
SEC23A-203ENST00000545328 TSPY10P0CW01 314 aa22.96■■□□□ 1.27
SEC23A-203ENST00000545328 CARMIL2Q6F5E8 1435 aa22.95■■□□□ 1.26
SEC23A-203ENST00000545328 ERICH6BQ5W0A0 696 aa22.95■■□□□ 1.26
SEC23A-203ENST00000545328 C9orf84Q5VXU9 1444 aa22.94■■□□□ 1.26
SEC23A-203ENST00000545328 FANCIQ9NVI1 1328 aa22.93■■□□□ 1.26
SEC23A-203ENST00000545328 RGL3Q3MIN7 710 aa22.93■■□□□ 1.26
SEC23A-203ENST00000545328 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
SEC23A-203ENST00000545328 CROCC2H7BZ55 1655 aa22.92■■□□□ 1.26
SEC23A-203ENST00000545328 KDM5CP41229 1560 aa22.91■■□□□ 1.26
SEC23A-203ENST00000545328 ADGRL2O95490 1459 aa22.91■■□□□ 1.26
SEC23A-203ENST00000545328 NUDCQ9Y266 331 aa22.91■■□□□ 1.26
SEC23A-203ENST00000545328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.26
SEC23A-203ENST00000545328 MAGI1Q96QZ7 1491 aaPredicted RBP22.89■■□□□ 1.26
SEC23A-203ENST00000545328 CDC42BPAQ5VT25 1732 aa22.88■■□□□ 1.25
SEC23A-203ENST00000545328 KIF15Q9NS87 1388 aa22.88■■□□□ 1.25
SEC23A-203ENST00000545328 PNISRQ8TF01 805 aaKnown RBP22.88■■□□□ 1.25
SEC23A-203ENST00000545328 CCDC136Q96JN2 1154 aa22.88■■□□□ 1.25
SEC23A-203ENST00000545328 ATP10BO94823 1461 aa22.86■■□□□ 1.25
SEC23A-203ENST00000545328 SMG6Q86US8 1419 aaKnown RBP22.86■■□□□ 1.25
SEC23A-203ENST00000545328 ADCY10Q96PN6 1610 aa22.85■■□□□ 1.25
SEC23A-203ENST00000545328 ROCK2O75116 1388 aaKnown RBP22.83■■□□□ 1.25
SEC23A-203ENST00000545328 RALGAPBQ86X10 1494 aa22.82■■□□□ 1.24
SEC23A-203ENST00000545328 ABCC10Q5T3U5 1492 aa22.8■■□□□ 1.24
SEC23A-203ENST00000545328 NBPF1Q3BBV0 1214 aa22.8■■□□□ 1.24
SEC23A-203ENST00000545328 NUP160Q12769 1436 aa22.78■■□□□ 1.24
SEC23A-203ENST00000545328 UHRF1BP1Q6BDS2 1440 aa22.77■■□□□ 1.24
SEC23A-203ENST00000545328 ARID4BQ4LE39 1312 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms