RNA–Protein interactions for RNA: ENST00000544583.6

ABR-205, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2 BASIC

Gene ABR, Length 5,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-205ENST00000544583 CCDC18Q5T9S5 1454 aa19.01■□□□□ 0.63
ABR-205ENST00000544583 WASHC2CQ9Y4E1 1318 aa19.01■□□□□ 0.63
ABR-205ENST00000544583 CYB5RLQ6IPT4 315 aa19■□□□□ 0.63
ABR-205ENST00000544583 SUPT16HQ9Y5B9 1047 aaKnown RBP19■□□□□ 0.63
ABR-205ENST00000544583 HSPA5P11021 654 aaKnown RBP19■□□□□ 0.63
ABR-205ENST00000544583 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
ABR-205ENST00000544583 RSPH4AQ5TD94 716 aa18.99■□□□□ 0.63
ABR-205ENST00000544583 RAB3GAP2Q9H2M9 1393 aa18.99■□□□□ 0.63
ABR-205ENST00000544583 ROCK2O75116 1388 aaKnown RBP18.98■□□□□ 0.63
ABR-205ENST00000544583 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
ABR-205ENST00000544583 PTPRGP23470 1445 aa18.95■□□□□ 0.62
ABR-205ENST00000544583 EID1Q9Y6B2 187 aa18.95■□□□□ 0.62
ABR-205ENST00000544583 CASC1Q6TDU7 716 aa18.95■□□□□ 0.62
ABR-205ENST00000544583 NUTM2DQ5VT03 806 aaPredicted RBP18.94■□□□□ 0.62
ABR-205ENST00000544583 OS9Q13438 667 aaPredicted RBP18.92■□□□□ 0.62
ABR-205ENST00000544583 BECN1Q14457 450 aa18.92■□□□□ 0.62
ABR-205ENST00000544583 CHMP4BQ9H444 224 aaKnown RBP18.92■□□□□ 0.62
ABR-205ENST00000544583 RTF1Q92541 710 aaKnown RBP18.91■□□□□ 0.62
ABR-205ENST00000544583 MS4A1P11836 297 aa18.9■□□□□ 0.62
ABR-205ENST00000544583 CSB-PGBD3P0DP91 1061 aa18.9■□□□□ 0.62
ABR-205ENST00000544583 KTN1Q86UP2 1357 aaKnown RBP18.88■□□□□ 0.61
ABR-205ENST00000544583 EIF3AQ14152 1382 aaKnown RBP18.87■□□□□ 0.61
ABR-205ENST00000544583 DDRGK1Q96HY6 314 aa18.86■□□□□ 0.61
ABR-205ENST00000544583 RGS3P49796 1198 aa18.85■□□□□ 0.61
ABR-205ENST00000544583 GAPVD1Q14C86 1478 aa18.85■□□□□ 0.61
ABR-205ENST00000544583 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
ABR-205ENST00000544583 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
ABR-205ENST00000544583 NCLP19338 710 aaKnown RBP18.84■□□□□ 0.61
ABR-205ENST00000544583 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.61
ABR-205ENST00000544583 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.61
ABR-205ENST00000544583 L3MBTL2Q969R5 705 aa18.83■□□□□ 0.6
ABR-205ENST00000544583 GOLGA2Q08379 1002 aa18.82■□□□□ 0.6
ABR-205ENST00000544583 RAD54L2Q9Y4B4 1467 aa18.81■□□□□ 0.6
ABR-205ENST00000544583 NGDNQ8NEJ9 315 aaKnown RBP18.81■□□□□ 0.6
ABR-205ENST00000544583 TERF2IPQ9NYB0 399 aa18.81■□□□□ 0.6
ABR-205ENST00000544583 ANP32EQ9BTT0 268 aa18.79■□□□□ 0.6
ABR-205ENST00000544583 NUTM2FA1L443 756 aa18.78■□□□□ 0.6
ABR-205ENST00000544583 GOLGA6L22H0YM25 854 aa18.78■□□□□ 0.6
ABR-205ENST00000544583 CCDC9Q9Y3X0 531 aaKnown RBP18.78■□□□□ 0.6
ABR-205ENST00000544583 PPP4R2Q9NY27 417 aa18.78■□□□□ 0.6
ABR-205ENST00000544583 CDK11BP21127 795 aaKnown RBP18.77■□□□□ 0.6
ABR-205ENST00000544583 CCER2I3L3R5 266 aa18.76■□□□□ 0.59
ABR-205ENST00000544583 TRAK1Q9UPV9 953 aa18.76■□□□□ 0.59
ABR-205ENST00000544583 ZNF330Q9Y3S2 320 aaPredicted RBP18.75■□□□□ 0.59
ABR-205ENST00000544583 IGF1RP08069 1367 aa18.75■□□□□ 0.59
ABR-205ENST00000544583 RALBP1Q15311 655 aa18.75■□□□□ 0.59
ABR-205ENST00000544583 NCAPD3P42695 1498 aa18.75■□□□□ 0.59
ABR-205ENST00000544583 KCNJ4P48050 445 aa18.75■□□□□ 0.59
ABR-205ENST00000544583 TAOK2Q9UL54 1235 aa18.74■□□□□ 0.59
ABR-205ENST00000544583 FGD1P98174 961 aa18.74■□□□□ 0.59
ABR-205ENST00000544583 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
ABR-205ENST00000544583 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.59
ABR-205ENST00000544583 FAM69CQ0P6D2 419 aa18.73■□□□□ 0.59
ABR-205ENST00000544583 CALD1Q05682 793 aaKnown RBP18.73■□□□□ 0.59
ABR-205ENST00000544583 TPRNQ4KMQ1 711 aa18.72■□□□□ 0.59
ABR-205ENST00000544583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.71■□□□□ 0.58
ABR-205ENST00000544583 ZRSR1Q15695 479 aaKnown RBP18.7■□□□□ 0.58
ABR-205ENST00000544583 IPO8O15397 1037 aaKnown RBP18.69■□□□□ 0.58
ABR-205ENST00000544583 AMPHP49418 695 aa18.69■□□□□ 0.58
ABR-205ENST00000544583 B4GALNT3Q6L9W6 998 aa18.69■□□□□ 0.58
ABR-205ENST00000544583 VGFO15240 615 aaPredicted RBP18.68■□□□□ 0.58
ABR-205ENST00000544583 NAP1L2Q9ULW6 460 aaPredicted RBP18.67■□□□□ 0.58
ABR-205ENST00000544583 LTV1Q96GA3 475 aaPredicted RBP18.66■□□□□ 0.58
ABR-205ENST00000544583 UACAQ9BZF9 1416 aa18.66■□□□□ 0.58
ABR-205ENST00000544583 APBB1O00213 710 aa18.65■□□□□ 0.58
ABR-205ENST00000544583 TULP1O00294 542 aaPredicted RBP18.63■□□□□ 0.57
ABR-205ENST00000544583 STK31Q9BXU1 1019 aa18.62■□□□□ 0.57
ABR-205ENST00000544583 ST20-MTHFSA0A0A6YYL1 179 aa18.62■□□□□ 0.57
ABR-205ENST00000544583 CHMP4AQ9BY43 222 aa18.61■□□□□ 0.57
ABR-205ENST00000544583 HSP90AB1P08238 724 aaKnown RBP18.6■□□□□ 0.57
ABR-205ENST00000544583 ITPRIPQ8IWB1 547 aa18.6■□□□□ 0.57
ABR-205ENST00000544583 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
ABR-205ENST00000544583 NLRP13Q86W25 1043 aa18.58■□□□□ 0.56
ABR-205ENST00000544583 RCAN3Q9UKA8 241 aa18.58■□□□□ 0.56
ABR-205ENST00000544583 GRIN2BQ13224 1484 aa18.57■□□□□ 0.56
ABR-205ENST00000544583 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
ABR-205ENST00000544583 MINK1Q8N4C8 1332 aaPredicted RBP18.57■□□□□ 0.56
ABR-205ENST00000544583 ZNF644Q9H582 1327 aaPredicted RBP18.56■□□□□ 0.56
ABR-205ENST00000544583 EVC2Q86UK5 1308 aa18.56■□□□□ 0.56
ABR-205ENST00000544583 TRIM44Q96DX7 344 aaPredicted RBP18.55■□□□□ 0.56
ABR-205ENST00000544583 PRDM2Q13029 1718 aa18.55■□□□□ 0.56
ABR-205ENST00000544583 MCCP23508 829 aa18.55■□□□□ 0.56
ABR-205ENST00000544583 PANK3Q9H999 370 aa18.55■□□□□ 0.56
ABR-205ENST00000544583 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
ABR-205ENST00000544583 SMC4Q9NTJ3 1288 aa18.54■□□□□ 0.56
ABR-205ENST00000544583 NESP48681 1621 aa18.54■□□□□ 0.56
ABR-205ENST00000544583 COG3Q96JB2 828 aa18.54■□□□□ 0.56
ABR-205ENST00000544583 ISY1Q9ULR0 285 aaKnown RBP18.53■□□□□ 0.56
ABR-205ENST00000544583 CHMP3Q9Y3E7 222 aa18.53■□□□□ 0.56
ABR-205ENST00000544583 TMX4Q9H1E5 349 aaPredicted RBP18.52■□□□□ 0.56
ABR-205ENST00000544583 KIF15Q9NS87 1388 aa18.52■□□□□ 0.55
ABR-205ENST00000544583 DHX57Q6P158 1386 aaKnown RBP18.52■□□□□ 0.55
ABR-205ENST00000544583 PTMAP06454 111 aaKnown RBP18.5■□□□□ 0.55
ABR-205ENST00000544583 SLC4A10Q6U841 1118 aa18.5■□□□□ 0.55
ABR-205ENST00000544583 MRC2Q9UBG0 1479 aa18.5■□□□□ 0.55
ABR-205ENST00000544583 RWDD1Q9H446 243 aaPredicted RBP18.5■□□□□ 0.55
ABR-205ENST00000544583 CGNL1Q0VF96 1302 aa18.5■□□□□ 0.55
ABR-205ENST00000544583 TAF7LQ5H9L4 462 aa18.49■□□□□ 0.55
ABR-205ENST00000544583 HSCBQ8IWL3 235 aa18.49■□□□□ 0.55
ABR-205ENST00000544583 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms