RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 PLCH2O75038 1416 aa24.51■■□□□ 1.51
COPS7A-220ENST00000544725 FER1L4A9Z1Z3 1794 aa24.49■■□□□ 1.51
COPS7A-220ENST00000544725 CDK13Q14004 1512 aaKnown RBP24.47■■□□□ 1.51
COPS7A-220ENST00000544725 ATP10AO60312 1499 aa24.47■■□□□ 1.51
COPS7A-220ENST00000544725 ARHGEF12Q9NZN5 1544 aa24.45■■□□□ 1.51
COPS7A-220ENST00000544725 C9orf84Q5VXU9 1444 aa24.45■■□□□ 1.51
COPS7A-220ENST00000544725 EFCAB2Q5VUJ9 269 aa24.45■■□□□ 1.5
COPS7A-220ENST00000544725 DMRT2Q9Y5R5 561 aa24.41■■□□□ 1.5
COPS7A-220ENST00000544725 PREX1Q8TCU6 1659 aa24.4■■□□□ 1.5
COPS7A-220ENST00000544725 CEBPAP49715 358 aaPredicted RBP24.39■■□□□ 1.49
COPS7A-220ENST00000544725 CDK11AQ9UQ88 783 aaPredicted RBP24.39■■□□□ 1.49
COPS7A-220ENST00000544725 ATP1B4Q9UN42 357 aaPredicted RBP24.38■■□□□ 1.49
COPS7A-220ENST00000544725 ZNF518AQ6AHZ1 1483 aa24.36■■□□□ 1.49
COPS7A-220ENST00000544725 FMN1Q68DA7 1419 aa24.35■■□□□ 1.49
COPS7A-220ENST00000544725 MYO5CQ9NQX4 1742 aa24.35■■□□□ 1.49
COPS7A-220ENST00000544725 UHRF1BP1Q6BDS2 1440 aa24.34■■□□□ 1.49
COPS7A-220ENST00000544725 DISP3Q9P2K9 1392 aa24.31■■□□□ 1.48
COPS7A-220ENST00000544725 MYT1LQ9UL68 1186 aa24.31■■□□□ 1.48
COPS7A-220ENST00000544725 AFAP1Q8N556 730 aa24.3■■□□□ 1.48
COPS7A-220ENST00000544725 ARHGAP5Q13017 1502 aa24.29■■□□□ 1.48
COPS7A-220ENST00000544725 KDM5CP41229 1560 aa24.29■■□□□ 1.48
COPS7A-220ENST00000544725 KIF14Q15058 1648 aa24.28■■□□□ 1.48
COPS7A-220ENST00000544725 TROQ12816 1431 aaPredicted RBP24.27■■□□□ 1.48
COPS7A-220ENST00000544725 STRCQ7RTU9 1775 aa24.27■■□□□ 1.48
COPS7A-220ENST00000544725 UBTFP17480 764 aaKnown RBP24.27■■□□□ 1.48
COPS7A-220ENST00000544725 CLIP1P30622 1438 aa24.27■■□□□ 1.48
COPS7A-220ENST00000544725 SETD1BQ9UPS6 1966 aaKnown RBP24.26■■□□□ 1.47
COPS7A-220ENST00000544725 ESF1Q9H501 851 aaKnown RBP24.24■■□□□ 1.47
COPS7A-220ENST00000544725 REREQ9P2R6 1566 aa24.24■■□□□ 1.47
COPS7A-220ENST00000544725 DIP2CQ9Y2E4 1556 aa24.24■■□□□ 1.47
COPS7A-220ENST00000544725 ILDR2Q71H61 639 aa24.23■■□□□ 1.47
COPS7A-220ENST00000544725 PTPRTO14522 1441 aa24.23■■□□□ 1.47
COPS7A-220ENST00000544725 ARHGAP35Q9NRY4 1499 aa24.23■■□□□ 1.47
COPS7A-220ENST00000544725 MLH3Q9UHC1 1453 aa24.21■■□□□ 1.47
COPS7A-220ENST00000544725 SOCS7O14512 581 aa24.21■■□□□ 1.47
COPS7A-220ENST00000544725 EHMT2Q96KQ7 1210 aa24.2■■□□□ 1.46
COPS7A-220ENST00000544725 AGLP35573 1532 aa24.18■■□□□ 1.46
COPS7A-220ENST00000544725 TRAPPC8Q9Y2L5 1435 aa24.17■■□□□ 1.46
COPS7A-220ENST00000544725 ABCA6Q8N139 1617 aa24.17■■□□□ 1.46
COPS7A-220ENST00000544725 C3P01024 1663 aa24.15■■□□□ 1.46
COPS7A-220ENST00000544725 CNTLNQ9NXG0 1405 aa24.13■■□□□ 1.45
COPS7A-220ENST00000544725 CDC42BPBQ9Y5S2 1711 aa24.12■■□□□ 1.45
COPS7A-220ENST00000544725 ABCC1P33527 1531 aa24.11■■□□□ 1.45
COPS7A-220ENST00000544725 IQSEC2Q5JU85 1478 aa24.1■■□□□ 1.45
COPS7A-220ENST00000544725 SPATA31D1Q6ZQQ2 1576 aa24.1■■□□□ 1.45
COPS7A-220ENST00000544725 LTBP4Q8N2S1 1624 aa24.1■■□□□ 1.45
COPS7A-220ENST00000544725 NCOA1Q15788 1441 aa24.1■■□□□ 1.45
COPS7A-220ENST00000544725 PREX2Q70Z35 1606 aa24.09■■□□□ 1.45
COPS7A-220ENST00000544725 CCDC18Q5T9S5 1454 aa24.06■■□□□ 1.44
COPS7A-220ENST00000544725 ITSN2Q9NZM3 1697 aa24.05■■□□□ 1.44
COPS7A-220ENST00000544725 LRRIQ1Q96JM4 1722 aa24.05■■□□□ 1.44
COPS7A-220ENST00000544725 NPATQ14207 1427 aa24.04■■□□□ 1.44
COPS7A-220ENST00000544725 KIDINS220Q9ULH0 1771 aa24.03■■□□□ 1.44
COPS7A-220ENST00000544725 CASKIN1Q8WXD9 1431 aa24.01■■□□□ 1.43
COPS7A-220ENST00000544725 CAMSAP1Q5T5Y3 1602 aa23.99■■□□□ 1.43
COPS7A-220ENST00000544725 ZMYM3Q14202 1370 aa23.99■■□□□ 1.43
COPS7A-220ENST00000544725 MROH2AA6NES4 1674 aa23.98■■□□□ 1.43
COPS7A-220ENST00000544725 SPAG9O60271 1321 aaKnown RBP23.97■■□□□ 1.43
COPS7A-220ENST00000544725 SAMD9LQ8IVG5 1584 aa23.97■■□□□ 1.43
COPS7A-220ENST00000544725 ZNF777Q9ULD5 760 aaPredicted RBP23.97■■□□□ 1.43
COPS7A-220ENST00000544725 NCKAP5LQ9HCH0 1330 aa23.95■■□□□ 1.42
COPS7A-220ENST00000544725 CDC42BPAQ5VT25 1732 aa23.95■■□□□ 1.42
COPS7A-220ENST00000544725 ZNF335Q9H4Z2 1342 aaPredicted RBP23.92■■□□□ 1.42
COPS7A-220ENST00000544725 UBAP1LF5GYI3 381 aa23.92■■□□□ 1.42
COPS7A-220ENST00000544725 PKD2Q13563 968 aa23.92■■□□□ 1.42
COPS7A-220ENST00000544725 SYCP2Q9BX26 1530 aa23.91■■□□□ 1.42
COPS7A-220ENST00000544725 HNRNPMP52272 730 aaKnown RBP eCLIP23.91■■□□□ 1.42
COPS7A-220ENST00000544725 PLA2R1Q13018 1463 aa23.9■■□□□ 1.42
COPS7A-220ENST00000544725 FYCO1Q9BQS8 1478 aa23.89■■□□□ 1.42
COPS7A-220ENST00000544725 GPATCH8Q9UKJ3 1502 aaKnown RBP23.89■■□□□ 1.41
COPS7A-220ENST00000544725 SUPT6HQ7KZ85 1726 aaKnown RBP23.87■■□□□ 1.41
COPS7A-220ENST00000544725 KIAA1107Q9UPP5 1409 aa23.87■■□□□ 1.41
COPS7A-220ENST00000544725 ATP7AQ04656 1500 aa23.87■■□□□ 1.41
COPS7A-220ENST00000544725 A2MP01023 1474 aa23.87■■□□□ 1.41
COPS7A-220ENST00000544725 PLEKHH2Q8IVE3 1493 aa23.87■■□□□ 1.41
COPS7A-220ENST00000544725 PTPRKQ15262 1439 aa23.85■■□□□ 1.41
COPS7A-220ENST00000544725 MYO3AQ8NEV4 1616 aa23.85■■□□□ 1.41
COPS7A-220ENST00000544725 GGT6Q6P531 493 aa23.85■■□□□ 1.41
COPS7A-220ENST00000544725 TCOF1Q13428 1488 aaKnown RBP23.85■■□□□ 1.41
COPS7A-220ENST00000544725 PLXNC1O60486 1568 aa23.85■■□□□ 1.41
COPS7A-220ENST00000544725 ZNF142P52746 1687 aaPredicted RBP23.85■■□□□ 1.41
COPS7A-220ENST00000544725 CLTCQ00610 1675 aaKnown RBP23.85■■□□□ 1.41
COPS7A-220ENST00000544725 CEP170BQ9Y4F5 1589 aaPredicted RBP23.84■■□□□ 1.41
COPS7A-220ENST00000544725 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
COPS7A-220ENST00000544725 CFDP1Q9UEE9 299 aaPredicted RBP23.84■■□□□ 1.41
COPS7A-220ENST00000544725 PPP6R1Q9UPN7 881 aa23.83■■□□□ 1.41
COPS7A-220ENST00000544725 INO80Q9ULG1 1556 aaPredicted RBP23.82■■□□□ 1.4
COPS7A-220ENST00000544725 CCNB3Q8WWL7 1395 aa23.8■■□□□ 1.4
COPS7A-220ENST00000544725 A2ML1A8K2U0 1454 aa23.75■■□□□ 1.39
COPS7A-220ENST00000544725 MTUS2Q5JR59 1369 aa23.72■■□□□ 1.39
COPS7A-220ENST00000544725 ADGBQ8N7X0 1667 aa23.72■■□□□ 1.39
COPS7A-220ENST00000544725 SCAF1Q9H7N4 1312 aaKnown RBP23.7■■□□□ 1.38
COPS7A-220ENST00000544725 DNMT1P26358 1616 aaKnown RBP23.7■■□□□ 1.38
COPS7A-220ENST00000544725 TOM1O60784 492 aa23.69■■□□□ 1.38
COPS7A-220ENST00000544725 RTEL1-TNFRSF6BF6WH68 1400 aa23.67■■□□□ 1.38
COPS7A-220ENST00000544725 HSPA1LP34931 641 aa23.67■■□□□ 1.38
COPS7A-220ENST00000544725 PIP4K2BP78356 416 aa23.67■■□□□ 1.38
COPS7A-220ENST00000544725 CPS1P31327 1500 aa23.67■■□□□ 1.38
COPS7A-220ENST00000544725 DHX29Q7Z478 1369 aaKnown RBP23.66■■□□□ 1.38
COPS7A-220ENST00000544725 TNRQ92752 1358 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms